Basic Information

Gene Symbol
dmd-4
Assembly
GCA_015832385.1
Location
JACTOM010000045.1:1008733-1016318[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-25 1.2e-21 76.9 9.4 1 47 7 53 7 53 0.98
2 2 0.97 5.6e+03 -2.0 5.6 2 11 281 290 280 291 0.89

Sequence Information

Coding Sequence
ATGAATAACGGTCGGGCAAGGGTCCCAAAATGTGCGAGATGTAGAAACCATGGTCTAATTTCCAGTCTCCGAGGCCATAAGAAGGCCTGCGCATATCGAGATTGTCAATGCCCTAAATGTGGGTTGATAAAGGAACGTCAGAGGATAATGGCTGCTCAGGTTGCCTTAAAAAGACAACAGGCCGCCGAAGATAAGATAGCGTTGCATTTAGCATCGGTCCAGAGTGGCACTGCATTAGAATCATTGCCGCCAGGCCGAATATATGGCATGCGGGTCACTGGGCCATGCCCTAGTCCAGGACCTGAACCTGATTCTGCTCTAGAAGATCACGCACCAATTCATATAGATAGCGAGACAAGTGATTCTCTTCCTGAATGTTGTAATGTAACGCCTGATTCTGCCAGCAGTTCCAGTATTGCGTCACGGCCATGTGTCGGTGTTAACGATGAAAGTTCCGGTGTGAGTTCTGCTGGGCTGGAAATGTTGAGGAAACTGTTTCCTGGCAAGAAGCGCTCCGTCTTAGAACTCGTGTTGCGACGGTGTAATCACGACCTACTCCGTGCTGTCGAACATTGCAACGCTATTCATGCTCAGCGGGATAAGTCAAGTACTGGCATTGGAACAAGCAATTCGAGGTATGATACTTCAGTCTCCAGTACTGAGGAGTTTGAATCACGTTGGTCTGCTTTTCGTCCAGTAGGACCCAGAGCGCCTTTGTTACCCACGTTAGTTATGGGACGTGTTTGTGGGTCTGACTGGCTAGTTCCCCTACCAGCGTTACCAGCCCTGTCTACACCGTTACTACTACCACTACAGCATCCACATACCCCACCTTCTTGTACTCCTGATTGTAGACAGTGTAACAGTCACCACTAA
Protein Sequence
MNNGRARVPKCARCRNHGLISSLRGHKKACAYRDCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVQSGTALESLPPGRIYGMRVTGPCPSPGPEPDSALEDHAPIHIDSETSDSLPECCNVTPDSASSSSIASRPCVGVNDESSGVSSAGLEMLRKLFPGKKRSVLELVLRRCNHDLLRAVEHCNAIHAQRDKSSTGIGTSNSRYDTSVSSTEEFESRWSAFRPVGPRAPLLPTLVMGRVCGSDWLVPLPALPALSTPLLLPLQHPHTPPSCTPDCRQCNSHH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00960212;
90% Identity
-
80% Identity
-