Basic Information

Insect: Hipparchia semele
Gene Symbol: -
Assembly: GCA_933228835.1
Location: CAKOGE010000010.1:2535958-2546523[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.3 3.3e+02 2.4 0.1 2 23 126 147 125 147 0.93

2 18 0.00094 0.049 14.4 0.1 2 23 151 173 150 173 0.96

3 18 0.017 0.87 10.5 0.9 2 23 411 433 410 433 0.96

4 18 0.027 1.4 9.8 0.2 1 20 441 460 441 462 0.95

5 18 0.0063 0.34 11.8 0.8 2 23 472 493 471 493 0.94

6 18 2.2 1.2e+02 3.8 0.7 1 23 509 532 509 532 0.80

7 18 0.0063 0.33 11.8 3.5 1 22 541 562 541 564 0.90

8 18 0.032 1.7 9.6 0.9 3 23 642 663 640 663 0.92

9 18 8 4.2e+02 2.1 2.3 1 23 668 691 668 691 0.89

10 18 0.00011 0.0061 17.3 2.4 1 23 697 719 697 719 0.96

11 18 3e-06 0.00016 22.3 0.8 1 23 726 748 726 748 0.98

12 18 0.00012 0.0061 17.3 2.3 1 23 753 775 753 775 0.96

13 18 0.0005 0.027 15.3 2.6 1 23 781 803 781 803 0.99

14 18 2.4e-06 0.00012 22.6 1.4 1 23 809 831 809 831 0.98

15 18 2.7e-05 0.0014 19.3 2.1 2 23 838 859 838 859 0.97

16 18 0.00078 0.041 14.7 0.3 2 23 867 889 866 889 0.97

17 18 0.0027 0.14 13.0 1.1 1 23 894 916 894 916 0.98

18 18 0.06 3.1 8.7 4.5 1 23 922 945 922 945 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.3	3.3e+02	2.4	0.1	2	23	126	147	125	147	0.93
2	18	0.00094	0.049	14.4	0.1	2	23	151	173	150	173	0.96
3	18	0.017	0.87	10.5	0.9	2	23	411	433	410	433	0.96
4	18	0.027	1.4	9.8	0.2	1	20	441	460	441	462	0.95
5	18	0.0063	0.34	11.8	0.8	2	23	472	493	471	493	0.94
6	18	2.2	1.2e+02	3.8	0.7	1	23	509	532	509	532	0.80
7	18	0.0063	0.33	11.8	3.5	1	22	541	562	541	564	0.90
8	18	0.032	1.7	9.6	0.9	3	23	642	663	640	663	0.92
9	18	8	4.2e+02	2.1	2.3	1	23	668	691	668	691	0.89
10	18	0.00011	0.0061	17.3	2.4	1	23	697	719	697	719	0.96
11	18	3e-06	0.00016	22.3	0.8	1	23	726	748	726	748	0.98
12	18	0.00012	0.0061	17.3	2.3	1	23	753	775	753	775	0.96
13	18	0.0005	0.027	15.3	2.6	1	23	781	803	781	803	0.99
14	18	2.4e-06	0.00012	22.6	1.4	1	23	809	831	809	831	0.98
15	18	2.7e-05	0.0014	19.3	2.1	2	23	838	859	838	859	0.97
16	18	0.00078	0.041	14.7	0.3	2	23	867	889	866	889	0.97
17	18	0.0027	0.14	13.0	1.1	1	23	894	916	894	916	0.98
18	18	0.06	3.1	8.7	4.5	1	23	922	945	922	945	0.97

Sequence Information

Coding Sequence: ATGACATCTGACGAGTCAGACGATGAACCGCTATCGATTTTGGCGGCAGCTAAAAAGGAAAACCCTGAACAATTCGAAGATGAGGACCCGGTTGATCCGAAGGCTCGATACGAAGAATCCGACAGTGATTACGAAGTgccaaaaaagaagaagaaaaagaagccTCCGCCTTTGAAAAAGCTAGGCGTCACTATCAAGATCAATCGTAAACTGAACACTATTATCGCCCCACCCGTGATAGCAAGACCCACTGATGTCTGGCTTTATTTGAAAGACCTGAACCCCACAGGCCCGTACAGCTGCTTGCTGTGCCCCGACTGGTTCATTAATCGCTCCAAAATGATTCTACATTATGCTTTGAACCATAAGAAGGATTATTGTGGGATTTGCAGATACTTTGTACCAGATAGAGAGACTTGGTATGCCCATGAAAAATTTCATTCTCCGTGGCCATGCTCGCAATGTGTTGAGACATTCGCAACTGAAAACCTTCTACGTAATCACCTAAGATCAGTACACAACCTAGTTCACTGCCGGCTGTGTCACTTCAGAGTCACAGCAGATGCTGACTACAATTCACATCTCTTCCAAAAGCATAGTGTAACAAATGTAGCCTCAAAAGATGAGGAATTCCTCTGGGAAATAGATTCAGAATGCCCTGAAAAATTTGCCTGCTTACTATGTATTAAAACTGAAAACTCAACACCTTTTAGTGTAACAACATTTTTTGGCCATTTCATGGGTATACATCACTTTACATTGAAATGTATGGCTAATATTATAGCCGGTAGGGATACACCCTTTTTGGTAAATGGAGCAGAGGTCAGTGATCGATTCTTGCAACAGCAGTTAAAAGAGTATGGTAGACTGGGATATGTAGACCTGGAACCGAGGAGCTTTATACCATTTCCAGAGCCAGTTGAATTCAAACCAAATACAGTATTAATACCAGAGATTAAAGAGGAGAGTCCTAGTGACACAGATGATAAAGTTGAAAAAGGAAACGACAATGTACCAAGTGAGAAGGATGAGAATAGTCAAAATGATGAAACAACTATAGACTATGATGGAGAAGAAGACTTTGATATAACACACACAGAGATAATACTCTTTGAAAAATGTTATTATGAGTACATAGATAAATCACTCAACCATATTAATGACAGAACAGTACCTATTGAGTCTCATATAGATTATGAAACTATAAAAGGCGACATTGATATAGATATTGAATGTTCTGTCTGCAAAAGCAAATTTGAAAATGCACAGTCATTTACCACACATCTAAATAAGATGCACAGTATTAAAACAATACCTCTTTTCTCATGCAGAGTATGTGCGACAACCTTTGACACTTATACAGAGTTAAGTAAACACATAACTGAGGAGTTAGGTGATTTTGAAGATCTGTGGATTTGTCAGTTTTGTGACAAAGAGTTTGACAATAGGGAACAGACAAGAAAGCATTTAACTGAGCATTGGACTTCTTTGGACTATGACAACTGTTTCAGCCCACATCTTGGCTTCAAATGTAAATATTGCCCGACATTATTTTGGAATGAAATTGAAAGAGAAACACATCAGACTAGAGTGCACTTCAATAAATATAAGGAAGAATTCTATAAATGTGAGAGTTGCTCTAAAACTTTTAGTGATAAGGTATGGTACATCCACCATCATGTAGAAAATCATTCAAGTGAAGAAGAGCAGCCAATATATCTAATAAAGTGCTGTCTTTGCTGCATAGTGGAGCCCAGTGTTGATAAAATGAGAAACCATTTTGAAGACCAACATCCGGAGATCAGAAAACTTTATTGTTCTTTAGACGCTTGTATGTTCAAACCTCTGAGTCACAGAAAGTCATTCAAATTACATGTAAAGATGATCCACGGCCCATCAGCGAAGACTGATAAACCAGTAAACTGTAATATATGTGGCCGCGAGTTTGTGAGTTCGCGGTCTTGCAGCACTCATATGGCGCAAGTTCACGGCCCGGGCAAGTTCAAATGCAAACTGTGTAAAGAAGTCCTACAGACTATTGACGAGAGaaaacTCCACTACCTGCTCTGCCATCCGGGTCGCCATCCGTTCGAATGCAACCAGTGCGGAAAGTCGTTCCAGTACAAGTCGTCCCTCTACATGCACAAACAAGACCACCTGCCCAATAAACAGAGCTACACTTGTAGTTATTGCGGTAAAGTGTTTGCGAAAAAGGATTCGTACCGCGAACACGTGCAGATCCACGAGGGTCCGCGGCACGCGTGCTCGTATTGCCCCATGCGGTTCGTGCAGCGCTCGAACATGCTGCGACACGAGCGCCGGCACACGGGCGAGCGGCCCTACCGCTGCTCGCACTGTCCGCGAGCATTCGCCGACAAGGGGGCCTGCACTGCGCACACCAGGACACATGTAAGGGATACTTCATACGCTTGCTTGTACTGCGGGCAGACATTTGTTCAGAAGTCCAAGCTTACGTACCACATAAGGAAACATACTGGAGAAAATCTGGAGTCGTGCACCGTTTGCTCGAAGGTGTTCACCAGCGCGTGCGCGCTGCGTGAACATATGAAGACGCATGTGGAAAAGAGACAGATTGTGAAATGCCCTCTGTGCGataAGGGCTACCAAGACGAGCGCTACATGCTCCGTCACCTGCGCACCATGCACACTCGGGCGCAGTTCTCGTGTCCCCTGTGCCACAAGCTGCTGACCAGCGCCGCCGGGCTGCGGCACCACGTCATCACGCATAGCGACATCAACACGTTCCAGtgtaaATGTTGTCCTAAAACCTATGCAGTGAAGAGGACAATGATAAAGCATCTACGTAAACGTCACGGTCTAAGAGGGACAGAGGTCGACTTGAAAGATTACTTCACCCGTATAGAACCAAGGGATTGCAAACTAAATCTTGACGAAGCAACCATGACCAGCATATTTGGACCTCCCAAATTAAAAGTTCCCGACATATTGCTCAGTAATTTTGTCAATTTCGCGGACCAATCTAAATTGGCTGATAACATTGGCACTGATGAAGGAGATGATTCGGAggaagaaaatgaaaataacgAGACAACTGAAGCCAATGAGAGTGAAAAGGAAAGCAATGATGAAAAGGAAAAAGAGCCAAAGATAAAGCAAGAAGTACAGAGTTCTGATGAGGAATTAGAACCAACAGACTTTGTTAGTGTTAAAATAGAACATATGGATGATGATCAAGAATAG
Protein Sequence: MTSDESDDEPLSILAAAKKENPEQFEDEDPVDPKARYEESDSDYEVPKKKKKKKPPPLKKLGVTIKINRKLNTIIAPPVIARPTDVWLYLKDLNPTGPYSCLLCPDWFINRSKMILHYALNHKKDYCGICRYFVPDRETWYAHEKFHSPWPCSQCVETFATENLLRNHLRSVHNLVHCRLCHFRVTADADYNSHLFQKHSVTNVASKDEEFLWEIDSECPEKFACLLCIKTENSTPFSVTTFFGHFMGIHHFTLKCMANIIAGRDTPFLVNGAEVSDRFLQQQLKEYGRLGYVDLEPRSFIPFPEPVEFKPNTVLIPEIKEESPSDTDDKVEKGNDNVPSEKDENSQNDETTIDYDGEEDFDITHTEIILFEKCYYEYIDKSLNHINDRTVPIESHIDYETIKGDIDIDIECSVCKSKFENAQSFTTHLNKMHSIKTIPLFSCRVCATTFDTYTELSKHITEELGDFEDLWICQFCDKEFDNREQTRKHLTEHWTSLDYDNCFSPHLGFKCKYCPTLFWNEIERETHQTRVHFNKYKEEFYKCESCSKTFSDKVWYIHHHVENHSSEEEQPIYLIKCCLCCIVEPSVDKMRNHFEDQHPEIRKLYCSLDACMFKPLSHRKSFKLHVKMIHGPSAKTDKPVNCNICGREFVSSRSCSTHMAQVHGPGKFKCKLCKEVLQTIDERKLHYLLCHPGRHPFECNQCGKSFQYKSSLYMHKQDHLPNKQSYTCSYCGKVFAKKDSYREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCSHCPRAFADKGACTAHTRTHVRDTSYACLYCGQTFVQKSKLTYHIRKHTGENLESCTVCSKVFTSACALREHMKTHVEKRQIVKCPLCDKGYQDERYMLRHLRTMHTRAQFSCPLCHKLLTSAAGLRHHVITHSDINTFQCKCCPKTYAVKRTMIKHLRKRHGLRGTEVDLKDYFTRIEPRDCKLNLDEATMTSIFGPPKLKVPDILLSNFVNFADQSKLADNIGTDEGDDSEEENENNETTEANESEKESNDEKEKEPKIKQEVQSSDEELEPTDFVSVKIEHMDDDQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00953823;
90% Identity: iTF_01092317;
80% Identity: -