Mpay019769.1
Basic Information
- Insect
- Meandrusa payeni
- Gene Symbol
- -
- Assembly
- GCA_029286785.1
- Location
- JAGSMX010000039.1:415125-422478[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.7e-11 7.3e-08 32.4 0.0 2 39 172 210 171 214 0.88 2 4 2.6e-11 3.3e-08 33.5 0.1 2 39 226 263 225 266 0.94 3 4 1.8e-14 2.3e-11 43.6 0.1 4 45 283 325 280 325 0.96 4 4 2.4e-18 3.1e-15 56.0 0.0 1 43 332 375 332 376 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCTACGGACCGTCCCAAGTGAAGTGCGAGCCCCCGTCAGATGGAGAAGACAGCAATTCCCAGTTTGCACATAGCTTTCTGCCAGATCAGcTCACGAGCGGCGAGCTGCTCACGGTGAAAGTGGAAGTTGCTGAGCAGCCTGAACACGATGCTTCATCGCACATACTGCAGCACTTACAGGTGGGGCGCGAGTTGGAGCTGACACCGCCGGCCCCGGCCGCGCCCGCCGCCACGCCGGTAAGCGCGCGCCGAGGCCCGCCGCCGCAAGCCTCGCCCGATACCTTTGAAACTCTCGAGCCCGCCCGCGCTGCCACCGGCACCACACTCCTGGACCGCCACATGAGGTTACTGAGCGCGAGTGTTGTCGAGCCAGACTTCATTCCTCTGTTGCCGATTAAGGACGAGCCGTTGTCGGAGGGTGAACAGCAACAGCTAAGCGACGACGCCAGCGACTGTGGCGCTGCCGGCGAGGGGACGGAGCCCCGCGGGAGCCCCAAGAGCTGGTCGCCGCGGGACATGGAGCGCGCGCTGCAGGCACTGCGCGACCGCCGCATGAGCCTCACCAAGGCATCGGCGACGTACGGCATCCCGTCCACCACTCTGTGGCAGCGCGCCCACCGGCTGGGCATCGACACGCCGAAGAAGGACGGCGGCGCCAAGAGCTGGAGCGACGACGACCTGCGCGCCGCGCTGGGCTCCCTGCGTGCCGGCACGCTCTCCGCCAACAAGGCCAGCAAGGCTTACGGTATTCCCAGCAGCACGCTGTACAAGATCGCCCGGCGCGAGGGCATCCGGCTGGCGGCGCCCTTCAACGCGGCGCCCACGTCCTGGCGGCGCAGCGACCTGCAGCGTGCGCTGGCCGCCATCCGCTGCGGCGCCGCCTCCGTGCAGCGCGCCGCCGCCCAGTTCGGCATACCCACTGGTACTCTGTACGGACGATGCAAGCGGGAAGGAATCGAGCTGTCGCGCTCCAACCCCACACCGTGGTCGGAGGACGCGATGGGCGAGGCGCTGGAGGCTGTCAGAGTCGGCCAGATGTCCATCAACCAGGCGGCGATACACTTCAACCTGCCCTACTCTTCGCTGTACGGGAGGTTCAAGCGGTGCAAGTACCAGGCGCAAGGTCTACAATCCAACCAACAGACGGAAATGCAGCAAAGCATCGAAATGGAACATCAAAATGTACAGCAGAGCCACGACTCTCTCTCCTACTACCACTCGTTTCCGTCGGCGCTGCACACCGTGGCCGAGGAGCCGACCAACTTGCAGATCCCGTACAGCCAACTGCTGGGCGAGGTCCACGACACCATGCACGGCCACGGCCTCCACGACCAGTACGGGGGGCAGGGACTTTACTACACTCAGGGTTGCTACAGCGGGGTCGCCACCAGTTGA
- Protein Sequence
- MPGYGPSQVKCEPPSDGEDSNSQFAHSFLPDQLTSGELLTVKVEVAEQPEHDASSHILQHLQVGRELELTPPAPAAPAATPVSARRGPPPQASPDTFETLEPARAATGTTLLDRHMRLLSASVVEPDFIPLLPIKDEPLSEGEQQQLSDDASDCGAAGEGTEPRGSPKSWSPRDMERALQALRDRRMSLTKASATYGIPSTTLWQRAHRLGIDTPKKDGGAKSWSDDDLRAALGSLRAGTLSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWRRSDLQRALAAIRCGAASVQRAAAQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYQAQGLQSNQQTEMQQSIEMEHQNVQQSHDSLSYYHSFPSALHTVAEEPTNLQIPYSQLLGEVHDTMHGHGLHDQYGGQGLYYTQGCYSGVATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00204288; iTF_01337691; iTF_01402653;
- 90% Identity
- -
- 80% Identity
- -