Nio023418.1
Basic Information
- Insect
- Nymphalis io
- Gene Symbol
- dmd-4
- Assembly
- GCA_905147045.1
- Location
- LR989900.1:8326442-8335235[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-25 1.1e-21 76.9 9.4 1 47 7 53 7 53 0.98 2 2 0.78 5e+03 -2.0 5.6 2 11 283 292 282 293 0.89
Sequence Information
- Coding Sequence
- ATGAATAACGGTCGGGCCCGTGTACCGAAATGTGCTCGGTGTCGAAATCATGGTCTTATATCTAGTCTACGTGGCCACAAAAAGGCATGTGCCTATCGAGATTGTCAGTGCCCCAAGTGCGGATTGATAAAGGAGAGACAAAGGATCATGGCTGCTCAGGTCGCTTTAAAAAGACAGCAAGCCGCTGAAGATAAAATAGCTTTGCACTTAGCTTCGGTTGAGAGTGGAACAGCAATGGAGGCTTTACCACCCGGTCGTATATATGGTATGCGTGTTACGGGCCCCTGTCCTAGTCCTGGTCCTGAACCAGATTCTGCTGTCGATGATCAAACTCCTATACACATCGATAGCGAGACGAGTGATTCTCTGCCGGACTGCTGCAGTGTGACCCCCGATTCCGTCGGAAACGCTAATATAGCGACGCGATCATGCATCGATTCGAATGACGAAAGTACAAGCAGCGTGAGTTCTGCGGGGTTGGAGATGTTACGTAAGCTGTTTCCCGGGAAGAAGCGATCTGTGTTGGAGCTGGTGCTGCGACGATGTAATCACGACCTGCTCCGCGCTGTTGAGCACTGCAACGCCATACATGCCCATCGGGACAAAACTTCTGCTGGCATTGGTTCAAGCTCGAGTCTTAGATTTGAGTCAGTATCAAGTTCAGAAGAGGTAGAAACTAGATGGTCTGCTTTTCGCCCCGTTGGGCCTAGAGCGCCATTACTACCTACGCTAGTGATGGGCCGAGTTTGTGGCTCGGAATGGTTGGTACCTCTACCTGCGCTTCCTACACTATCTGCTCCGCTACTGTTGCCGCTTCAGCATCCACATGCCCCACCTACATCTTGTACACCTGATTGCAGACAGTGTAACAGCCATCATTAA
- Protein Sequence
- MNNGRARVPKCARCRNHGLISSLRGHKKACAYRDCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTAMEALPPGRIYGMRVTGPCPSPGPEPDSAVDDQTPIHIDSETSDSLPDCCSVTPDSVGNANIATRSCIDSNDESTSSVSSAGLEMLRKLFPGKKRSVLELVLRRCNHDLLRAVEHCNAIHAHRDKTSAGIGSSSSLRFESVSSSEEVETRWSAFRPVGPRAPLLPTLVMGRVCGSEWLVPLPALPTLSAPLLLPLQHPHAPPTSCTPDCRQCNSHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00960212;
- 90% Identity
- iTF_01080762;
- 80% Identity
- -