Nlec007623.1
Basic Information
- Insect
- Neodiprion lecontei
- Gene Symbol
- Jarid2
- Assembly
- GCA_001263575.1
- Location
- NW:170457-179309[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 1.1e+04 -3.9 0.1 63 82 161 180 150 181 0.67 2 2 5.4e-23 9.8e-20 70.0 0.0 6 89 1305 1386 1301 1386 0.94
Sequence Information
- Coding Sequence
- ATGGTCCTTAGTAGAAATGACAAAAGGAAGAGAAGGGAAGGTGATCTTGTTGACCTCATGGACCCTCTTTCAGAATCTCCGAAAAGGACCAAAGTCCACGCGCAAAGAAAATTTGCCCAGGGTGTAGCGACTATATTTGGTTCCACGCAATCTTCTAtcaaggaaaaggaaaaggccAAGCCTGCAGTTATTACAGAATTGATAACTCATGGGCGTCCGAACACTGAAGACTTCTTAACATTCTTATGCTTCCGAGgTACGCCAATGCTGCCTCCcagtttagattttttcaatgttgGAAGTCGGAAAGTAAAGCAGGGCCAAAAATCTTCGATTAGCGTTGTTAAAAAGCCTATACCACCAACTTCAACATCTGGAACAGAAACACCTAAATCAACTACCAGTACACAGAAATCAAATGGGAAAGGCAGTAGTATTTCcaccgataaaaaaataactacaagtgagaaaaatatgacaaagtTTAAAACAAGTAAAATGGCAGCATCTGCCGTTGAGgcattgaagaaaaagtacCAAGAACAGCGTCTGGCAAAGCAAAGGATAAAGAACAAATTTAAACCTACATGCATAATGAGAACTCGGTCATCTACCGATAGAGCCAAAATGAAAACAGCAAGTATCGTTCCACCCAAAAAGTTTCTACCCAAGGTTGAAACAAAGAGACACTGTCTACGGAGTAGCGCCATTGctaataaaagtaaaaatgttgGAATCATAAAAGGAAAAGTAGAGTTGCCCAAAGCAAAAAAGAGATCACTTGTCAGAGAGAGATGTAATGATTCTTCAAATACCGACGTGTCTTCGGACGATAATTCACCAACTATTAGAGCGATGCTACGTTCAAAACGGCAGACCAGACAtgcaaaaaaagtttgcaCAAGAAGCAAGTCAGAAACGAGAAGAATAACTAGATCTCACCGAGAAACAATACAGGCTCAGGTTCTATCGAGACGCCCATCTAGAAAGACCAAAGAAGCAGCTGCGGTGTATATGGAAATTCTTGGTAGGAAATTAGTCAGTCCGGATTTAGATAATGAAGATAATTTATCGGTCGATAGTTTTCCCGAACTGCCAAATGCCAGAAGAATAGCGCAGAGGGAAAGTGAAATACGAGCTAAAGTAAAACAGACTTCGAAACTAAACAGTAACAAAGATGCCAAATCTGAGAATAGCAGGGGAAGCAGCACTCGGTTTTCCAAAGATAAAGTTGACAGGAGCATGGTAAAGAATAAGCGGCcgttaaaaatacaaaagtatTGCGAGTTGGACAGCGAAGACGATTCGGCATGTTCAGTGCAATCTGAGAATATTAAACCTGTGACGAGGAGAAGTCTTGGAAAGTTAGCTGAGTCAACGAGCAGAAGCCTCAGATCATCGCCGAGAAACGTGCCCTCTAAATTGCAGTCagaaaaaagtacgaaaactgaaaaagaaaaagtgatgGTGAAAAGAAAGCGGGATCAAAATTCTGGAAGATTAAAGGAAAGCCTTGTGAAGACTAGCGTACctaaacaaaaatcaaacaaatctaAGAGTAAAAGTGACAACTCTGAATCGGATGAAGAAACTTTAGGAATGCTGCTtgataaaatgatgaaaaagaaaaagaaaaatgagccGATCAAGTCTGTGAAAGTTGATAAAGCAAAGTCCGAAAATACACCTCCTCCAAATGTTGATGACAAATATGACACTTCAAAAATATCAGACGATGAAGAATCTTTTCGAGGGTTTTCTAATAAAGCCATATCAAAGGTCTTAAACTCGTGTCACACTCATGTTAAGGCTAATCTGCTTGCATCTGAGGAGGACAGCAGGAAATTAGATGTGCTTAAAACACATGGCTTGCCCGAAACGGATgcaatgaatataaaaaataagccTTCTTCTGATGTAGAAACAAGCGATTCTTTACCTGTGACTATAAATGTAAATGAGTCATCAACCAAACCTATTCCTGAAGACTTGAGTTTATCGGAGATCAAATCAGCACCACCAGTTATACCTGTAGTGTCAATGAATGTACacgaaatttataatcataatCCAAGCGATTCTACTGTTAATATAATTGACATGCCTCGGTCATCGTCTCTGGTACGAAAAGAAAGAGTGAACATGTCTACTGAACAGATTGAGAAATGGTTAAATGAAAGTTCCATGGCAAAAGAAGAGAGTAAAGCAGAAATGGAAAACGTTTCTGGttttaaatttgaagataCGGTGAAAGTAAAGAATGACGTCAGccatatatctatatctactAGAATTCAGCACTTAGTTCGGCCAGTCAAtataagtttttcaaaaacaactgaaaaaaataattacaagtaTAACAACGTAGTTCAGAATAAAATTCCACCAATATTAAATGTTCACGTACAACATTCTCCACCTAAGCAACAAGGAATACCAACAAATCGTAATAGAATAAATGCcgatataaaagaaattattaaagGAAGAAACATGAAAACTAGCAAAGATTCATCCTTCGGCGAGGACAGTGATGCTGTTTCTAAATCTGATCATAACTCTATCGATGGTTCGCCGGATAAGAAATCGCCAGACAAAAAATCCTTTCAGCCGCGAAAACCTTTTTTGCCCAAGGTAAAAGAACGTAAAGATATCACTCCGAGTGCAAATGCCTTTTCTCCAGAGAACGAAAGTAGCGTATATGCATTTGAAAGTGACAATGAAACTCCAATCAGTACACCGTTTCGGCGGAGGCTTAAGGACACTGACAACAAACCAGATAGTGTGCCTTTGATGTCCGAAGAGGAGGCCGCAAAAACTGAGGAAGAGACACAGAATGTTCAGAACCAGGATTCTGCTTCTGCTGATACTCCGAAGGCAAATCAATTCGAACTCCCAAAGATTTTTGCCGATCTAGCAACGATGCAGGTTTTGCCAATCGACAAACTGACTACAAGCTGGAGTAACGTTGGCTGCAGTACTTCTATAGCTGTGCAAGTGAATCTTGATGAGCAATCGCAAGAGCCGCAAACCACTACGACAGACGAATCGATCTTGAAAAGTACTGAAATATCAACTCAGACGGATGGTAACAATGATAATGAAGATGACAATGATGGgggtcaattattttatatacccTTACAAGCTGTTACCAGGAATGGTCCAAATTTGGTGCAGGGTCAACAATTGATTCAAGGCGTTGCTGTCAAACTTGGCACCGAGGGTCCAACTGGTCCAAACCAACGCGTTTTACTAAGAGCGAAACTAATTACTAAACCACCTTCTACAGTAGCTCGATGTCCACCCGTAGGTACGGTTCAGCCAACAGCTCGTGTACCGCAGAATTCATCAACTTCTGGACTTGACAATCCTGCTCCGTCAACTTCAACGAGTGTAGTACCTACACCATCTACGTCTAACTTTCAGCATCCCTTATCCAACAAAAGTTTTACACTAACGCAAACAACACAGCATCAAAATGTTTCTACTGCAACAGGAACTAGCTTAGTACCGGACAAAGTTCAAAAGTCTCCTAAAGCCtctagagaaagaaaaacatctaTAGATTCCGTGAAAAGCGGTAAACGATCTCAATCCAAGTCTAAACCAAAAACATCAGAGTTCTGTTCACCTAGCAATCCGACTACCTTTCCAAGCCCAAAAAATGCGGATGAAGAGGCTCGTCTTGTCGAAGCTCCTACGTTTCATCCAACCGAGAAAGATTTTCAAGACCCATTGGAGTACATTGATAAAATACGCCCTATTGCTGAGAAGTTTGGAATCTGTCGTGTAGTTCCACCGGTAAACTTTAAACCTGAATGTAAAGTATCGGATGACATGCGTTTTACAGCTTATAATCAATACGTTCATCGGATGTTGCATCGGTGGGGACCCAATGTTAAGGAAATGATGgctattaaaaaatatttggcaaCACAGAGTATCACTCTCACTCATCCTCCCTGGATTGGTGGTATGGAGGTAGATTTACCACACTTGTATCAAACGGTGCAGAGTCTAGGTGGCTTGAAGGAggtgattgagaaaaaaaaatggcagaaGGTGGCTGACGGgatgaaaattccaaaatctgCTCAGGACCGAGTTACTAAGTTGGATGATATctactgtaaatatttattgccgTATGACACGCTTTCGCCGGaggagagagaaaaactgTTCGATGAAGTAGAAACTGATTGGGCCAAGCGTGAGAGCAAGGCCTTGCAAACACAGACTGCACCTTCTAGTGATAATGACGCTGAAGACGACGATGAGGATAGTTCTGATGAAACTGAGGAATGTATTGTCAAAGGGAGAAATATGCCATTAAATGCATTCTACCGCATCGCACGAAATACACAACGTATGTGGTTCGGTGAGAGTCAACCACCATCTGGTGAAGCCGAGGGTGCAGCAGCAAATGAAGTTGAAGCAGCATTTTGGAAACATGTTGCAGAGAGGAAACGACACGTTTGTGTTCACGCAGCCAGTATTGACTCGAGCGGTCGGGGTTTTGGGTTTTCTGTTGCTAAAAACAGTCCGTTTGCTAGACATCCTTGGAATCTTAAAGTATTGACTAATAATGCTGGTTCGGTACTCAGAGCATTGGGGCCCTTAATGGGTGTTACTGTGCCAACGCTACATGTTGGAATGCTGTTCAGTGCATGTTGCTGGTACAGAGATCCTCACGGTCTGCCGTGGATAGAATATTTGCATACAGGggctaaaaaaatttggtatggGATTCCTGATGAGCACAGTGACAACTTTAGAGATGCTTTGGCTAAAATGGTACCACGATATTGCAAGAATAAAACGATCTGGTTACCGTCGGACACGGCCATGGTCCCACCAGAATTGCTTGTGAAAAATGGTGTTCCCCTATGCCAGACAGTGCAAGAGCCCGGACAGTTCATTATTGTATTTCCTAAAGCCTTCACCTCTAGTATATGCACTGGGTATGTTGTTTCTGAAAGTGTATACTTTGCACAATCGTCCTGGCTCGTTACTGCGGAACAAGTATTCAAGGATATACAGGAGAGCTGTGAGccatcaatattttcatttgaaagaCTGTTGTTCAGTATTATTAATGATACTAGATCCCATGTCGATGTACTTAAACagATATTACCAACTGTGATGAATATTCGGGAGAGAGAATTAGAATATCGTAGACTACTGGGAAATGCCGGTCTAACGAATACTGAGAGGCTACCCTTACCTGATAGTGGAAagcgaagaagaggaaaaaaagttaagGAAGACGACAGTGACTTTGAGTGCGAAACCTGTCGTGCCAATCTGTTCGTTTCACTAGTGAGCAACTTGCAGGACGATTGTGTCTATTGTCTTCCACATGCTTGTCAGATACTTACGAGGAAAAAACAGCTTCTGAAACACTCTACGCTTATGTACACATATAGTGAGgcGGAGTTGGATGATCTCATACATAAATTGGAGGATAAAATCGAAGCCAAATCTAAGAAGACTAATCAAATGAGACAAGCTAAATag
- Protein Sequence
- MVLSRNDKRKRREGDLVDLMDPLSESPKRTKVHAQRKFAQGVATIFGSTQSSIKEKEKAKPAVITELITHGRPNTEDFLTFLCFRGTPMLPPSLDFFNVGSRKVKQGQKSSISVVKKPIPPTSTSGTETPKSTTSTQKSNGKGSSISTDKKITTSEKNMTKFKTSKMAASAVEALKKKYQEQRLAKQRIKNKFKPTCIMRTRSSTDRAKMKTASIVPPKKFLPKVETKRHCLRSSAIANKSKNVGIIKGKVELPKAKKRSLVRERCNDSSNTDVSSDDNSPTIRAMLRSKRQTRHAKKVCTRSKSETRRITRSHRETIQAQVLSRRPSRKTKEAAAVYMEILGRKLVSPDLDNEDNLSVDSFPELPNARRIAQRESEIRAKVKQTSKLNSNKDAKSENSRGSSTRFSKDKVDRSMVKNKRPLKIQKYCELDSEDDSACSVQSENIKPVTRRSLGKLAESTSRSLRSSPRNVPSKLQSEKSTKTEKEKVMVKRKRDQNSGRLKESLVKTSVPKQKSNKSKSKSDNSESDEETLGMLLDKMMKKKKKNEPIKSVKVDKAKSENTPPPNVDDKYDTSKISDDEESFRGFSNKAISKVLNSCHTHVKANLLASEEDSRKLDVLKTHGLPETDAMNIKNKPSSDVETSDSLPVTINVNESSTKPIPEDLSLSEIKSAPPVIPVVSMNVHEIYNHNPSDSTVNIIDMPRSSSLVRKERVNMSTEQIEKWLNESSMAKEESKAEMENVSGFKFEDTVKVKNDVSHISISTRIQHLVRPVNISFSKTTEKNNYKYNNVVQNKIPPILNVHVQHSPPKQQGIPTNRNRINADIKEIIKGRNMKTSKDSSFGEDSDAVSKSDHNSIDGSPDKKSPDKKSFQPRKPFLPKVKERKDITPSANAFSPENESSVYAFESDNETPISTPFRRRLKDTDNKPDSVPLMSEEEAAKTEEETQNVQNQDSASADTPKANQFELPKIFADLATMQVLPIDKLTTSWSNVGCSTSIAVQVNLDEQSQEPQTTTTDESILKSTEISTQTDGNNDNEDDNDGGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLITKPPSTVARCPPVGTVQPTARVPQNSSTSGLDNPAPSTSTSVVPTPSTSNFQHPLSNKSFTLTQTTQHQNVSTATGTSLVPDKVQKSPKASRERKTSIDSVKSGKRSQSKSKPKTSEFCSPSNPTTFPSPKNADEEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPVNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEEREKLFDEVETDWAKRESKALQTQTAPSSDNDAEDDDEDSSDETEECIVKGRNMPLNAFYRIARNTQRMWFGESQPPSGEAEGAAANEVEAAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHSDNFRDALAKMVPRYCKNKTIWLPSDTAMVPPELLVKNGVPLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQSSWLVTAEQVFKDIQESCEPSIFSFERLLFSIINDTRSHVDVLKQILPTVMNIRERELEYRRLLGNAGLTNTERLPLPDSGKRRRGKKVKEDDSDFECETCRANLFVSLVSNLQDDCVYCLPHACQILTRKKQLLKHSTLMYTYSEAELDDLIHKLEDKIEAKSKKTNQMRQAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00938450;
- 90% Identity
- iTF_01048682;
- 80% Identity
- -