Cqui006878.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Culex quinquefasciatus
Gene Symbol
sip1
Assembly
GCA_015732765.1
Location
NC:129046144-129050641[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-96 3.6e-92 308.6 11.2 1 275 392 659 392 659 0.99
2 2 0.36 5.3e+03 -3.6 0.0 162 189 672 702 665 707 0.54

Sequence Information

Coding Sequence
ATGGCCGCCGAGGAGTACGAGCGATTCGAGATAACGGACCACGATCTGGAGAGCGAGTTCAACCCGAACCGGCGCAGTCGGCGACCTACGAAGAATCAGCAAATTTACGGCATCTGGGCGGACGACGATTCCGAGAATGAGCTGGAGGAAGGTTCCAGGCGGGGTGGTGGCCGCGGCGGTGGTAAGAAGACGAAGGACTACTCGGCGCCGATTGGCTTTGTGGCCGGCGGGATTCAGCAAGCTGGGAAGAAGAAGGAGGAAAAGAAGGAGAAGAGTGAGGACGAGGAGGAGGACGATGAGCGGCCACGGTTTGGGGCGGCGGCGAGGAAGGTCAGCGGGACCAGTTCCGAGTCGGAACAGGAGGAGGTTCGGGATATTCGGTCGATGGCTGGGTTTAGAAAGGCCGGAGGAGGATTCCAGCAGAAGGGAGGACCGTCTGGGCGGGGAGTTGGCGGTTGGGAGCAACACACGAAGGGAATCGGCGCCAAGCTGCTGCTTCAGATGGGTTACCAGCCGGGAAAGGGGTTGGGAAAGGACCTGCAAGGTATTTCGGCCCCGATTGAGGCTCATCTGAGGAAGGGACGAGGAGCGATTGGCGCTTACGGACCGGAGAAGAAGACCGTGGTAATGGACCAGAAGGCGCCGAAGGAAACGGGGGGAAGCAAGAAGGAGGAACTTAAGGAGCTGACTGAGAGTGGCCAGCAGTGGCGCAAGGACAAGCACAAGGGACGGTACTTTTACAAGAGCGTCGAAGATGTCATCGAGAAGGGCAAGCGATCTTACAACTTGTTCGATAAAAACTCCAAAATGAGTCAAGTTAAGGTGATCGACATGACCGGGCCAGAGAGTCGTGTCCTGAGCGGATATCATGCTCTGGGACAGGCCAAGGTCGCAGACGAAGATCTGTACGATGGGAAGCCAACGAAGGAAACGAGCAATTTTGCACTGCCCGAGTTGATGCACAATTTAAACTTGATTGTGGACTATTGCGAGCAGGACATCATTGCGATCGACAAGCAGAAAACGACGGCGAAAGATCGCGAGGAGCAGCTGGAGATCGAGAAGGAGAACTTGATCAAAATTACGCAGCTTGAGGAGGATTACATTGCGACGTTGGAAGGTGCCCTCGAGCTCGTCCAAGCCCTCGTCGAACCCGAGGACGGGTTCGTCTCGCTGGAGGAGTGCGAACGGATCTTCGTCCGCATCCAGTCCGAGTTCGCCGCCGAGTACAAAGAGTTTGGCCTTGCCGATCTCGCCCCGGGTGTCGTTGCCCCGATGATCGCGGCCCGGCTCAAAGAGTGGAATCCCTTCGTCGATCCGACGCGCCATCTGGAGTTGTTTAAGCGCTGGCGCACGATCCTGGGCTCGTCGTCCGACTCGGAAAAGCGTAATTTGCTTGATCCTTACTCGGCCCTGGTTTGGTCCGGGGTCATTCCGAGTGTGCGGACTGTGGCGACCACGTGGGATCCGCGCATTCATCAGCCAATGATTGCGCTGTTGGACGCGTGGGCGCCACTCTTGCCGGCTTGGATCTTGGATAACGTCCTGGAGCAGATCATCATGAGCAAGCTGACGGCGGCCGTAACCGAGTGGGATCCGCTGACCGATCACATCCCGATTCATATCTGGATTCAGCCGTGGGCGGGAATTTTGGGCTCGAAAATGGAGGAGACCATTTATCCGACGATTCGGGAGAAGTTGAGTAAGGCGCTGAAGGCATGGAATCCAGAGGATCGGTCGGCACGGGCTATGATTACGCCATGGAAGGGCGTAATGGCGGAGGAGGATCTGCAGGTATTCCTTACGAAGAACATTATTCCTAAGCTGGAGCTAAGGCTGACGGAGCTGGTGATCAATCCGCTGCAGCAGGACTTGGAAATCTTCAACCAGGTCTGGGAGTGGCACGAGCTCATCTCCACCATCCAGATGGCCTCCATCCTGGACAAGTACTTCTTCCCCAAGTGGATACAAACGCTGGTTCTGTGGCTAAACCAGTCGCCCAACTTTGACCAGGTCACGCGTTGGTACCAGGGCTGGAAGTCCCAGCTGACCGACGACATTGTCCGCCAGACAAACATCAAGGAAAACTTCCGCAAAGCCCTGGATCTGATGCAGCGTTCGATCGGCATCACCACCGGAAGCTCCTCCAGCAGTAGTAGTTCGGCGTTGCCCGAACCGATGGACACGATCCCACCGCCACCGGTGCCACCCTCCATGTCCGCCTCCAAGCCGGTGATGCTGGATTTGGACACGGCACCGTCGCTCGAGTTCAAGGAGCTGGTGTCGCAAAAGTGTGCCGAGCGGGGAATCATTTTTGCACCGATGCCGGGACGGCGCGAGATGGGCAAGCAGGTTTACCGGGTTGGGAAGCTGTTCTGCTACATCGATCGTTCGGTTTGTATTGTGAGCTTCGATGGGGGCGTCACATGGACACCGGTGTCGCTACCGGCACTGATTGAGCGGGCTATCAATGGGTAG
Protein Sequence
MAAEEYERFEITDHDLESEFNPNRRSRRPTKNQQIYGIWADDDSENELEEGSRRGGGRGGGKKTKDYSAPIGFVAGGIQQAGKKKEEKKEKSEDEEEDDERPRFGAAARKVSGTSSESEQEEVRDIRSMAGFRKAGGGFQQKGGPSGRGVGGWEQHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPIEAHLRKGRGAIGAYGPEKKTVVMDQKAPKETGGSKKEELKELTESGQQWRKDKHKGRYFYKSVEDVIEKGKRSYNLFDKNSKMSQVKVIDMTGPESRVLSGYHALGQAKVADEDLYDGKPTKETSNFALPELMHNLNLIVDYCEQDIIAIDKQKTTAKDREEQLEIEKENLIKITQLEEDYIATLEGALELVQALVEPEDGFVSLEECERIFVRIQSEFAAEYKEFGLADLAPGVVAPMIAARLKEWNPFVDPTRHLELFKRWRTILGSSSDSEKRNLLDPYSALVWSGVIPSVRTVATTWDPRIHQPMIALLDAWAPLLPAWILDNVLEQIIMSKLTAAVTEWDPLTDHIPIHIWIQPWAGILGSKMEETIYPTIREKLSKALKAWNPEDRSARAMITPWKGVMAEEDLQVFLTKNIIPKLELRLTELVINPLQQDLEIFNQVWEWHELISTIQMASILDKYFFPKWIQTLVLWLNQSPNFDQVTRWYQGWKSQLTDDIVRQTNIKENFRKALDLMQRSIGITTGSSSSSSSSALPEPMDTIPPPPVPPSMSASKPVMLDLDTAPSLEFKELVSQKCAERGIIFAPMPGRREMGKQVYRVGKLFCYIDRSVCIVSFDGGVTWTPVSLPALIERAING

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00948749;
90% Identity
iTF_00400564;
80% Identity
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