Meup008535.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- bab1_1
- Assembly
- GCA_949089665.1
- Location
- CARXXK010000001.1:105851852-105867827[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-15 2.7e-12 48.1 0.0 1 41 28 69 28 73 0.93 2 2 3.6 1.7e+03 0.7 0.3 6 15 158 167 153 184 0.78
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGCTGGAACACCAACCAGAGCCTCGTGCACAACCTACGGTTCAGAGAGCGCGGTCCGCTCAAGTCGTGGAGACCAGAGACGATGGCCGAGGCCATACTGTCCGTGCTCAAAGAGGGCTTGTCGCTGTCACAGGCCGCTCGGAAGTACGACATACCATATCCAACGTTCGTGCTGTACGCCAATCGGGTACACAACTTGCTCGGTCCCTCCGCAGATGGTGGCGCAGACTTAAGGCCTAAAGGCAGAGGACGTCCTCAAAGAATATTGTTAGGATTTTGGCCAGAAGATCATATTCAAAATGTAATCAGGACTGTTGTGTTTAGAGACGCACAAAACATCAAAGAAGAAGCATTACACCTTTACCCAAGAATACcgtgTTTATCCGACCCAATGTCTGGTGGTCACTATGGTAACAACGCGGTTCAGTCGGTTGAAGGTCCCGTGTCGCCAAACTCTGCCGCGGCCGCCGTGGCCGCCGTCGCGCAGGGTATAAGGCAGCAAATGATGGCCGCCGCCGGACATAACATCTCTCCTTCATCGGGTGTCGACGCGTTCGCCCTACTCGCCTCTTCGCACCTACCCAGTCCGGCTGACATGTCACCAAATTCGTCTCCGCCCGATTCACCGTTAGTTTCCAACAACAACGTCGAGGTGAGCCTAAGTGGTTACAAGCGATCCATCGACCACTCCAACCAAGACAATGTGTTCGTTGAAGACATTGATGAGCTAGTGAAGAACAGCCATTGTACCGGGGGCTCGTCAATGGGCAACACCATCGATCAGCAGCCGTTGCCGTTAGTCATCGAACAACGGACCGAATAA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAILSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNLLGPSADGGADLRPKGRGRPQRILLGFWPEDHIQNVIRTVVFRDAQNIKEEALHLYPRIPCLSDPMSGGHYGNNAVQSVEGPVSPNSAAAAVAAVAQGIRQQMMAAAGHNISPSSGVDAFALLASSHLPSPADMSPNSSPPDSPLVSNNNVEVSLSGYKRSIDHSNQDNVFVEDIDELVKNSHCTGGSSMGNTIDQQPLPLVIEQRTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00308755;
- 90% Identity
- iTF_01330478;
- 80% Identity
- iTF_01037642;