Basic Information

Gene Symbol
Jarid2
Assembly
GCA_947538915.1
Location
OX384533.1:21879686-21886670[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.3e-23 2.9e-19 70.1 0.0 6 89 1299 1380 1295 1380 0.94

Sequence Information

Coding Sequence
ATGGTACTCAGTAGAAATGACAAAAGGAAGAGAAAGGAAGGTGATCTTGTCGATCTCATGGATCCTCTTTCCGAATCTCCAAAGAGAACCAAGGTCCATGCGCAAAGGAAGTTTGCTCAGGGTGTAGCGACCATATTTGGTCCGACACATCCTGCAATCAAAGAAAAGGAAAAGGCAAAGCCTGCGGTGATAACAGAACTGATAACTCACAGACGTCCGAACACTGAAGACTTTCTTACATTTTTATGTTTCAGAGGAACTCCGATCCTTCCTCCAAGCTTGGATTTCTTTAACGTTGGAAACAGGAAGGAAAAACAAGAGCAGAAAGCGGCTGGCAATACTGTGAAGAATAATTCATCGTCCTCTGCAATGTCGACTCCTGTTACAGACAACCCAAAACCGACTACAACTAGCCAGAAATTGAGCGGAAAAAACAGCAGCGGTTCTATTGATAAGAAGACTACGATACAAAAGAGTATTGCCAAGTATAAGACTGCCACCTCCACCGTTCAAGCACTGAAAAAGAAATACCAGGAACAACGTCTCGCAAAACAGAGAATAAAAAATAAATTTAAACCTACATGTGTTATGAGGACACGATCTTCTACTGATCAAGCTAAAATAAAAGCTAGCAGTAATTTGCCGCCTAGAAAGTTTTTGCCTAAAGTTGAGACCAAGAGACATTGTCTAAGGAGTAGCGCCCTTGCAAATAAGAGTAAGAATCTGGGTATTACAAAGGGGAAACCAGATTCTCCAAAACCTAAGAAGAGAACTTTTGTAAAAGATAAGTCTAACGACTCTTCTAACACAGATGTATCTTCTGACGACAATTCACCTGCCCTTAAATCTTCACACCGGAAAAAAGGACAGACTAAAATTCTTAAAAAAGTTTGCACTAGGAGTAAGTCCGAAATGAGAAGGATAACGAGATCTCATAGAGAGCCGACTCAGCCGCAAGTTCTATCTAGACGTCCTTCCAGGAAGACTAAAGAAGCTGCTGCTGTGTATATGGAAATTCTTGGCAGAAAATTAGTTAGTCCTGATTTAGATAACGAGGATAACTTGTCAGTCGACAGTTTTCCCGAGCTTCCGAATGCCAAGAGATATGCACAGACTGAAAATGAGATCCGAGCAAAAGTTAAACAATCTTCTAAATTGAATAGCAGTAGTAAAGATACAAAGCCTGAGAATAACAGAGCGAGTAGCACACGGCTCAGCAAAGATAAAGCTGATAAGAAAGTGGTGAAGAATAAAAGACCTTTGAAAGTACAAAAGTATTGCGAATTGGATAGTGAAGACGACTCAGCTTGTTCTGTACAGTCTGAGAACGTGAAACCTGTGACCAGAAGGAGTCTTGGAAAATTGCCTGAGCCGACCAGCAGAAGTCTTCGGTCTTCGCCAAGAATTATAGTGACAAAATCGCAGCCGGAAAAGATGCCGAAAGATAAGCCTGAGAAAGATAAAATAGTAGTGAAACGAAAGCAGGAACAAAATGCTGGAAAATTAACGCCTGCAAAGACTAACGTGGTTAAACCAAAGTCAACAAAAAGTAAGAATAAAAGCGATAGCTCTGAATCTGAGGAAGAAACTTTGGGTATGCTGCTTGATAAGTTGAATAAAAAGAAAGTCAAAACTGAGCCAGTTAAGGCGGAAGAAACAGAGAAGATAAAGAGCGAGAATAGCCCTCCAGCAAACGCTGTTAACGTCAAGTACGACACGTCTAAAATATCCGATGACGAAGAGTCTTTCAGAGGATTCTCTAATAAAGCTATAACTAAGGTCTTGAACTCTTGTCACACTCATGTTAAAGCCAATTTACTTGCATCCGAGGACACGGACGGGAAATTGGATGTGCTCAAAACACAAGACACGCCCCAAACGGATACCTCGGATATAAGAAATGACCAATTTTCAGTTATTGAGACTAGTGTGCTTCTGCCTGTAAATATAAGCCCAGATTATACATTAGTTAAGCCTGTCCCAGAAGATTCAGCGCTTTCAGACTGTAAGTCTATACCACCAGCCCAGCCTCTGCTTTCAATGAACCCAGAAAAAGTTTGTAATCATGAACCGAGCGAGTCTACAGTTAATATTATAGACATGCCTCGATCTGCTTCTCTCGGTCGCAAAGAAAGAGTTAACATGTCTACAGAGCAGATTGAAAAATGGCTAAACGAGAGCTCGATGGCGAAGGAAGAGAGCAAAGCCGAAATGGAAAACGTTACTAGTTTCAAATACGAGAATGCAGTGAAAGTCAAGAGCGATGTTAGCCATATATCCATATCTACCAGAATACAGCATTTGGTTCGGCCCGTTAACATAAGCCTGGCTAAAACAACGGAGAAAAATAGTTACAAGAATAATTTAATTCAGAATAAAATGGCTCTTATACCAAATTTAAATCTCCTACATTCTCCGCCTAAACAACAGGGCATACCCCCCAATCGCAACCGGATAAATGCTGATATAAAAGAGATCATCAAAGGCCGAAACATCAAGGCTAGTAAAGATTCTTCCTTCGGTGAGGATAGCGATGCCGTTTCTAAATCTGATCATAACTCTGTAGATGGATCACCAGAGAAAAAGTCTCCGGAAAAAAAATCAGTCCAATTGAAAAAGCCTTTTCTGCCCAAAGTAAAAGAACGTAAGGATATCACTCCGAGTGCTAATGCATTTTCACCTGAGAACGAAAGTAGTGTATATGCATTCGAGAGTGATACTGAGACTCCAATTAGTACTCCGTTTAGACGGAGACTTAAGGATATCGAGAATAAACCGGACAGTCTTCCTCTGGCTTCTGAGGATGAGGCCACGAAGACTGGAGAAGAGACGCAGGAAGGACAGAGTCAGCAGCCTTCTGATACTTCGAAACTGAATCGATTCGAATTACCTAAAAACTTTGCCGACCTTGCGACGATGCAGGTCTTGCCTATAGACAAGCTTACCACAAGCTGGAGCAATGTTGGATGCAGCGCTTCTATTGCCGTCCAAGTAAATCTGGACGAGCAATCCCAAGAGCCGCAGACCATAGCTGATGAGTCTGTCCTTAAAAGCACCGAGATATCTACTCAAACAGATAGTAATAATGAAAATGAATCAGATAACGATGGCCAGTTGTTTTATATTCCTTTACAAGCTATGACCAGAAATGGTCCTAACTTAGTACAGGGTCAACAGCTGATTCAAGGCGTTGCCGTTAAACTTGGTACCGAAGGTCCAACTGGTCCTAATCAAAGAGTCTTACTGAGAGCTAAACTAGTCACTAAACCACCTTCAACCGTAGCTCGATGCCCACCTGTGGGTACAGTACAACCAACCGCTCGTGTCCCTCAGAGTCCTACTGCTTTGATTATCGACAATTCTGGTCCTTCAACTTCTACAAATTTACCTATACCCTCTACATCCAGCTTTCAGCAACCTTTGCCGAATAGGAATGTTACGGTCACGCAGACTACGAGTAGACAGAACGCTGCTACTGGAACGGGAACCAGTCTGGGACCAGAAAAGGTTCAAAAGTCTCCTAAGACTTCTAGAGAAAGAAAAACATCGATAGATTCTGTTAAAAGCGTTAAACGACCTCAATCTAAATCCAAACAGAAAATATTAGAGTTCTGTTCTCCGACCAATACCACTACTTTTCCAAGTCCAAAGAATGCTAATGAAGAAGCACGTCTTGTTGAAGCACCCACTTTTCATCCGACTGAAAAAGACTTTCAAGATCCATTGGAATACATTGATAAAATACGACCTATTGCTGAGAAGTTTGGAATTTGTCGCGTCGTTCCACCACCGAACTTTAAACCCGAATGTAAAGTATCAGACGATATGCGATTCACTGCATACAATCAATACGTTCATAGAATGCTGCACAGATGGGGGCCTAATGTAAAGGAAATGATGGCAATAAAAAAGTATTTAGCCACACAGAGCATTACACTCACTCATCCCCCCTGGATTGGTGGTATGGAGGTAGACTTGCCGCACTTGTATCAAACAGTGCAGAGCCTAGGAGGGTTGAAAGAAGTAATTGAAAAAAAGAAATGGCAGAAGGTTGCTGACGGTATGAAAATACCAAAATCAGCCCAAGATCGAGTGACAAAATTGGATGATATTTATTGTAAATATTTATTGCCGTATGACACGCTTTCACCAGAGGAGAGAGAAAAACTATTCGACGAAGTAGAGACTGATTGGGCTAAACGAGAAAGCAAGGCTTTACAAACACAAACTGCACCATCCAGCGATAATGACGCAGAAGATGACGACGAGGATAGCTCTGATGAGACTGAGGAATGTATTGTCAAGGGGAGGAACATGCCACTGAATGCTTTCTACCGCATCGCACGAAACACACAACGTATGTGGTTTGGTGAAAGTCAGCCACCAGCAGGGGAGGCTGAAGGTGCATCTGCAAATGACGTTGAAACAGCATTTTGGAAACATGTAGCAGAACGGAAGCGGCATGTCTGTGTCCACGCAGCCAGCATCGATTCTAGCGGTCGAGGTTTTGGATTTTCTGTTGCTAAAAACAGTCCGTTTGCTAGACATCCTTGGAATCTTAAAGTACTGACTAACAATGCTGGTTCGGTACTGAGGGCATTGGGACCTCTAATGGGTGTAACCGTTCCGACCCTACATGTTGGAATGCTGTTCAGTGCCTGTTGTTGGTACAGAGATCCCCATGGTCTACCATGGATAGAGTATCTTCATACCGGTGCTAAAAAAATCTGGTATGGTATTCCGGATGAACACAGTGACAACTTTAGAGATGCTCTGTCCAAAATGGTGCCACGTTATTGCAAGAACAAAACGATTTGGTTGCCCTCCGACACAGCAATGGTCCCACCAGAATTACTCGTTAAAAATGGAGTTCCCTTGTGTCAGACCGTGCAGGAGCCAGGACAATTCATTATCGTGTTTCCCAAAGCTTTTACGTCGAGCATTTGCACTGGGTATCTCGTCTCTGAAAGCGTATACTTTGCACAAGCTTCATGGCTTGTTACTGCGGAACAAGTTTTCAAGGACATACAGGAGAGCTGTGAACCGTCAATATTTTCATTCGAGAGATTGCTGTTCAGTATTATTAATGATACTAGATCCCATGTTGAAGTACTTAAACAGATATTACCAACTGTGATGAATATTCGTGAAAGAGAATTAGAGTATCGTAGACTATTGGAAAACGCTAGTCTGACGAATACTGAAAGGCTACCTTTACCTGACAGTGGAAAACGGAGAAGAGGTAAAAAGGTGAAGGAAGAAGATGGGGACTTTGAGTGTGAAACTTGTCGTGCCAATCTGTTCGTTTCGCTAGTTAGCAATTCGCAAGATGATTGTGTCTACTGTCTTCCACATGCTTGTCAAATACTTACCAGGAAGAAACAGCTCTTGAAACACTGTACTTTGATGTACACGTATAGTGAGGTGGAGTTAGATGATCTCATTCATAAATTGGAGGATAAAATCGAAGCCAAATCTAAGAAGACTAATCAAATGAGACAAGCTAAATAA
Protein Sequence
MVLSRNDKRKRKEGDLVDLMDPLSESPKRTKVHAQRKFAQGVATIFGPTHPAIKEKEKAKPAVITELITHRRPNTEDFLTFLCFRGTPILPPSLDFFNVGNRKEKQEQKAAGNTVKNNSSSSAMSTPVTDNPKPTTTSQKLSGKNSSGSIDKKTTIQKSIAKYKTATSTVQALKKKYQEQRLAKQRIKNKFKPTCVMRTRSSTDQAKIKASSNLPPRKFLPKVETKRHCLRSSALANKSKNLGITKGKPDSPKPKKRTFVKDKSNDSSNTDVSSDDNSPALKSSHRKKGQTKILKKVCTRSKSEMRRITRSHREPTQPQVLSRRPSRKTKEAAAVYMEILGRKLVSPDLDNEDNLSVDSFPELPNAKRYAQTENEIRAKVKQSSKLNSSSKDTKPENNRASSTRLSKDKADKKVVKNKRPLKVQKYCELDSEDDSACSVQSENVKPVTRRSLGKLPEPTSRSLRSSPRIIVTKSQPEKMPKDKPEKDKIVVKRKQEQNAGKLTPAKTNVVKPKSTKSKNKSDSSESEEETLGMLLDKLNKKKVKTEPVKAEETEKIKSENSPPANAVNVKYDTSKISDDEESFRGFSNKAITKVLNSCHTHVKANLLASEDTDGKLDVLKTQDTPQTDTSDIRNDQFSVIETSVLLPVNISPDYTLVKPVPEDSALSDCKSIPPAQPLLSMNPEKVCNHEPSESTVNIIDMPRSASLGRKERVNMSTEQIEKWLNESSMAKEESKAEMENVTSFKYENAVKVKSDVSHISISTRIQHLVRPVNISLAKTTEKNSYKNNLIQNKMALIPNLNLLHSPPKQQGIPPNRNRINADIKEIIKGRNIKASKDSSFGEDSDAVSKSDHNSVDGSPEKKSPEKKSVQLKKPFLPKVKERKDITPSANAFSPENESSVYAFESDTETPISTPFRRRLKDIENKPDSLPLASEDEATKTGEETQEGQSQQPSDTSKLNRFELPKNFADLATMQVLPIDKLTTSWSNVGCSASIAVQVNLDEQSQEPQTIADESVLKSTEISTQTDSNNENESDNDGQLFYIPLQAMTRNGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPSTVARCPPVGTVQPTARVPQSPTALIIDNSGPSTSTNLPIPSTSSFQQPLPNRNVTVTQTTSRQNAATGTGTSLGPEKVQKSPKTSRERKTSIDSVKSVKRPQSKSKQKILEFCSPTNTTTFPSPKNANEEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEEREKLFDEVETDWAKRESKALQTQTAPSSDNDAEDDDEDSSDETEECIVKGRNMPLNAFYRIARNTQRMWFGESQPPAGEAEGASANDVETAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHSDNFRDALSKMVPRYCKNKTIWLPSDTAMVPPELLVKNGVPLCQTVQEPGQFIIVFPKAFTSSICTGYLVSESVYFAQASWLVTAEQVFKDIQESCEPSIFSFERLLFSIINDTRSHVEVLKQILPTVMNIRERELEYRRLLENASLTNTERLPLPDSGKRRRGKKVKEEDGDFECETCRANLFVSLVSNSQDDCVYCLPHACQILTRKKQLLKHCTLMYTYSEVELDDLIHKLEDKIEAKSKKTNQMRQAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00938450;
90% Identity
iTF_00939305;
80% Identity
-