Mmes002810.1
Basic Information
- Insect
- Mechanitis messenoides
- Gene Symbol
- dmd-4
- Assembly
- GCA_959347415.1
- Location
- OY365759.1:27585829-27590547[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-25 8.9e-22 77.3 9.4 1 47 7 53 7 53 0.98 2 2 1 7.1e+03 -2.4 5.4 3 11 277 285 275 286 0.88
Sequence Information
- Coding Sequence
- ATGAATAGTGGCCGAGCCCGTGTTCCGAAGTGCGCTCGGTGTCGGAACCATGGTCTCATCTCAAGTCTAAGAGGGCACAAGAAGTCATGTGCGTATCGAGACTGCCAGTGTCCGAAGTGCGGATTAATAAAAGAACGACAGAGGATAATGGCGGCCCAGGTTGCCTTAAAAAGGCAGCAAGCAGCGGAAGATAAGATAGCCCTTCATCTGGCGTCTGTGGAGAGTGGCACAGCTCTAGCCTCGCTACCTCCCGGTCGTATCTACGGCATGCGAGTCACTGGCCCTTCGCCAAGCGCTGGCCCGGAGCCCGACTCAGCTGCTGATGATCACAGTCCTATCCACATCGACAGCGAGACGAGTGACTCTTTACCTGATTGTTGTAACGGTACTCAAGACTCCGACGGCAATTCCAATGCAGCCACACGCTCCTGtgctGAAAATGAAGAAAGTACAAGCAATGTTAGTTCAGCGGGACTGGAAATGCTGAGGAAGTTGTTTCCTGGCAAAAAGAGATCAGTTCTTGAACTAGTGTTACGACGATGTAACCATGATCTGCTGCGTGCTGTGGAGCACTGCAACACTATacacgcTCAACGCGATAAATCTTCAGCTGGTTCAAGCTCTCATTTCGAAACTGTGTCAAGTTCGCAAGAGGTAGAGTCACGTTGGTCAGCTTTCCGGCCTGTGGGACCGCGTGCCCCTCTGCTGTCAACACTAGTGATGGGTCGTGTATGTGGTTCAGAGTGGCTTGTGCCCCTCCCAGCACTCCCAGCGCTGTCGGGGCCGTTGTTGCTACCCTTGCAGCACCACGCCCCGCCGGCCTGTGCCCCTGACTGCAGACAATGCAATAGCCATCACTAG
- Protein Sequence
- MNSGRARVPKCARCRNHGLISSLRGHKKSCAYRDCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTALASLPPGRIYGMRVTGPSPSAGPEPDSAADDHSPIHIDSETSDSLPDCCNGTQDSDGNSNAATRSCAENEESTSNVSSAGLEMLRKLFPGKKRSVLELVLRRCNHDLLRAVEHCNTIHAQRDKSSAGSSSHFETVSSSQEVESRWSAFRPVGPRAPLLSTLVMGRVCGSEWLVPLPALPALSGPLLLPLQHHAPPACAPDCRQCNSHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00958709; iTF_00959451; iTF_00801894; iTF_00954511; iTF_01091985; iTF_00642362; iTF_01181930; iTF_00775299; iTF_00778049; iTF_00782687; iTF_00780292; iTF_00774533; iTF_00247238; iTF_00723110; iTF_00159885; iTF_00213492; iTF_00248127; iTF_00212512; iTF_00458092; iTF_00781071; iTF_00781874; iTF_00779546; iTF_00621277; iTF_00205166; iTF_01017778; iTF_01021277; iTF_00796558; iTF_00953553; iTF_01018610; iTF_01033782; iTF_00461606; iTF_01034636; iTF_00419031; iTF_00421411; iTF_00896857; iTF_00985146; iTF_01080762; iTF_01078256; iTF_01079939; iTF_00986149; iTF_01508111; iTF_01506389; iTF_00843580; iTF_01079103; iTF_01507264; iTF_00457277; iTF_00353119; iTF_00354134;
- 90% Identity
- iTF_00419031;
- 80% Identity
- -