Basic Information

Insect: Maniola jurtina
Gene Symbol: -
Assembly: GCA_905333055.1
Location: HG995222.1:2703225-2713312[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0032 0.15 13.0 0.1 2 23 153 175 152 175 0.95

2 17 0.02 0.91 10.5 0.9 2 23 413 435 412 435 0.96

3 17 0.011 0.53 11.2 0.3 1 20 443 462 443 464 0.95

4 17 0.24 11 7.1 2.2 2 23 474 495 473 495 0.93

5 17 1.9 86 4.3 0.9 1 23 511 534 511 534 0.88

6 17 0.036 1.7 9.6 3.2 1 22 543 564 543 566 0.90

7 17 0.45 21 6.2 0.9 3 23 643 664 641 664 0.91

8 17 8.8 4.1e+02 2.1 1.9 1 23 669 692 669 692 0.89

9 17 5.5e-05 0.0026 18.5 1.9 1 23 698 720 698 720 0.96

10 17 2.4e-06 0.00011 22.8 0.8 1 23 727 749 727 749 0.98

11 17 0.00014 0.0063 17.3 2.3 1 23 754 776 754 776 0.96

12 17 0.00056 0.026 15.3 2.8 1 23 782 804 782 804 0.99

13 17 3.8e-06 0.00017 22.2 1.5 1 23 810 832 810 832 0.97

14 17 3.2e-05 0.0015 19.2 2.1 2 23 843 864 843 864 0.97

15 17 0.00092 0.042 14.7 0.3 2 23 872 894 871 894 0.97

16 17 0.0032 0.15 13.0 1.1 1 23 899 921 899 921 0.98

17 17 0.079 3.6 8.6 4.6 1 23 927 950 927 950 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0032	0.15	13.0	0.1	2	23	153	175	152	175	0.95
2	17	0.02	0.91	10.5	0.9	2	23	413	435	412	435	0.96
3	17	0.011	0.53	11.2	0.3	1	20	443	462	443	464	0.95
4	17	0.24	11	7.1	2.2	2	23	474	495	473	495	0.93
5	17	1.9	86	4.3	0.9	1	23	511	534	511	534	0.88
6	17	0.036	1.7	9.6	3.2	1	22	543	564	543	566	0.90
7	17	0.45	21	6.2	0.9	3	23	643	664	641	664	0.91
8	17	8.8	4.1e+02	2.1	1.9	1	23	669	692	669	692	0.89
9	17	5.5e-05	0.0026	18.5	1.9	1	23	698	720	698	720	0.96
10	17	2.4e-06	0.00011	22.8	0.8	1	23	727	749	727	749	0.98
11	17	0.00014	0.0063	17.3	2.3	1	23	754	776	754	776	0.96
12	17	0.00056	0.026	15.3	2.8	1	23	782	804	782	804	0.99
13	17	3.8e-06	0.00017	22.2	1.5	1	23	810	832	810	832	0.97
14	17	3.2e-05	0.0015	19.2	2.1	2	23	843	864	843	864	0.97
15	17	0.00092	0.042	14.7	0.3	2	23	872	894	871	894	0.97
16	17	0.0032	0.15	13.0	1.1	1	23	899	921	899	921	0.98
17	17	0.079	3.6	8.6	4.6	1	23	927	950	927	950	0.97

Sequence Information

Coding Sequence: ATGGCATCTGACGAGTCCGACGATGAACCGCTTTCAATTCTGGCGGCAGCTAAAAAGGAAAACCCTGAAGAGTTCGAAGATCAGGATTCGGCTGGAACTAAGACCAGATACGAAGAATCCGACAGTGATTACGAAGTGCCTAAAAAGAAAAAGAAGAAGAAGAAAAAGCCTCCGCCCCTTAAAAAGCTAGGCGTTACTATAAAGATCAATCGTAAATTGAACACTATCATTGCCCCACCCGTGATAGCTAGGCCCACTGATGTGTGGCTTTATTTGAAGGATCTGAACCCAACCGGCCCTTACAGCTGCTTGCTGTGCCCTGACTGGTTCATAAATAGGTCCAAAATGATTCTACATTATGCTTTGAATCATAAGAAGGACTATTGTGGGATTTGCAGATACTTTGTGCCAGACAGAGAAGCCTGGTATGAGCACGAAAAGTTTCATTCACCATGGCCATGCTCGCAATGCGTTGAGACATTCCCAACCGAACAGCTACTACGTAATCACCTCAAATCTGTACACAACCTAGTTCATTGCCGCCTATGTCACTTCAGAGTCACCGCTGATGCTGACTACAATTCCCATTTATTCCAAAAGCATGGGGTGACAAACGTAGCTTCAAAGGACGAGGAATTCCTCTGGGAAATAGATTCAGAATACCCTGATAAATTTCTCTGTTTACTATGCATTAAATCTGAAAACGTATCACCGTTTAGTGTAACAACATTTTTTGGCCATTTTATGGGTATTCATCACTTTACTTTAAAATGTTTGGCAAATATTATAGCAGGGAGAGATACACCTTTTTTAGTCAATGGAGCGGAAGTCAGTGATCGTTTCCTTCAACAGCAGTTAAAAGAATATGGTAGACTTGGATATGTAGATCTAGAATCAAGGAGTTTCATACCGTTTCAGGAGCCAGTAGAATTCAAACCAAGTACAGTATTAATACCAGAGGTTAAAGAGGAGAACCAGAGTGACACAGATGATAAAGTAGAAGAAAAAGGAAATGATAATGAAATGAGTGAAAAGGATGAGAATAGTCAAAACGACGAAACCATAGACTATCAAGGCGACGAAGACTTTGATATAACCCACACAGAAGTCATACTCTTTGCAAAATGCTATCACGAATACATAGACAAGTCTCTCAATAATATTAACAACAAAACTGTACCTGTAGTCTCTCATATAGAGTATGGAATGATGACAGGCGACATTGATATTGACATTGAGTGCTCTGTCTGCAAAAGTAAATTCGAAAATGCCCAATCGTTTACAACACATTTAAATAAAATGCATAGTATTAAAACTGTACCTTTATTTTCATGTAGAGTATGTGCAACAACCTTTGACACATATACAGAGTTAACTAAACACATTACTGAGGAGTTAGGTGACTTTGAAGATTTATGGATATGTCAGTTTTGTGACAAAGAATTTGACAATAGAGAACAGTGCAGAACACATTTGACCGAGCATTGGACATCTTTGGATTTTGACAACTGTTTCAGTCCACACTTAGGATTTAAATGTAAATACTGCCCGATGTTATTTTGGAATGAAACAGAGAGGGAAACACATCAGACTAGAGTGCACTTCACTAAATATAAGGATGAATTTTATAAATGTGACAGTTGTTCTACAACTTTTAGTGATAAGGTATGGTACATTCACCATCATGTAGAAAACCATTCAAATGAAGAACAGCCGATCTATTTAATTAAGTGCTGTCTTTGTTGCACAGTGGAGCCTAGTGTGGATAAAATGAGGAGCCATTTTGAAGACCAGCACCCGGAGATCAGAAAACTTTATTGTTCCTTAGACGCTTGTATGTTCAAACCTTTGAGTCACAGAAAGTCATTCAAATTACATGTGAAGATGATCCATGGCCCATCAGCAAAGACGGACAAACCAGTGAACTGTAATATATGTAGCCGCGAGTTTGTGAGTGCTCGCTCGTGTAGCACTCACATGGCGCAAGTGCATGGCCCGGGCAAGTTCAAATGCAAGCTGTGTCAAGAAGTTCTGCAAACTATTGACGAAAGGAAACTCCATTACCTCCTCTGCCACCCCGGTCGTCACCCATTCGAATGCAACGAGTGTGGCAAGTCCTTCCAGTACAAGTCATCCCTGTACATGCACAAGCAGGACCACCTGCCCAACAAACAGAGCTACACTTGTAACTACTGTGGGAAAGTATTTGCAAAAAAGGATTCATACCGCGAGCACGTACAAATCCACGAGGGTCCACGACACGCGTGCTCGTATTGCCCCATGCGCTTCGTGCAACGCTCCAACATGTTGCGACACGAGCGCCGCCATACGGGCGAGCGGCCCTACCGCTGCACGCACTGCCCACGCGCCTTCGCGGATAAGGGCGCTTGCACAGCCCATACCAGAACGCATGTAAGAGATACTTCATTCGCTTGTTTGTACTGCGGGCAGACGTTTGTCCAGAAATCCAAGCTTACATACCATATACGGAAACATACAGGTGAAAAGCCTGTTTCAGACCTGGAGTCATGCACAGTGTGCTCGAAGGTGTTCACCAGCGCGTGCGCGCTGCGGGAGCACATGAAGACCCACGTGGAAAAGAGACAGATTGTCAAGTGCCCTTTGTGTGATAAAGGCTATCAAGACGAGCGTTACATGCTCCGTCACTTGCGCACCATGCACACCCGGGCGCAGTTCTCTTGTCCACTGTGCCACAAGCTCCTAACCAGCGCCGCGGGGTTGAGGCACCATGTTATTACTCATAGCAAGATTAATTCATTCCGGTGTAAATGTTGTCCGAAAACCTACGCCGTAAAGAGAACAATGATAAGGCACCTACGTAAACGACACGGCCTTAGGGGCACAGAGGTTGACTTGAAAGACTACTTCACCCGGATAGAACCAAGGGATTGCAAACTTAACCTCGACGAAGCAACCATGACCAGTATATTCGGACCTCCCAAAATGAAAGTCCCCAATTTATTGATTAGCAACTTTGTAAATTTCGCGAACCAACCCAAATTGGCTGATAATGCTGCTGCTACTGATGAAGGAGATGAGTCAGAGGAAGAGAATGAAAATGAAAATGAAAATGAAAATAATGATGCAACTGAAGCTAATGAGAGTGAAAAGGAAAGCAATGATGAAAAAGAGAAAGAGCTACCAATAAAAGTAGAAGTACAGAGTGGTGATGAGGAATTAGAGCCGACAGACTTTGTTAGTGTAAAAATCGAACATATCGATGAAGATTAA
Protein Sequence: MASDESDDEPLSILAAAKKENPEEFEDQDSAGTKTRYEESDSDYEVPKKKKKKKKKPPPLKKLGVTIKINRKLNTIIAPPVIARPTDVWLYLKDLNPTGPYSCLLCPDWFINRSKMILHYALNHKKDYCGICRYFVPDREAWYEHEKFHSPWPCSQCVETFPTEQLLRNHLKSVHNLVHCRLCHFRVTADADYNSHLFQKHGVTNVASKDEEFLWEIDSEYPDKFLCLLCIKSENVSPFSVTTFFGHFMGIHHFTLKCLANIIAGRDTPFLVNGAEVSDRFLQQQLKEYGRLGYVDLESRSFIPFQEPVEFKPSTVLIPEVKEENQSDTDDKVEEKGNDNEMSEKDENSQNDETIDYQGDEDFDITHTEVILFAKCYHEYIDKSLNNINNKTVPVVSHIEYGMMTGDIDIDIECSVCKSKFENAQSFTTHLNKMHSIKTVPLFSCRVCATTFDTYTELTKHITEELGDFEDLWICQFCDKEFDNREQCRTHLTEHWTSLDFDNCFSPHLGFKCKYCPMLFWNETERETHQTRVHFTKYKDEFYKCDSCSTTFSDKVWYIHHHVENHSNEEQPIYLIKCCLCCTVEPSVDKMRSHFEDQHPEIRKLYCSLDACMFKPLSHRKSFKLHVKMIHGPSAKTDKPVNCNICSREFVSARSCSTHMAQVHGPGKFKCKLCQEVLQTIDERKLHYLLCHPGRHPFECNECGKSFQYKSSLYMHKQDHLPNKQSYTCNYCGKVFAKKDSYREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCTHCPRAFADKGACTAHTRTHVRDTSFACLYCGQTFVQKSKLTYHIRKHTGEKPVSDLESCTVCSKVFTSACALREHMKTHVEKRQIVKCPLCDKGYQDERYMLRHLRTMHTRAQFSCPLCHKLLTSAAGLRHHVITHSKINSFRCKCCPKTYAVKRTMIRHLRKRHGLRGTEVDLKDYFTRIEPRDCKLNLDEATMTSIFGPPKMKVPNLLISNFVNFANQPKLADNAAATDEGDESEEENENENENENNDATEANESEKESNDEKEKELPIKVEVQSGDEELEPTDFVSVKIEHIDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00953823;
90% Identity: iTF_00953823;
80% Identity: -