Cgly021615.1
Basic Information
- Insect
- Coenonympha glycerion
- Gene Symbol
- arid5b
- Assembly
- GCA_963855885.1
- Location
- OY979651.1:814578-825461[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-12 2.6e-08 34.8 0.2 3 89 254 327 252 327 0.89 2 2 7 2.2e+04 -3.5 0.1 7 26 932 949 930 960 0.72
Sequence Information
- Coding Sequence
- ATGTACATGCTTGTCGTCAAGCTCGCCTCGGAATCTGTTATACGTATCTCCGTACCGTATCTATCTTTTATTTTCGATAGTAATATGATGATAACCATGATCGTGATGGATGAAGTGCTCGCGATCAACGACAAGGTGGTGCTGCGAGCAGAGGACCTGCTGAGCTGGGTGTGCTGCGGCGCGGGCTGGCGCTGGGGGCTGCGCGCGGTGTGGCGCGGTGCCTGCGCCCCGCCCGCCGAGGCCGCGCCGCCCACGCAGCCGCTGCACCACACGCGGCTGGACTTTAGCGACATCGACAAGGAAAAGAGCGCCATCAGTGTGGACGAGGAGTCTCCAGGAGTGGTGGTGTTCTCGTACCCGCGCTACTGCCGGTACCGCGCGCTGCTGGCGCGGCTGGAGGGCATCCAGGCGGACTGGCTTCGGGACTCGCTAGTGGCCGCGCTGGGTGGCTACGCGGCGCCCACCAAGAACACCAGGATATTGTACTGTAAGGACACATTCGAGTACCCGGAGTTGGAAGGCCACGAGTTCGTGTGCAACCACCTCGCGCCGAAGCTGAAGGGGCGGCCGCGGGGGCGGCGGCGGAGGGCGCCGCGCTCCCGCTCCCGCTCCCGCTCCCCCGACTCGCGCTCCAGCGACAGCGACAGGAACACCCCCGACACTAAGACTCCAAGGAGGCTGTCCCTCCGAAACGGTCCGGAGAAGCAGAGCGAGGAAGAAGATGAAGTTGAGAAGAAGCCTGAAGAAGCGGCGAAGGACGAGGCGTTCCTGCAGCAGCTGAGGAACTTCGCCACGAGGAAGGGAGAGACGCTCAAGATTACGCATAGCGTTAAACATGTGTCGCTGCGCAGTCTGTACGTGGCGGTGGTGTCGGTCGGAGGCTACGAGGCGGCGTGCCGCAGTCAGTTTTGGCGACGAGGATACAACGAGAAGGCGTCCAAAGTGCGCCGGTTGTATGAGAGATACCTCCTCCAATTCGAGAACCACGAGAGGTGGAACGGAAGAAAGTTCCCGAGACTACCGAACGGAAGGCTAATACCAGAACCAAAGACCATAGACACGATCGAAGTCACAGACTCGCCCGTCCGAGACATAGACAACAAACCACACCTCCCGGAGAAGCGACTGCGGACCCCATCGCCAAAGAAACCAGAAAATCCAGAGAAAACCGAGACAACCCCAGAGAAACACGAGAAACTAGTACTAGACAATGAAACCGGAGAATTAATGAAAGAAGAACTGAATATAACTTCCAAACCCGCGGAAGAATTGAATAGAGAATTCTTAGAATCCCTCCCACCGAAAGACGAAGAAAAATCTGATAGAACGGAGAAAACTGAAAAAACGGAGAAATCGGAGAAGCCTGTTAAAATCTTCGTCAAACCAGTGGAGAAGTTAATAGAGCCGAGTCTGAAGGAGAATGTAGTTAAAATTTTCGAAGAAGACACCGCGTCGGCTAAACATACATTGACGGACTCTAGCAAAAGTGTAGACGACAAAAATGATGGGGGCAGGTTTCTGAACGAATTGGCGCAGAAATTGCATTTAGGTAACTCCGACACGCGCTTTCTGCAGCACCTCTCCCAGAGCCAGTCCGCGTCCGCCGACAGCCTCTCCAGCTTATCTTCACTGGGAGACAAGTATACGAACGGGCACGCCAACGTCGAGCAGAAGAGTCGTCCGGCTCCGACGGGGCGCAGCTCGCTTCGCGCAGTGCGCGTGAAGCCCGCGCGCGGCTCCAGCGCGCGACACACGCCGCCAGTGCCGCCTCCCCTATCGGACTCCGCGTCGTCGTCTCCCCCGCTCACGAGCGTGGTCACCACGCCCACGCCCACGCCCACGCCCGCGCCCACGGCCACGCCCAGCTACACCGTCACCAACTTCGGCATCCACCACCCGCGACCCACTTCACACAGCGATGACGAAATCGTGGAGGTGCCCTACCAACCAAAGAGTCCCGAGATCATCGATCTGGATGAATACCCGGAGTCCCCGCAGGGCATCAAGAAGAAGAAGCTGGACATCCTCAAAGAGAGGGGCCTGGAGGTGACCGCCGTGCCGCCCGGCCCCGTGTGGCCCCTCGCCAACCCCATCACGCCCCTCATCAGCCCCAACCCCATCATCCTCAACCCCGTCCAGCACCAGATCCTAACCCAAGCGCAGATGTTCCAGATGTACAGCATCATACCCAACTACCCCAACGGCGCGCCTGCCCCTAAGGTCATACAAGCCTCCAGCGCTTTTGGCAACGCGGGCCCCGAGAAAACCGTCTACGGCAACCCCAAAGACCCCTTCATGCCGCCCCCACACGTCATACAAGGGACCCCCATAAAACCCCAACGGAGTATCACTACAATAGGCAACACGCCGACTCCCCCAGATCTCCTAGACCTTACATGCAAAACGCAAAAACCAGCTGTGGAAATAGTCAAAATCCCCTCCGACTCAACCCCCTCACCGTCCAAAACTAACCCTCAAAACTTAAGCAAAAACTACACCCTCCTAGACGGAAAAGCGGTCGTCTCCAACTTAGAAATTACGTTAGTAAACCCCAAACCCCAAACCCCCCCCAAAAAGCAACCGCAGAAGCGATCGTCCAACGGAAAGTTCGCGTCCGCCAAAACCCCCACACCCCCTAAAGAGTACCCAAAAACATTCCCGACCCCCAAAAAACAACCAATCACCATTCCCAACTACCAAATTAATAAAGAAGAATCCCCTAGCAGCTCCACACAAAAAGATAACCCTAACAGCACAAGCAGTAGTAATTTACTCCAAAATGTCTTCAAAAACCAAAATCTAGCACAAATGATGGAAATGCAGAAAGTTCCCATAACCCCCATGATGGACCCCCTATACATGCAGCATATATACAACAGCCTGGGTCAAATGGACCCGCGGCAGTTGGCTCTGTACAGGGACTTTATGACCAATCAGTTTAGGGGTTACACGGGGTTACTAAATATGGCCACGCCTACAACGAAAAATTAG
- Protein Sequence
- MYMLVVKLASESVIRISVPYLSFIFDSNMMITMIVMDEVLAINDKVVLRAEDLLSWVCCGAGWRWGLRAVWRGACAPPAEAAPPTQPLHHTRLDFSDIDKEKSAISVDEESPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAPRSRSRSRSPDSRSSDSDRNTPDTKTPRRLSLRNGPEKQSEEEDEVEKKPEEAAKDEAFLQQLRNFATRKGETLKITHSVKHVSLRSLYVAVVSVGGYEAACRSQFWRRGYNEKASKVRRLYERYLLQFENHERWNGRKFPRLPNGRLIPEPKTIDTIEVTDSPVRDIDNKPHLPEKRLRTPSPKKPENPEKTETTPEKHEKLVLDNETGELMKEELNITSKPAEELNREFLESLPPKDEEKSDRTEKTEKTEKSEKPVKIFVKPVEKLIEPSLKENVVKIFEEDTASAKHTLTDSSKSVDDKNDGGRFLNELAQKLHLGNSDTRFLQHLSQSQSASADSLSSLSSLGDKYTNGHANVEQKSRPAPTGRSSLRAVRVKPARGSSARHTPPVPPPLSDSASSSPPLTSVVTTPTPTPTPAPTATPSYTVTNFGIHHPRPTSHSDDEIVEVPYQPKSPEIIDLDEYPESPQGIKKKKLDILKERGLEVTAVPPGPVWPLANPITPLISPNPIILNPVQHQILTQAQMFQMYSIIPNYPNGAPAPKVIQASSAFGNAGPEKTVYGNPKDPFMPPPHVIQGTPIKPQRSITTIGNTPTPPDLLDLTCKTQKPAVEIVKIPSDSTPSPSKTNPQNLSKNYTLLDGKAVVSNLEITLVNPKPQTPPKKQPQKRSSNGKFASAKTPTPPKEYPKTFPTPKKQPITIPNYQINKEESPSSSTQKDNPNSTSSSNLLQNVFKNQNLAQMMEMQKVPITPMMDPLYMQHIYNSLGQMDPRQLALYRDFMTNQFRGYTGLLNMATPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00953305;
- 90% Identity
- -
- 80% Identity
- -