Mgen005718.1
Basic Information
- Insect
- Malaya genurostris
- Gene Symbol
- Lrrfip2_1
- Assembly
- GCA_030247185.2
- Location
- CM058071.2:117031237-117042412[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.44 1.9e+04 -4.2 0.7 47 75 80 107 62 121 0.41 2 2 5.4e-110 2.3e-105 353.4 37.7 1 299 191 482 191 483 0.90
Sequence Information
- Coding Sequence
- ATGAGTAGTGACATAAAGTTAAGCATCAGTGAGGACGAGTACCGAGCGCGCGGTACCGGCCAGCAGCAGTTCGTCTATCATTCCGACGaggatgatgacgacgacgacgaacaGGGTGAATTCTATAGTTTCGAAACACCGACCGAACTGGATCCGCTAGCGCTGGATCTTACGGCGGAACTGAAAATTCGTGAATCCAACGAAGAACTGAATGTGGATATTAACCGGAATGATCTGAGCGTCAAGAGCGATCGGTTGCACGAAACGAGTAGTGATAATATGTTAGTGAATACTAGTAGTACCGGATTAAGTAGTGATAgtgtttttgatgaaaatgatTCACCTGTCAACGATCAGCGGCGATTCAGTGCGGTGATGACTGGTGGCGGGGAGGACGAGGTGGACCGTAGCTACGATAGCTACGCGGATAGTCAGAAATCCGACCCGGACCATAGCCTGTACGAACCCCACCGACAGTACCATCGGCTTTCGGTGTGTCACACCGGAGACGAGTTCAGTTCCGACGAGGATGAAGCCTTTGTGGAACTACTTGAGAAGGCAAATCACATAGCGGAAGCACGACTGGCAGCGCGACGGCAGGCACGTGCGGAAGCTCGTGAAATCCGTATGCGAGAGTTGGAGCGACAGCAGAAAGAACTGGAACAGAATGCCGACCGCGTGTTCGATCTTCAGCAGCAATCCGTTGGTCTGTCGGCTACGGATAGCTCGCTGGGACCACGGGCGACACGACTGACCGTCAACAGCAGCGCGGTACGGGGCAGTTCGCTTTCGTCCCGGAGAAGCAGTGAAGATTCCCTGGAGGAAGAAGGACGAAGTTTACGGGACCTACGGCATGAGCTGAAGGATGTGGAAGAACGTTTCCGCAAGGCGATGGTCGCCAACGCCCAGCTAGATAACGAACGTGCCTCCCAAAGCTACCAAATTCAGCTGCTGAAAGACAAGCTCGAAGAGATGGAAGAATCGCACGCCCAGCTGCAGCGAGAACACAAGGAGAAATGCCGTGATCACGATGCCTTGAAACGAGCCAACGACAAGCTGTCCGAAGAGTTGAAACTGGTGCAGGGTCAGCTCCAGGAACGGGACACACTGATCGAGGAACAGGGCCTAGTGATCGTGACCGTGGAAAACGAGGACGGCTCCGATGCGCGACGCGCACTAGTCACAGTAGAGAACGCACAATTGTTAGGATCCGTACAGGGTTCGTTAGATGTAAGGTTGAAGAGGTTCGCAGAGGAGAAACTAGAACTACAAAACGAAGTTCAGATGCTACAGCAACAATTAAAAGACTTTAAGACCAAGGGCCGGAAGTACAGTGCCCTCAACGGGGCATTGGACGATGACGATTACGAAGATGCACAAAGAGAAGCCAACAAACTAATCACCGATTACAAATACAAACTGCAGAAAGCAGAGCAGGAAATTGCCAACCTGCAGGCCAGTCTGGCTCGTTCCGAAACGCAGGTGATTCGATACAAGAGTACCGCCGAAGCGGCAGAAAAGGCTGAAAGTGATCTTAAAATCGAAAGGAGAAAGCTCCAACGAGAGCCAATTATCACCCAGTTCTGGGACGAATGCCACTGCCAGTAG
- Protein Sequence
- MSSDIKLSISEDEYRARGTGQQQFVYHSDEDDDDDDEQGEFYSFETPTELDPLALDLTAELKIRESNEELNVDINRNDLSVKSDRLHETSSDNMLVNTSSTGLSSDSVFDENDSPVNDQRRFSAVMTGGGEDEVDRSYDSYADSQKSDPDHSLYEPHRQYHRLSVCHTGDEFSSDEDEAFVELLEKANHIAEARLAARRQARAEAREIRMRELERQQKELEQNADRVFDLQQQSVGLSATDSSLGPRATRLTVNSSAVRGSSLSSRRSSEDSLEEEGRSLRDLRHELKDVEERFRKAMVANAQLDNERASQSYQIQLLKDKLEEMEESHAQLQREHKEKCRDHDALKRANDKLSEELKLVQGQLQERDTLIEEQGLVIVTVENEDGSDARRALVTVENAQLLGSVQGSLDVRLKRFAEEKLELQNEVQMLQQQLKDFKTKGRKYSALNGALDDDDYEDAQREANKLITDYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQREPIITQFWDECHCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01461902; iTF_01524816;
- 90% Identity
- iTF_01461902;
- 80% Identity
- -