Mgen020164.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Malaya genurostris
Gene Symbol
sip1
Assembly
GCA_030247185.2
Location
CM058072.1:229886889-229889388[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-95 3.5e-91 306.8 9.8 1 275 388 654 388 654 0.98

Sequence Information

Coding Sequence
ATGGCTGACGAAGAGTACGAACGTTTCGAAATAACCGACTATGATTTGGATAATGAGTTTAATCCGAACCGTCGCAGCCGGCGTCCTACCAAACATCAACAAATTTATGGCATTTGGGCGGACGAGGATTCAGATAATGAATTGGCGGATGAAGAAGCAGGTTCTTCTCGTAGAGGACGTATTCGGGCGGGTAAAAAATCGAAGGATTACTCCGCTCCTATTGGATTCGTAGCTGGCGGAATTCAGCAAGCTGgtaaaaagaaagaagaaaaaaaagacgATGATGCTGAGGAAGAAGATGAAAAAAGACCTCGCTTTGGAACGGTTAATAGCGGAACTAGCTCCGAATCAGAATCGGAAGCAACTCCAAAGGCGAATGATTTCAGGTCAATGGCTGGCTTTCGTAAATTTACTGCCCAAAGCACCTCCAATGTTGGCAGAGGCGTTGGAAACTGGGAACAACACACTAAAGGTATTGGGGCGAAACTGCTCCTACAGATGGGTTATCAACCAGGAAAGGGTCTGGGAAAGGATCTTCAAGGTATTTCTGCTCCGATTGAGGCTCATCTAAGAAAGGGACGCGGAGCAATTGGTGCGTATGGGCCCGAGAAAAAAACGGTTGTAAAAGATCAGAAGCACAAAGCAGTCAAAGATGAATCGAGCGAAATTAAAGAAAAAGATATCAGTCAGCAATggaaaaaggaaaaacacaAGGGTCGTTATTTCTACAAGAGCGTTGAAGACGTAATTGAAAAGGGTAAACGTTCTTTTGCGCTTTTTGACAAGAATTCCAAGCTAAGTCATGTCAAGGTAATTGATATGACGGGCCCCGAAAGCAGAGTGCTAAGTGGATACCATGCTCTGGGTCAAGCTAAAATGGTTGATGAAGATCTGTATGATGCTAAACCTACTAAAGAAACGGCAAATTTTGCGCTTCCAGAACTGATgcacaatttaaatttaattgtgGAACTTTGCGAGCAGGATATTATTGCCAttgacaaacaaaaatgttcGTCTAAAGATCGAGAGGAGCAACTGGAAATTGAGAAAGATAATCTCATTCGCATTACTCAATTAGAAGAGGATTATATTCAAACACTGGAAGGTGCTTTAGAATTGGTTAAAGCTTTGGTAGAACCAGAAAGTGGATCAGTTTCTTTAGAAGACTGCGAACGAGTTTTTGTTCGAATGCAAACGGAATTTCCAGCTGAATATAAAGAATTCGGTCTGGCAGACTTGGCCCCTGGCGTTGTTGCTCCGTTGATAGCCGCTCGCTTGAAGGAATGGAATCCGTTTGTTGAGCCAACACTTCATCTAGACCTGTTCAAACGATGGCGTTCAATTTTGGGTTCATCGGACACGGAAAGACGCAATCTATTGGATCCGTATTCTGGTCTTGTGTGGTCCGGAGTAATTCCAAGTATCCGATCAGCCGCCACGAACTGGGACCCACGAATACACCAACCAATGATAGCACTACTCGATGCGTGGGCTCCTCTACTGCCGGCATGGATTTTGGACAACGTTCTAGAGCAGATTACGATGAATAAATTGACTTCTGCAGTAACAGAATGGGATCCACTGACGGACACGATACCAATTCACATTTGGATTCAACCGTGGGCCGGCATTCTCGgatcaaaaatggaagaaagTATTTATCCAACCATTCGAGAGAAACTCAGCAAGGCATTGAAAGCATGGAATCCCGAAGATCGATCAGCCCGGGCCATGATCACTCCGTGGAAGGGAGTCATGGCCGAAGAAGATCTTCAAGCGTTCCTAACAAAGAACATTATTCCGAAGTTAGAGCTACGATTAACAGAACTGGTGATCAATCCACTGCAGCAAGATTTAGaaattttcaatcaaGTGTGGGAATGGAACGAACTCATCTCAACTCTTCAGATGGCATCCATCCTGGATAAATATTTCTTCCCGAAATGGATACAAACACTGGTGCTATGGTTAAACCAGTCTCCCAATTTCGATCAAGTAACGCGTTGGTATCAGGGCTGGAAATCGCAGTTCACCGATGACATAATCCGCCAGACaaacatcaaggaaaacttcCGCAAAGCGCTGGAATTGATGCAGCGTTCAATTGGAATAACGACATCATCGTCGGcaccttcttcttcttccgaacCAATGGACACGACGCCAGTTGCCTCCACTACGAAGTCATCTACTATCGATATTTCCGGAGATGCTGTACCTTCGATGGAATTCAAGGAACTCGTTTCCCAAAAGTGCGCCGAAAGAGGCATCATATTTGCGCCGATGCCGGGTCGAAGAGAGATGGGCAAACAGGTTTATCGAGCGGGAAAGCTATTTTGCTACATCGATCGATCGGTTTGTGTGGTTAGCCTGGATGGCGGTGTCAACTGGACTCCGATTTCTTTGTCGGCTATGCTGGATCGAGCGATTAGTGGTTAA
Protein Sequence
MADEEYERFEITDYDLDNEFNPNRRSRRPTKHQQIYGIWADEDSDNELADEEAGSSRRGRIRAGKKSKDYSAPIGFVAGGIQQAGKKKEEKKDDDAEEEDEKRPRFGTVNSGTSSESESEATPKANDFRSMAGFRKFTAQSTSNVGRGVGNWEQHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPIEAHLRKGRGAIGAYGPEKKTVVKDQKHKAVKDESSEIKEKDISQQWKKEKHKGRYFYKSVEDVIEKGKRSFALFDKNSKLSHVKVIDMTGPESRVLSGYHALGQAKMVDEDLYDAKPTKETANFALPELMHNLNLIVELCEQDIIAIDKQKCSSKDREEQLEIEKDNLIRITQLEEDYIQTLEGALELVKALVEPESGSVSLEDCERVFVRMQTEFPAEYKEFGLADLAPGVVAPLIAARLKEWNPFVEPTLHLDLFKRWRSILGSSDTERRNLLDPYSGLVWSGVIPSIRSAATNWDPRIHQPMIALLDAWAPLLPAWILDNVLEQITMNKLTSAVTEWDPLTDTIPIHIWIQPWAGILGSKMEESIYPTIREKLSKALKAWNPEDRSARAMITPWKGVMAEEDLQAFLTKNIIPKLELRLTELVINPLQQDLEIFNQVWEWNELISTLQMASILDKYFFPKWIQTLVLWLNQSPNFDQVTRWYQGWKSQFTDDIIRQTNIKENFRKALELMQRSIGITTSSSAPSSSSEPMDTTPVASTTKSSTIDISGDAVPSMEFKELVSQKCAERGIIFAPMPGRREMGKQVYRAGKLFCYIDRSVCVVSLDGGVNWTPISLSAMLDRAISG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01461900; iTF_01524814; iTF_01471425; iTF_00400564; iTF_00401703;
90% Identity
iTF_01461900;
80% Identity
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