Basic Information

Gene Symbol
Jarid2
Assembly
GCA_949628255.1
Location
OX451207.1:44356349-44363383[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8 3.4e+04 -4.0 0.3 69 82 161 178 139 179 0.56
2 2 7.2e-23 3e-19 70.1 0.0 6 89 1299 1380 1295 1380 0.94

Sequence Information

Coding Sequence
ATGGTACTCAGTAGAAATGACAAAAGGAAGAGAAAGGAAGGTGATCTTGTCGATCTCATGGACCCTCTTTCCGAATCTCCTAAGAGAACCAAGGTCCATGCACAAAGGAAGTTTGCTCAGGGTGTAGCGACCATATTTGGTTCAACGCATCCTGTTAtcaaggaaaaggaaaaggcaAAACCTGCGGTAATAACAGAACTGATAACTCACAGACGTCCTAACACAGAAgattttctcacatttttatgtttcagaGGAACTCCGATCCTCCCTCCAAGCTTGGATTTCTTTAACAATGGAAACAGGAAGGAAAAACAGGGGCAGAAAACGGCTGGTAATATTGTAAAGAATAACTCTTCGTCCTCCGCTATGTCGACTCCTGCTACAGACAATCCAAAACCGACTATAACCAGCCAAAAATTGAGCAGTAAAAATAGCACCAGTACTGTTGATAAGAAGACTACGATACAGAAGAGTATTGCCAAGTATAAGACAGCTACGTCTACAGTTCAAgcattgaaaaagaaatatcagGAACAACGTCTAGCCaaacaaagaataaagaaCAAATTTAAACCCAACTGTGTTATGAGGACACGGTCTTCTACTGATCAAGCTAAAGTAAAAGCTAACAGTGATTTGCCATCTAGAAAGTTTCTGCCTAAAGTTGAGACCAAGAGACATTGTCTCAGGAGTAGCGCCCTTGTAAATAAGAGCAAAAATCTGGGTACAACAAAGGGAAAATTAGATTCACCAAAACCTAAAAAGAGAACATTTGTCAAAGATAAATCTAACGACTCTTCTAACACAGATGTATCTTCTGACGATAATTCACCCATTCTTAAATCTTCTCTACGTAAAAAAGGCCAGACTAAGGTTCTAAAGAAAGTATGCACTAGGAGTAAGTCAGAAATGAGAAGGATAACAAGGTCTCATAGGGAGCCAACTCAACCACAAATTTTATCCAGACGTCCATCTAGAAAGACTAAAGAAGCTGCTGCTGTTTATATGGAAATTCTTGGCAGAAAATTAGTCAGTCCTGATTTGGATAACGAGGATAATTTGTCAGTTGACAGTTTTCCCGAGCTTCCGAATGCCAGAAGATATGCACAGACTGAAAATGAAATCCGAGCAAAAGTTAAACAGTCTTCTAAATTAAATAGCAATAGCAAAGATACAAAATCCGAAAATAACAAGGCGAATAGCACGCGGCTTAGTAAAGATAAAGTCAATAAGAAAGTGGTGAAGAATAAAAGACCTTTgaaagtacaaaaatattgcGAATTAGACAGCGAAGACGATTCAGCCTGTTCTGTACAGTCTGAGAATGTAAAACCCGTGACCAGAAGGAGTCTTGGGAAGTTGCCTGAGCCTACTAGTAGAAGTCTCCGTTCTTCGCCAAGAAACATAGTGACAAAATCACATTCGGAAAAGGTGCCAAAAGATAAGCTtgagaaagataaaatattaGTAAAACGAAAGAGGGAACAAAATATTGGAAAGTTAACACCTGCAAAGAGCAACGTGGTTAAACCAAAGTCAACAAAAAGCAAGATCAAAAGTGATAGCTCTGAATCTGACGAAGAAACTTTGGGTATGCTGCTCGAgaagttgaataaaaagaaagtcAAAACTGAGCCAGTTAAATCggaagaaaaggagaaaataaagagTGAGAATAGCCCACCAGCAAATGGTACTAACGTAAAATATGACACGTCTAAAATATCCGATGACGAAGAGTCTTTTAGAGGATTCTCTAATAAAGCTATAACTAAGGTGCTAAACTCTTGTCATACTCATGTTAAAGCTAATTTACTTGTATCCGAGGAAACGGACGGGAAATTGGATGTGCTCAAAACACAAGACACGCCCCAAACGGATACCTCGGATATAATAAATGACCAATTTACAGTTATGGAGACTAGCGTGATTTTGCCTGTAAATATAAACCCAAATTATACATTAGTCAAGCCCGTTCCAGAAGATCTAGCATTGTCAGATTGTAAGTCAATCTCGCCAGCTCAGCCTCTGGTTACAATAAATccagataaaatttgtaatcatGATCCGAGCGAGTCTACAGTTAATATTATCGACATGCCTCGATCTGCCTCTCTTGGTCGTAAAGAAAGAGTTAATATGTCTACGGAACAGATTGAGAAATGGCTAAACGAGAGTTCAATGGCAAAGGAAGAGAGCAAAGCAGAAATGGAAAACGTTACTAGtttcaaatatgaaaatacCGTGAAAGTCAAGAGTGATGTTAGCCATATATCCATATCTACTAGAATACAGCATTTAGTTCGTCCTGTTAATATAAGCCTTGCGaaaacgatggaaaaaaatagttaCAAGCATAGTACAATTCAGAATAAAATAGCCCTTATACCGAATTCAAATCTCCAACATTCTCCACCTAAACAACAGGGGATACCTCCGAATCGCAACAGAATAAATGCTGACATAAAGGAGATCATTAAAGGCAGGAATATGAAAACTAGTAAAGACTCTTCCTTCGGTGAGGATAGCGATGCTGTGTCTAAATCTGATCATAACTCCGTCGACGGATCACCCGAGAAGAAGTCTCCGGAGAAAAAATCTGTGCAATTGAGAAAGCCTTTTCTGCCCAAAGTAAAAGAACGCAAGGATATCACTCCGAGTGCTAATGCATTTTCCCCAGAGAACGAAAGTAGTGTATATGCGTTTGAGAGTGATACCGAGACTCCAATAAGTACACCGTTTAGACGGAGACTTAAGGACATTGAGAATAAACCTGACAGTGTTCCTCTGGCTTCTGAGGATGAGGCCACAAAGACTGGAGAAGAGATTCAGGAAGGACAAAGTCAGCAGCCGTCTGATACTCTGAAATTGAATCGATTCGAATTACCAAAAAACTTTGCCAATCTTGCAACAATGCAGGTATTGCCTATAGACAAACTCACTACAAGTTGGAGCAATGTAGGATGCAGTGCTTCTATTGCTGTCCAAGTAAATTTGGACGAGCAATCCCAAGAGCCGCAAATTATTGCAGATGATTCTGTTCTCAAAAGCACTGAGATATCTACTCAAACAGATAGCAATAATGAAAATGACGACGATAACGATGGCCAGTTATTTTATATTCCTTTACAAGCTGTGACCAGAAATGGTCCTAATTTAGTACAGGGTCAACAGCTGATTCAAGGTGTTGCCGTTAAACTTGGTACTGAAGGTCCAACTGGTCCTAATCAAAGGGTTTTACTGAGAGCTAAACTAGTCACTAAACCACCTTCAACCGTAGCTCGATGCCCACCTGTGGGTACGGTACAACCAACGGCTCGCGTCCCTCAGAGTCCTACAGCTTCGATTATCGAGAATCCTGGTCCTTCAACTTCTACAAATGTACCTATACCCTCTACATCCAGCTTTCAGCATCCTTTGCCTAATAGAAATGTTATGGTAACGCAGACTACGACTAGACACAATGCTGCTACTGGAACCGGAACTAGTCTAGGATCAGAAAAGGTTCAAAAGTCTCCTAAGACTTctagagaaagaaaaacttcGATAGATTCTGTTAAAAGTGTTAAACGaTCTCAATCTAAGACGAAACAGAAAATATCAGAGTTCTGTTCGCCCACCAATACGACTACTTTTCCAAGCCCAAAGAATGCCAATGAAGAAGCACGTCTTGTGGAAGCACCCACTTTTCATCCGActgaaaaagattttcaagaTCCGTTGGAGTATATCGATAAAATACGACCAATTGCTGAGAAATTTGGAATATGTCGTGTAGTTCCACCACCAAACTTTAAACCTGAATGTAAAGTATCCGACGATATGCGATTTACTGCATATAATCAGTACGTTCATCGAATGCTGCACAGATGGGGGCCTAATGTGAAGGAAATGATGGCGATTAAAAAGTATTTAGCCACACAGAGCATCACTCTCACTCATCCTCCCTGgATCGGTGGGATGGAGGTAGACTTGCCACATTTGTATCAAACAGTGCAGAGCCTAGGTGGATTGAAagaagtaattgaaaaaaagaaatggcaGAAGGTTGCTGACGgtatgaaaattccaaaatcagCCCAAGATCGAGTGACAAAGTTGGATgatatttattgtaaatatttacTTCCATACGACACGCTTTCACCAGaggagagagaaaaactgTTCGACGAAGTAGAGACTGATTGGGCTAAACGAGAAAGCAAGGCTTTACAAACACAAACTGCACCATCTAGCGACAATGATGCTGAGGATGATGATGAGGATAGTTCTGATGAGACTGAGGAATGTATTGTCAAGGGGCGAAACATGCCGCTTAATGCTTTCTACCGCATCGCAAGAAACACACAGCGTATGTGGTTCGGTGAAAGTCAGCCACCAGCAGGAGAAGCGGAAGGTGCATCTGCAAACGATGTTGAAACAGCATTTTGGAAACATGTAGCAGAACGGAAGCGGCACGTTTGTGTTCACGCAGCCAGCATCGATTCTAGTGGTCGAGGTTTCGGATTTTCTGTTGCTAAGAACAGTCCGTTTGCTAGACATCCTTGGAATCTTAAAGTACTGACTAACAATGCTGGTTCAGTACTGAGAGCATTGGGACCTCTAATGGGTGTAACGGTTCCTACGCTACATGTTGGAATGTTATTCAGTGCCTGTTGTTGGTacagagatcctcacggtctACCATGGATAGAGTATCTTCATACTGGTGCTAAGAAAATCTGGTATGGTATTCCTGATGAACACAGTGACAACTTTAGAGATGCTCTGGCTAAAATGGTGCCACGTTATTGCAAGAACAAAACTATCTGGTTACCCTCTGATACAGCTATGGTCCCACCAGAATTACTTGTTAAAAATGGTGTACCGTTGTGCCAGACAGTGCAGGAGCCGGGACAATTTATTATCGTATTTCCTAAAGCCTTCACATCAAGCATTTGCACTGGATATCTCGTTTCTGAAAGCGTATACTTTGCACAATCTTCATGGCTCGTTACTGCGGAACAAGTTTTTAAGGACATACAGGAGAGCTGTGAACcgtcaatattttcatttgagAGACTGTTGTTCAGTATTATTAATGATACTAGATCTCACGTCGATGTACTTAAACAgatattacCAACTGTGATGAATATTCGTGAAAGAGAATTAGAGTATCGTAGATTATTGGAAAATGCTGGTCTGACAAATACCGAAAGGCTACCTTTACCTGACAGTGGAAAAcggagaagaggaaaaaaggtGAAGGAAGACGACGGGGACTTTGAGTGTGAAACTTGTCGTGCCAATCTGTTCGTTTCGCTAGTTAGCAATTCGCAAGATGATTGTGTCTATTGTCTTCCACATGCTTGTCAAATACTTACCAGGAAGAAACAGCTTTTGAAACACTGTACTTTGATGTACACTTACAGTGAGgTGGAGTTAGATGATCTCATTCATAAATTGGAGGATAAAATCGAAGCCAAATCTAAGAAGACTAATCAAATGAGACAAGCTAAATAG
Protein Sequence
MVLSRNDKRKRKEGDLVDLMDPLSESPKRTKVHAQRKFAQGVATIFGSTHPVIKEKEKAKPAVITELITHRRPNTEDFLTFLCFRGTPILPPSLDFFNNGNRKEKQGQKTAGNIVKNNSSSSAMSTPATDNPKPTITSQKLSSKNSTSTVDKKTTIQKSIAKYKTATSTVQALKKKYQEQRLAKQRIKNKFKPNCVMRTRSSTDQAKVKANSDLPSRKFLPKVETKRHCLRSSALVNKSKNLGTTKGKLDSPKPKKRTFVKDKSNDSSNTDVSSDDNSPILKSSLRKKGQTKVLKKVCTRSKSEMRRITRSHREPTQPQILSRRPSRKTKEAAAVYMEILGRKLVSPDLDNEDNLSVDSFPELPNARRYAQTENEIRAKVKQSSKLNSNSKDTKSENNKANSTRLSKDKVNKKVVKNKRPLKVQKYCELDSEDDSACSVQSENVKPVTRRSLGKLPEPTSRSLRSSPRNIVTKSHSEKVPKDKLEKDKILVKRKREQNIGKLTPAKSNVVKPKSTKSKIKSDSSESDEETLGMLLEKLNKKKVKTEPVKSEEKEKIKSENSPPANGTNVKYDTSKISDDEESFRGFSNKAITKVLNSCHTHVKANLLVSEETDGKLDVLKTQDTPQTDTSDIINDQFTVMETSVILPVNINPNYTLVKPVPEDLALSDCKSISPAQPLVTINPDKICNHDPSESTVNIIDMPRSASLGRKERVNMSTEQIEKWLNESSMAKEESKAEMENVTSFKYENTVKVKSDVSHISISTRIQHLVRPVNISLAKTMEKNSYKHSTIQNKIALIPNSNLQHSPPKQQGIPPNRNRINADIKEIIKGRNMKTSKDSSFGEDSDAVSKSDHNSVDGSPEKKSPEKKSVQLRKPFLPKVKERKDITPSANAFSPENESSVYAFESDTETPISTPFRRRLKDIENKPDSVPLASEDEATKTGEEIQEGQSQQPSDTLKLNRFELPKNFANLATMQVLPIDKLTTSWSNVGCSASIAVQVNLDEQSQEPQIIADDSVLKSTEISTQTDSNNENDDDNDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPSTVARCPPVGTVQPTARVPQSPTASIIENPGPSTSTNVPIPSTSSFQHPLPNRNVMVTQTTTRHNAATGTGTSLGSEKVQKSPKTSRERKTSIDSVKSVKRSQSKTKQKISEFCSPTNTTTFPSPKNANEEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEEREKLFDEVETDWAKRESKALQTQTAPSSDNDAEDDDEDSSDETEECIVKGRNMPLNAFYRIARNTQRMWFGESQPPAGEAEGASANDVETAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHSDNFRDALAKMVPRYCKNKTIWLPSDTAMVPPELLVKNGVPLCQTVQEPGQFIIVFPKAFTSSICTGYLVSESVYFAQSSWLVTAEQVFKDIQESCEPSIFSFERLLFSIINDTRSHVDVLKQILPTVMNIRERELEYRRLLENAGLTNTERLPLPDSGKRRRGKKVKEDDGDFECETCRANLFVSLVSNSQDDCVYCLPHACQILTRKKQLLKHCTLMYTYSEVELDDLIHKLEDKIEAKSKKTNQMRQAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2