Basic Information

Gene Symbol
arid5b
Assembly
GCA_905333055.1
Location
HG995233.1:7119405-7131215[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-09 2.9e-06 27.9 0.4 3 89 339 412 337 412 0.88

Sequence Information

Coding Sequence
ATGGAAACGACATCGCTTGGTCACAGAATAGCGCCGCGAGGTGGTTACTTATTTGAAAGCAATTTTAGTTCGCCCCTTCGTTTAGAGTGGGACAGGGACGGACTTGGAAGATTTATTAGTATTTTTATTCAAACTCAAAATCATTTATTCACAAGTGACGAAGTCCTAGCCATCAACGACAAAGTGGTACTCCGAGCGGAGGACCTGCTGAGCTGGGTATGTTCGGGCGCCGGCTGGCGCTGGGGCCTGCGCGCCGTGTGGCGGGGGGCCTGCGCGCCGCCAGCGGAGCCCCAGCCCACCGCGCCGCTGCACCACACCAGGCTCGACTTCAGCGATGTCGACCGCGAGAAGAGCGCCATCTCGGTGGACGTGGAAGCGCCAGGAGTGGTGGTGTTCTCGTACCCTCGCTACTGCCGCTACCGGGCCCTGCTGGCGCGGCTGGAGGGCATACAGGCGGACTGGCTTCGGGACTCGCTGGTGGCCGCGCTGGGAGGCTACGCCGCGCCCACTAAGAACACTAGGATATTGTACTGTAAGGTATGTCCTGGTTCCTCCTTCACCTTCCCAGCTGTGGACGTGGAAGCGCCAGGAGTGGTGGTGTTCTCGTACCCTCGCTACTGCCGCTACCGGGCCCTGCTGGCGCGGCTGGAGGGCATACAGGCGGACTGGCTTCGGGACTCGCTGGTGGCCGCGCTGGGAGGCTACGCCGCGCCCACTAAGAACACTAGGATATTGTACTGTAAGGACACATTCGAGTACCCGGAGTTAGAAGGGCACGAGTTTGTGTGTAACCACCTAGCTCCTAAACTGAAGGGCAGACCGCGCGGTCGGCGGAGGCGCGCGCCGCGCTCGCGGTCTCGCTCGCGCTCGCCGGACTCGCGGTCAAGCGACAGCGAGGCGAGAAATACTCCTGAGACTAAGACTCCAAGAAGGCTCTCCCTCCGAAATGGACCAGAGAAGCAGAGCGAAGAAGAGGAAGAAGTGGAGAAGAAGCCGGAGGAAGTAGCGAAGGACAAAGCTTTCGAGCAGCAGCTGAAAGACTTCTTCACAAGGAAGGGTCAAACACTGAAGATATCGCATAGCGTCAAAAACGTGTCGTTGCGAAGTCTATACGTGGCGGCGGTGTCGGTGGGAGGCTATGAGGCGGCGTGCCGCGGGCAGTTCTGGAGACGAAACTATAACGAGAAGGCTTCCAAAGTGCGGCGGTTGTATGAGAGATACCTCCTACAGTTCGAACACCACGAAAGGTGGAACGGCAGAAAATTCCCCAAACTGCCCAACGGAAAGCTAACCGAACCAAAGACCATAGACACGATAGACGTCACAGACTCGCCAATACGAGACATAGACAAACCAAAAGAACTGCCAGAGAAAAGGCTGAGAACACCTTCACCGAAGAAGCAAGAAAAACTAATCCTAGACAACGAAACTGGAGAACTATTGAAGGAAGAACTGAATATCACGTCAAAACCTGCTGAAGAACTAAACAGAGAATTCCTAGATTCTCTACCACCCAAAGTAGAAGAGAAGGCTGTGAAGATTTTCGTGAAACCCGTAGAAAAACTAATTGAGCCGAGTTTGAAGGAAAATGTCGTAAAAATATTCGAAGAGAACACAGCCTTAATGTCTGAACTGACTAAGCAGAAATTGATGGATTCTAGCAAGAGTGTAGAGGCGAAGCATATGAGTGAAGGGAATAGCAGGTTCTTGAATGAGCTGGCCCAAAAATTGCATTTAGGTAATTCAGACACCAGATTTCTGCAGCATCTCTCTCACAGTCAGTCGACTGACAGTCTGTCGAGTTTATCTTCTTTGGGAGATAAATACACTAACGGACACACAAATGGCACCAATAACGCTGAACAGAAGTCTCGTCCGGCGGGGCGGAGCTCCCTGCGTGCCGTCCGAGTGAAGCCCACGCGACCGATGACTGCCAGACAAACCCCGCCGGTCCCCCCTCCCCGCTCGGACTCGGCGTCGTCCTCCCCCACGCTGTCGGCCGCCACCACCCCCGTGTCCACGCCCAGCGCTGGGCCCACCACCACCATCACCAACTTCGGCATCCACCACCCGCCGCCGCCCGCCACCAGCGACGACGACATCGTCGAGGTACCTTACCAACCAAAGAGCCCAGAAATCATAGACCTGGACGAATACCCCGAGAGCCCACAAGGAATCAAGAAGAAAAAGCTGGAAATCCTCAAGGAAAGGGGCCTCGAAGTGACAGCGGTCCCCCCAGGCCCCGTGTGGCCCCAACTCGCCAACCCCATCACCCCACTCATCAACCCTAGCCCCATAATCCTCAACCCAGCAGTACAACATCAGATCTTAAGCCAAGCACAAATGTTCCAAATGTACAACATCATTCCAAATTACCCAAACGGGGTCCAAGCACCCAAAGTCATTCAAGCTTCAAGCGCTTTCGGGAACGCGGGACCCGAAAAAACCGTTTACGGCAACCCCAAAGACCCATTTATGCCCCCACCGCACCTCCTCCAAGGCACCCCAATAAAACCCCAAAGGAGTATAACCACCCCTGTTCCAACCCCTCAAGATATTTTAGACTTGACATGCAAAACCCAAGCAACCCAAAAACCAGCCGTCGAAATCGTCAGAATCCCATCCGATTCCACCCCATCCCCTTCAAAAACACAAAACCCCCAAAACTTAAGCAAAAACTACACAATCCTCGACGGCAAAGCTGTGGTATCAAATCTAGAAATCACATTGGTCAACCCGAAATCCCAAACGCCACCAAAAAAACCCCCCCAAAAACGGTCTTCAAACGGCAAATTTGCGTCCCTCAAAACGCCTACCCCTCCCAAAGATTACCCTAAAACATTCCCAACCCCGTCCCCTAAAAAACCCCCAATAGTCGTACCTAGTTATCAAATTGCTAAAGAAGAATCCCCGAGTAGTTCAACGCAAACTCAGAACAAAGATTTGAGTTTACAGAACAGTTTGCTCCAAAATGTTTTCAAAAACCAAAATTTAGCGCAAATGATGGAACTGCAGAAGGTCCCTATGGCGCCTTTAATGGACCCTTTATATATGCAGCATATATACAGCAGTCTTGGCCAAATGGACCAAAGACAGTTGGCCATGTATAGGGACTTTATGACCAATCAGTTTAGGGGTTACACGGGGCTACTAAATATGGCGACGCCTACAACGAAGAATTAG
Protein Sequence
METTSLGHRIAPRGGYLFESNFSSPLRLEWDRDGLGRFISIFIQTQNHLFTSDEVLAINDKVVLRAEDLLSWVCSGAGWRWGLRAVWRGACAPPAEPQPTAPLHHTRLDFSDVDREKSAISVDVEAPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKVCPGSSFTFPAVDVEAPGVVVFSYPRYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRAPRSRSRSRSPDSRSSDSEARNTPETKTPRRLSLRNGPEKQSEEEEEVEKKPEEVAKDKAFEQQLKDFFTRKGQTLKISHSVKNVSLRSLYVAAVSVGGYEAACRGQFWRRNYNEKASKVRRLYERYLLQFEHHERWNGRKFPKLPNGKLTEPKTIDTIDVTDSPIRDIDKPKELPEKRLRTPSPKKQEKLILDNETGELLKEELNITSKPAEELNREFLDSLPPKVEEKAVKIFVKPVEKLIEPSLKENVVKIFEENTALMSELTKQKLMDSSKSVEAKHMSEGNSRFLNELAQKLHLGNSDTRFLQHLSHSQSTDSLSSLSSLGDKYTNGHTNGTNNAEQKSRPAGRSSLRAVRVKPTRPMTARQTPPVPPPRSDSASSSPTLSAATTPVSTPSAGPTTTITNFGIHHPPPPATSDDDIVEVPYQPKSPEIIDLDEYPESPQGIKKKKLEILKERGLEVTAVPPGPVWPQLANPITPLINPSPIILNPAVQHQILSQAQMFQMYNIIPNYPNGVQAPKVIQASSAFGNAGPEKTVYGNPKDPFMPPPHLLQGTPIKPQRSITTPVPTPQDILDLTCKTQATQKPAVEIVRIPSDSTPSPSKTQNPQNLSKNYTILDGKAVVSNLEITLVNPKSQTPPKKPPQKRSSNGKFASLKTPTPPKDYPKTFPTPSPKKPPIVVPSYQIAKEESPSSSTQTQNKDLSLQNSLLQNVFKNQNLAQMMELQKVPMAPLMDPLYMQHIYSSLGQMDQRQLAMYRDFMTNQFRGYTGLLNMATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00953305;
90% Identity
iTF_00953305;
80% Identity
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