Basic Information

Insect: Maniola hyperantus
Gene Symbol: -
Assembly: GCA_902806685.1
Location: NC:2889997-2903218[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.3 2.4e+02 2.0 0.1 2 23 127 148 126 148 0.93

2 18 2.8 1.1e+02 3.1 0.3 2 23 152 174 151 174 0.94

3 18 0.013 0.49 10.5 0.9 2 23 412 434 411 434 0.96

4 18 0.018 0.71 10.0 0.3 1 20 442 461 442 463 0.95

5 18 0.15 5.9 7.1 2.2 2 23 473 494 472 494 0.93

6 18 1.2 47 4.3 0.9 1 23 510 533 510 533 0.88

7 18 0.013 0.52 10.4 3.3 1 23 542 565 542 565 0.94

8 18 0.22 8.5 6.6 0.8 2 23 641 663 640 663 0.91

9 18 5.7 2.2e+02 2.1 1.9 1 23 668 691 668 691 0.89

10 18 3.6e-05 0.0014 18.5 1.9 1 23 697 719 697 719 0.96

11 18 1.5e-06 6e-05 22.8 0.8 1 23 726 748 726 748 0.98

12 18 8.9e-05 0.0034 17.3 2.3 1 23 753 775 753 775 0.96

13 18 0.00067 0.026 14.5 1.8 1 23 781 803 781 803 0.99

14 18 2.5e-06 9.5e-05 22.2 1.5 1 23 809 831 809 831 0.97

15 18 6e-05 0.0023 17.8 1.4 2 23 842 863 842 863 0.97

16 18 0.0006 0.023 14.7 0.3 2 23 871 893 870 893 0.97

17 18 0.0021 0.079 13.0 1.1 1 23 898 920 898 920 0.98

18 18 0.074 2.9 8.1 4.7 1 23 926 949 926 949 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.3	2.4e+02	2.0	0.1	2	23	127	148	126	148	0.93
2	18	2.8	1.1e+02	3.1	0.3	2	23	152	174	151	174	0.94
3	18	0.013	0.49	10.5	0.9	2	23	412	434	411	434	0.96
4	18	0.018	0.71	10.0	0.3	1	20	442	461	442	463	0.95
5	18	0.15	5.9	7.1	2.2	2	23	473	494	472	494	0.93
6	18	1.2	47	4.3	0.9	1	23	510	533	510	533	0.88
7	18	0.013	0.52	10.4	3.3	1	23	542	565	542	565	0.94
8	18	0.22	8.5	6.6	0.8	2	23	641	663	640	663	0.91
9	18	5.7	2.2e+02	2.1	1.9	1	23	668	691	668	691	0.89
10	18	3.6e-05	0.0014	18.5	1.9	1	23	697	719	697	719	0.96
11	18	1.5e-06	6e-05	22.8	0.8	1	23	726	748	726	748	0.98
12	18	8.9e-05	0.0034	17.3	2.3	1	23	753	775	753	775	0.96
13	18	0.00067	0.026	14.5	1.8	1	23	781	803	781	803	0.99
14	18	2.5e-06	9.5e-05	22.2	1.5	1	23	809	831	809	831	0.97
15	18	6e-05	0.0023	17.8	1.4	2	23	842	863	842	863	0.97
16	18	0.0006	0.023	14.7	0.3	2	23	871	893	870	893	0.97
17	18	0.0021	0.079	13.0	1.1	1	23	898	920	898	920	0.98
18	18	0.074	2.9	8.1	4.7	1	23	926	949	926	949	0.97

Sequence Information

Coding Sequence: ATGGCATCTGACGAGTCAGACGATGAACCGCTATCAATTCTGGCGGCAGCTAAAAAGGAAAACCCTGAAGAGTTCGAAGATCAGGAACCGGTTGGAACGAAGACCAGATACGAAGAATCTGACAGTGATTACGAAGtgcctaaaaagaaaaagaagaagaaaaagccTCCACCTCTTAAAAAGCTAGGAGTTACTATAAAGATCAATCGTAAATTGAACACTATCATTGCCCCTCCTGTAATAGCTAGGCCAACTGATGTGTGGCTTTACTTGAAGGATCTGAACCCGACCGGTCCTTACAGCTGCTTGCTGTGCCCCGACTGGTTCATAAATCGGTCCAAAATGATTCTACATTATGCATTGAACCATAAGAAGGACTATTGTGGGATTTGCAGATACTTTGTGCCAGACAGAGAAGCCTGGTTTGAGCATGAAAAGTTTCATTCACCATGGCCATGCTCGCAATGCATTGAGACATTCTCAACCGAACGGTTATCACGGAATCACCTAAAATCTGCACACAATCTAGTTCATTGCCGCCTATGTCACTTCAGAGTCACTGCAGATGCTGACTACAACTCCCATCTATTCCAAAAGCATGGAGTAACAAATGTAGCATCAAAGGATGAGGAATTTCTCTGGGAAATAGATTCAGAATACCCTGATAAATTTTTCTGCTTATTATGCATTAAAACTGAAAGTGTATCACCGTATAATGTAACAACATTTTTTGGCCATTTTATGGGTATTCATCACTTTACTTTAAAATGTTTGGCAAATATTATAGCAGGGAGAGATACACCTTTTTTGGTCAATGGAGCCGAAGTCAGTGACCGTTTCCTTCAACAGCAACTAAAAGAATACGGTAGACTTGGATATGTAGATCTAGAACCGAGGAATTTCATACCCTTTCAGGAGCCAGTTGAATTTAAACCTAATACAGTATTAATACCAGAGGTTAAAGAGGAGAACCTGAGTGACACAGATGATAAAGTAGAAGAAAAAGGGAATGATAATGAAATGAGTGAAAAGGATGAGAATAGTCAAAACGACGAAACCATAGACTATCAAGGAGACGAAGACTTTGATATAACCCACACAGAGGTTATACTCTTTGCAAAATGTTATCACGAATACATAGATAAATCTCTCAATAATATTAACAACAAAACTGTACCTGTAGTCTCCCATATAGAGTACGGAATGATGACAGGCGacattgatattgatattgaGTGTTCTGTCTGCAAAAGTAAATTCGAAAATGCCCAATCATTTACGACACATCTAAATAAAATGCATAGTATTAAAACAGTACCCCTATTTTCATGTAGAGTATGTGCAACAACATTTGACACTTATACAGAGTTAACTAAACACGTAACTGAGGAGTTAGGTGACTTTGAAGATTTATGGATATGTCAGTTTTGTGACAAGGAATTTGATAATAGGGAACAGTGCAGAACACATTTAACCGAGCATTGGACTTCTTTGGATTTCGATAACTGTTTCAGCCCACATTTAGGGTTTAAATGTAAATACTGTCCGATGTTATTTTGGAATGAAACTGAGAGGGAAACACATCAGACTAGAGTGCACTTCAGTAAATATAAGGAtgaattttataaatgtgaCAGTTGTTCTACAACTTTTAGTGATAAGgtttggTACATTCACCATCACATAGAAAACCATTCAAATGAAGAACAGCCAATCTACTTAATTAAGTGCTGTCTTTGTTGCACCGTGGAACCCAGTGTAGATAAAATGAGGAACCATTTTGAAGACCAACATCCAGAGATCAGAAAACTTTATTGCTCCTTAGACGCTTGTATGTTCAAACCTTTGAGTCACAGAAAGTCTTTCAAATTACATGTGAAgATGATCCACGGCCCATCAGCAAAGACGGACAAACCAGTAAGCTGCAATATATGCAGCCGTGAGTTCGTGAGCGCTCGCTCGTGCAGCACTCACATGGCGCAAGTTCACGGCCCGGGCAAGTTCAAATGCAAGCTGTGTCAAGAAGTTCTGCAAACTATTGACGAAAGGAAACTCCACTACCTCCTCTGCCACCCTGGCCGTCACCCGTTCGAGTGCAACGAGTGTGGCAAGTCGTTCCAGTACAAGTCGTCCCTGTACATGCACAAGCAAGACCACCAGCCCAACAAGCAGAGCTACACTTGCAACTACTGCGGGAAAGTGTTTGCCAAAAAGGATTCATACCGCGAGCACGTCCAAATCCACGAGGGTCCGCGGCACGCGTGCTCGTATTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGTTGCGGCACGAGCGGCGCCACACCGGCGAGCGGCCCTATCGCTGCGCGCACTGTCCGCGCGCCTTCGCGGACAAGGGCGCTTGCACAGCCCATACCAGAACGCATGTAAGAGATACCTCGTTTGCTTGTTTGTACTGCGGGCAGACGTTTGTCCAGAAGTCCAAGCTTACATACCATATCCGGAAACATACAGGTGAAAAACCTGTTTCAGACCTGGAGTCGTGCACGGTGTGCGCGAAGGTGTTCACGAGCGCGTGCGCGCTGCGGGAGCACATGAAGACACACGTGGAAAAGAGACAGATCGTCAAGTGCCCTTTGTGTGATAAGGGCTATCAAGACGAGCGCTACATGCTCCGTCACTTGCGCACCATGCACACCCGCGCGCAGTTCTCCTGTCCACTGTGCCACAAGCTCCTGACCAGCGCCGCGGGGCTGCGGCACCATGTTATCACACATAGCAAGATTAACTCCTTCCGGTGTAAATGCTGTCCAAAAACCTACGCCGTAAAAAGAACAATGATAAAACATCTACGCAAACGACACGGCCTTAGGGGCACTGAAGTTGACTTGAAAGACTACTTCACCCGGATAGAACCAAGGGATTGCGAACTTAACCTCGACGAAGCAACCATGAACAACATATTCGGACCTCCCAAACTGAAAGTTCCCAATTTACTGATTAGTAACTTCGTAAATTTCGCGGACCAACCTAAAGTGGTTGATAATGCTGCTACTGATGAAGGTGATGATTCAGAAGAAGAGAATGAAAAtgataatgaaaataatgataCAACTGAAGTTAATGAGAGTGAAAAGGAAAGCAATGATGAAAAAGAGACAGAGCTACAGATAAAAGTAGAAGTACATAGTGGCGATGAGGAATTAGAGCCGACAGACTTTGTTAGTGTCAAAATTGAGCATATGGATGAAGATCAGGAATAG
Protein Sequence: MASDESDDEPLSILAAAKKENPEEFEDQEPVGTKTRYEESDSDYEVPKKKKKKKKPPPLKKLGVTIKINRKLNTIIAPPVIARPTDVWLYLKDLNPTGPYSCLLCPDWFINRSKMILHYALNHKKDYCGICRYFVPDREAWFEHEKFHSPWPCSQCIETFSTERLSRNHLKSAHNLVHCRLCHFRVTADADYNSHLFQKHGVTNVASKDEEFLWEIDSEYPDKFFCLLCIKTESVSPYNVTTFFGHFMGIHHFTLKCLANIIAGRDTPFLVNGAEVSDRFLQQQLKEYGRLGYVDLEPRNFIPFQEPVEFKPNTVLIPEVKEENLSDTDDKVEEKGNDNEMSEKDENSQNDETIDYQGDEDFDITHTEVILFAKCYHEYIDKSLNNINNKTVPVVSHIEYGMMTGDIDIDIECSVCKSKFENAQSFTTHLNKMHSIKTVPLFSCRVCATTFDTYTELTKHVTEELGDFEDLWICQFCDKEFDNREQCRTHLTEHWTSLDFDNCFSPHLGFKCKYCPMLFWNETERETHQTRVHFSKYKDEFYKCDSCSTTFSDKVWYIHHHIENHSNEEQPIYLIKCCLCCTVEPSVDKMRNHFEDQHPEIRKLYCSLDACMFKPLSHRKSFKLHVKMIHGPSAKTDKPVSCNICSREFVSARSCSTHMAQVHGPGKFKCKLCQEVLQTIDERKLHYLLCHPGRHPFECNECGKSFQYKSSLYMHKQDHQPNKQSYTCNYCGKVFAKKDSYREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCAHCPRAFADKGACTAHTRTHVRDTSFACLYCGQTFVQKSKLTYHIRKHTGEKPVSDLESCTVCAKVFTSACALREHMKTHVEKRQIVKCPLCDKGYQDERYMLRHLRTMHTRAQFSCPLCHKLLTSAAGLRHHVITHSKINSFRCKCCPKTYAVKRTMIKHLRKRHGLRGTEVDLKDYFTRIEPRDCELNLDEATMNNIFGPPKLKVPNLLISNFVNFADQPKVVDNAATDEGDDSEEENENDNENNDTTEVNESEKESNDEKETELQIKVEVHSGDEELEPTDFVSVKIEHMDEDQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00954907; iTF_01021567; iTF_01151465; iTF_01092317; iTF_00802153; iTF_00354400;
90% Identity: iTF_00954907;
80% Identity: -