Basic Information

Gene Symbol
ARID5B
Assembly
GCA_902806685.1
Location
NC:575493-638184[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-11 6e-08 32.5 0.4 3 89 309 382 307 382 0.89

Sequence Information

Coding Sequence
ATGGAGAAACCTTCTTATAAGTTGGTCGGAACGCCGTGCGGTCAACACGGACAATACACGTTCTACAAGGCGATCCGACTGACAGGCCCCCGGGAGAGGATATACGCCATCGGGGACTTCTTCTTCGTCAGGATATGGCAGGACTCCGAGCTGGTTTCCATTGGTGAACTACAACTCCTGTGGACGGACCGAGTCTCCGACCAGACCCTGGTGTCCGTGAGGCTGTACTGCCTCCCCGAGAACACGCCAGACGGCAGGGGCTTACATGGAGAGGACGAAGTCCTAGCCATCAACGACAAAGTGGTGCTCCGAGCGGAGGACCTGCTGAGCTGGGTGTGTTCGGGCGCCGGCTGGCGCTGGGGGCTGCGCGCTGTGTGGCGAGGGGCCTGCGCGCCGCCGGCGGAGCCCCAGCCCACTGCGCCGCTGCACCACACCAAGCTCGACTTCAGCGATGTCGACCGCGAGAAAAGCGCCATCTCTGTGGACGTGGAAGCGCCAGGAGTGGTGGTGTTCTCATACCCTCGGTACTGCCGCTACCGGGCCCTGCTGGCGCGGCTGGAGGGGATACAGGCGGACTGGCTTCGGGACTCGCTAGTGGCCGCGTTGGGGGGCTACGCAGCGCCCACTAAGAACACTAGGATATTGTACTGCAAGGACACATTCGAGTACCCGGAGCTAGAAGGGCACGAGTTTGTCTGTAACCATCTAGCTCCTAAACTGAAGGGCAGACCGCGCGGTCGGCGGAGGCGCGCGCCGCGCTCGCGGTCACGCTCGCGGTCACCGGACTCGCGGTCAAGTGACAGTGAGGCGAGAAACACTCCCGAGACCAAGACACCAAGAAGGCTCTCCCTCCGCAACGGACCAGAGAAGCAGAgcgaggaagaagaagaagtggaGAAGAAGCCGGAGGAAGTTGCGAAGGACAAAGCGTTCGAGCAGCAGCTGAAAGACTTCTTCACGAGAAAGGGACAAACCCTGAAGATATCGCATAGCGTCAAAAACGTGTCATTGCGAAGTCTATACGTGGCCGTCGTGTCCGTGGGAGGCTACGAGGCGGCTTGCCGTGGACAGTTCTGGAGGCGCCACTATAATGAGAAGGCTTCCAAAGTGCGACGGTTATATGAGAGATACCTGCTACAATTCGAGCACCACGAGAGATGGAACGGCAGGAAATTCCCCAAACTGCCCAACGGCAAGCTAACCGAACCAAAGACCATAGACACGATAGACGTCACAGACTCGCCCGTACGAGACATAGACAAACCAAAACAACTCCCAGAGAAAAGGCTAAGAACACCCTCACCGAAAAAGCAAGAAAAACTAGTTCTAGACAATGAAACTGGAGAATTATTGAAAGAAGAACTAAATATCACATCAAAACCTGCCGAAGAACTAAACAGAGAATTCCTAGATTCCTTACCACCCAAAGAAGAAGAGAAGGCGGTGAAGATTTTCGTGAAACCCGTGGAAAAGCTGATAGAGCCGAGTTTGAAGGAAAATGTCGTTAAGATATTCGAAGAGAATACGGCTCTGATGTCGGAATTGACTAAGCAGAAATTGATGGACTCTAGCAAGAGTGTAGAGGCGAATATGAGTGAAGGGAACAGCAGGTTTCTGAATGAACTTGCGCAGAAGTTGCATTTAGGTAACGCGGACACCAGGTTCCTGCAGCATCTGTCACACAGTCAGTCGACGGACAGTCTGTCGAGTCTGTCGTCTTTGGGAGATAAGTACACCAACGGACATACCAACGGCACCAATAACGCTGAACAGAAGGCCCGTCCCGCGGGGCGGAGCTCCCTGCGCGCCGTGCGAGTCAAGCCCACGCGACCCATGACTGCCAGACAAACGCCGCCAGTGCCCCCTCCTCGCTCGGACTCCGCGTCATCATCCCCCACGCTGTCGGCCGCCACCACCCCACTGTCCACGCCCAGCGCTGGCCCCACCACCACCGCGACCACCACCATCACCAACTTCGGCATCCACcacccgccgccgcccgccaccAGCGATGACGACATAGTCGAGGTACCCTACCAACCAAAGAGCCCAGAAATCATAGACCTTGACGAATACCCCGAGAGCCCGCAAGGAATCAAGAAGAAAAAGCTGGAAATCCTCAAAGAAAGGGGCCTCGAAGTCACCGCGGTCCCTCCTAGCCCCGTGTGGCCCCCACTCGCCAACCCCATCACCCCCCTCATCAACCCCAACCCCATAATCCTAAACCCCGCAGTACAGCATCAGATCCTCACCCAAGCGCAAATGTTTCAAATGTACAATATCATTCCAAATTACCCCAACGGGGTCCAAGCCCCCAAAGTCATTCAAGCTTCAAGCGCTTTCGGGAACGCGGGACCCGAAAAAACCGTTTACGGCAACCCCAAAGACCCCTTCATGCCCCCACCGCATGTCCTCCAAGGCACCCCAATAAAACCACAAAGGAGTATTGCCACCCCTGTACCAACCCCTCAAGACATTTTAGACTTGACATGCAAAACCCAAGCAACCCCATCCCAAAAACCAGCCGTAGAAATTGTCAGAATCCCCTCCGATTCCACCCCATCCCCCTCCAAAACCCAAAACCCCCAAAACCTAAGCAAAAACTATACAATCCTAGACGGTAAAGCAGTCGTATCAAACCTAGAAATCACATTGGTCAACCCAAAGTCCCAAACGCCACCGAAAAAACCCCCCCAAAAACGGTCTTCAAACGGCAAATTCGCGTCGCTCAAAACGCCGACCCCTCCCAAAGATTACCCTAAATCATTCCCGACCCCTTCCCCTAAAAAACCCCCAATAACCGTCCCTAGTTATCAAATTACTAAAGAGGAATCCCCTAGCAGTTCCACACAAACTCAAAACAAAGATTTGAGTTTACAGAACAGTTTACTCCAAAacgttttcaaaaatcaaaacttaGCGCAAATGATGGAAATGCAGAAGGTCCCTATGGCCCCATTAATGGACCCTTTATATATGCAACATATATACAGCAGTCTTGGCCAAATGGACCAAAGGCAGTTGGCCATGTACAGGGACTTTATGACCAATCAGTTCAGGGGATACACGGGGCTACTAAACATGGCGACGCCGACAACGAAGAATTAG
Protein Sequence
MEKPSYKLVGTPCGQHGQYTFYKAIRLTGPRERIYAIGDFFFVRIWQDSELVSIGELQLLWTDRVSDQTLVSVRLYCLPENTPDGRGLHGEDEVLAINDKVVLRAEDLLSWVCSGAGWRWGLRAVWRGACAPPAEPQPTAPLHHTKLDFSDVDREKSAISVDVEAPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAPRSRSRSRSPDSRSSDSEARNTPETKTPRRLSLRNGPEKQSEEEEEVEKKPEEVAKDKAFEQQLKDFFTRKGQTLKISHSVKNVSLRSLYVAVVSVGGYEAACRGQFWRRHYNEKASKVRRLYERYLLQFEHHERWNGRKFPKLPNGKLTEPKTIDTIDVTDSPVRDIDKPKQLPEKRLRTPSPKKQEKLVLDNETGELLKEELNITSKPAEELNREFLDSLPPKEEEKAVKIFVKPVEKLIEPSLKENVVKIFEENTALMSELTKQKLMDSSKSVEANMSEGNSRFLNELAQKLHLGNADTRFLQHLSHSQSTDSLSSLSSLGDKYTNGHTNGTNNAEQKARPAGRSSLRAVRVKPTRPMTARQTPPVPPPRSDSASSSPTLSAATTPLSTPSAGPTTTATTTITNFGIHHPPPPATSDDDIVEVPYQPKSPEIIDLDEYPESPQGIKKKKLEILKERGLEVTAVPPSPVWPPLANPITPLINPNPIILNPAVQHQILTQAQMFQMYNIIPNYPNGVQAPKVIQASSAFGNAGPEKTVYGNPKDPFMPPPHVLQGTPIKPQRSIATPVPTPQDILDLTCKTQATPSQKPAVEIVRIPSDSTPSPSKTQNPQNLSKNYTILDGKAVVSNLEITLVNPKSQTPPKKPPQKRSSNGKFASLKTPTPPKDYPKSFPTPSPKKPPITVPSYQITKEESPSSSTQTQNKDLSLQNSLLQNVFKNQNLAQMMEMQKVPMAPLMDPLYMQHIYSSLGQMDQRQLAMYRDFMTNQFRGYTGLLNMATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2