Basic Information

Gene Symbol
arid5b_1
Assembly
GCA_947086495.1
Location
CAMTZB010000008.1:8253222-8266337[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.5e-08 0.0002 22.6 0.0 3 88 227 301 225 302 0.80

Sequence Information

Coding Sequence
ATGGTTAAAAGTCGGCATTCTGATGAAGTCTTAGCTATCAACGATAAGGTTGTGCTTCGCGCTGAAGACCTTTTAAGCTGGGTTTGTTCGGGTTCTGGTTGGAGATGGGGTCTACGGGCAGTCTGGCGAGGCGCCTGTGCCCCTCCTTCCGACACTCAACTAACAGCACCTCTACATCACACCAAGCTGGACTTCAGCGACGTGGAAAAAGAAAAGAGCGCTATATCGGTGGATGTCGAAGACCCTGGGGTGGTGGTATTCTCCTACCCACGGTACTGCCGGTACCGTGCACTGTTGGCGAGACTTGAAGGTATCCAGGCAGACTGGCTGAGGGATTCTCTCGTGGCGGCCTTGGGAGGCTACGCAGCACCAACGAAAAACACTAGAATATTATATTGCaagGATACCTTCGAATACCCTGAGTTAGAGGGCCACGAGTTCGTGTGCAACCACCTCGCGCCCAAACTGAAAGGGAGGCCTCGAGGTCGAAGAAGGAGGGCGGCAAGATCCAGGTCCAGGTCTCCGGATCGGTCGCCAGACTCCCGCTCGAGCGATAGCGACGCCAGGAACACGCCGGACACTAGGGCTCCAAGGCGACTGTCCCTTCGTAGCGGGCCCGAAAAGCAAAGCGAAGAAGAGGAGGAAATAGAGAAGAAAGCAGAAGAGTTAGCGAAAGACGAAGCGTTCCTGCGTCAACTGAAGGACTTCTTCAAGGGTCTGCCGTCCTGCGAGTCGCTCAAGATATCCCATAGTGTCAAAAACGTGTCATTGAGGTGTTTGTACGTGTCGGTGATATCTTCGGGGGGCTATGAAGCGGCGTGTCGTAGTGAATTTTGGCGGCGTAATTACGCAGAAAAGGCGGCCCGAATGCGCCGGTTGTATGAGAGATACCTCCTTCAACTCGAAAACCACCAAAGATGGGACAGGAGATGCTGCCCGAAGCTTCCGAACGGAAAGTTCTCAGAACCAAAGACAATAGACACAATTGAGGTCACAGATTCTCCCGTCCGAGACATAGACTTTAAGCCCAATCTCCCAGAAAAAAGGCTTCGGACGCCGTCTCCCAGAAAGCACGAGAAGCTAATCCTGGACAACGAAACCGGGGAACTGCTTAAAGAGGAGATGGACATCACGTCGAAACCAGCTGAGGAGTTAAATAGAGAATTCCTTGAATCCCTACCTCCGAAAGAGGAAGATAAGCCAGTAAAGATCTTCGTGAAGCCCGTGGAAAAGCTGATCGGGCCCAGTATGGATGAGAATATGGTGAAGATATTCGAGGAGAAAACCGCTCTCATATCCGAGTTGAATAAGAAGAAAATTATGGAATCTAGCAAAAATATAGATAGTAGTCAATTAAGCGATGGAAATACGCGTTTCTTGAACGAATTGGCACAGAAATTGCATTTAGGTAACGCCGACACCAGGTTCCTGCAGCAGTTATCCCAGAGCCCGTCCACTGACAGCCTCACGAGTCTGTCTTCGCTGGGGGACAAGTACACTAATGGCCACGCTAATGGCACCAATTTAGGCGAACAGCAAAAGCGCCCGGTCGGACGCAGCTCGTTACGCGCAGTGCGTGTGAAGCCCACCAGGCCAATGACCGCGAGGAACACTCCGCCAGTTCCACCACCCCGCTCGGACTCGGCGTCTTCTTCACCACCAATGAGCGCCGCTACCACCACCACCGCCCCTACCATCACCAACTTCGGCATCCACCATCCTCCACCACCAGCTACGCATAGCGACGATGAAATCGTTGAgGTACCATATCAACCTAAAAGTCCAGAGATCATAGATCTCGATGAGTATCCGGAGAGTCCTCAGGCAATCAAGAAAAAGAAACTGGATATCCTCAAAGAGAGGGGTTTGGAAGTCACAGCCGTTCCTCCTAGCCCAATGTGGCCACCACCACTGCCCAATCCCTTAGCGCCCCTCATCAACCCAAGCCCTATAATACTGAATCCGGCCGTCCAACATCAGATACTAACCCAAGCTCAAATGTTccaaatgtataatattattccAAATTATCCAAACGGTGTTCAAGCTCCGAGGGTCATTCAAGCCTCAAGTGCTTTTGGAACATGCGGCCCAGAGAAGACTGTGTACGGAAACCCAAAAGACCCCTTCATGCCACCACCCCATGTACTTCAAGGGACCCCTATAAAACCCCAAAGAAGCATCGCCACACCTACAACGACACCTCAAGACATTCTTGATCTGACGTGCAAAACACAAACAGGCGCAACCCAAAAACCAGCGGTCGAAATCGTGCGAATACCATCCGCGCCGTCTCCTTCCAAGACGCCCAATAATCCGCAAAATCTAAGTAAAAACTACACCATACTAGATGGCAAAGCCGTAGTATCAAATCTAGAAATAACCTTAGTCAATCCCAAATCCCAAACGCCACCGAAGAAACATCCCCAGAAACGTTCTTCGAACGGGAAATTTGCGGCCGTAAAAACCCCTACACCCCCCAAAGACTACCCCAAACCATATCCGCCCCCTTCCCCGTCGAATATAAAGAAACCCCCGATAGTTGTTCCGAATTACCAAATAAACTCTAAAGACGATTCACCAACTAGTTCAACGGCGCCAAAAGATCCACTTATTCAAAATACCTTGCTCCAGAGCGTGTTCAAGAATCAAAATTTAGCACAAATGATGGAAATGCAGAAGATCCCTATGAGCCCGCTGATGGATCCTCTCTACATGCAACACATTTACAACAGTCTGGGCCAAATGGACCAACGACAATTGGCTATGTATAGGGACTTTATGACAAACCAATTTAGGGGTTATAGTGGGCTGTTGAATATGGCCACGCCTACAACGAAGCATTAG
Protein Sequence
MVKSRHSDEVLAINDKVVLRAEDLLSWVCSGSGWRWGLRAVWRGACAPPSDTQLTAPLHHTKLDFSDVEKEKSAISVDVEDPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAARSRSRSPDRSPDSRSSDSDARNTPDTRAPRRLSLRSGPEKQSEEEEEIEKKAEELAKDEAFLRQLKDFFKGLPSCESLKISHSVKNVSLRCLYVSVISSGGYEAACRSEFWRRNYAEKAARMRRLYERYLLQLENHQRWDRRCCPKLPNGKFSEPKTIDTIEVTDSPVRDIDFKPNLPEKRLRTPSPRKHEKLILDNETGELLKEEMDITSKPAEELNREFLESLPPKEEDKPVKIFVKPVEKLIGPSMDENMVKIFEEKTALISELNKKKIMESSKNIDSSQLSDGNTRFLNELAQKLHLGNADTRFLQQLSQSPSTDSLTSLSSLGDKYTNGHANGTNLGEQQKRPVGRSSLRAVRVKPTRPMTARNTPPVPPPRSDSASSSPPMSAATTTTAPTITNFGIHHPPPPATHSDDEIVEVPYQPKSPEIIDLDEYPESPQAIKKKKLDILKERGLEVTAVPPSPMWPPPLPNPLAPLINPSPIILNPAVQHQILTQAQMFQMYNIIPNYPNGVQAPRVIQASSAFGTCGPEKTVYGNPKDPFMPPPHVLQGTPIKPQRSIATPTTTPQDILDLTCKTQTGATQKPAVEIVRIPSAPSPSKTPNNPQNLSKNYTILDGKAVVSNLEITLVNPKSQTPPKKHPQKRSSNGKFAAVKTPTPPKDYPKPYPPPSPSNIKKPPIVVPNYQINSKDDSPTSSTAPKDPLIQNTLLQSVFKNQNLAQMMEMQKIPMSPLMDPLYMQHIYNSLGQMDQRQLAMYRDFMTNQFRGYSGLLNMATPTTKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00953305;
90% Identity
iTF_01018364;
80% Identity
-