Lbel019001.1
Basic Information
- Insect
- Lysandra bellargus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_905333045.1
- Location
- HG995334.1:8041153-8050950[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-70 5.3e-66 223.6 24.3 1 297 103 385 103 387 0.86 2 2 0.093 2.7e+03 -2.0 6.3 1 39 384 426 384 433 0.76
Sequence Information
- Coding Sequence
- ATGGGGAATAAATCGGAGGTCGCAACCCCCGAGAATACGGACGAGGAGAGCGGGGAGGCCTTCACTGACGGCGACTTCGGTGACTCCGACGACGACACTACTGTCGTGGAACGCAGCCCTGACTCCAAGCTGCCCGTTGTCGAGACCGTCAACGGCGAAATTGTGGAAGATGCCAAAGAAAAGCTAGCGAATGGACACGCGGACTCGGAGAGCAGCGAGGGCGAGAAGGTGGAGGTGGACGGACGGCGGGACTCACACTGCAGCACCAGCTCCATAGTGGGCATCCTCGGGGATCAACAAAACCATGCGGAACAGCGTCTGGCGGCGCGGCGTGCGGCACGGGCGGAGGCGCGCGAGATCCGCATGCGGGAGCTGGAGCGGCAGCAGCGTGAGCAGGAGGACCACGCCGACAAAGCCTACGACATGTACGCAGAGACAGTAGGCAGACGGGCGGGCGGGCGGCTCGCGGCGCTCAGCCCCGCCGCGCATTCTCCGCGCCGCGCCTCCGAGGACTCCGACGACGTGCTCGGCGTCAAGGACCTCCGGCACGAGCTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTCACCGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCGGCTCGAGCTGCTGGCCGACCGCTTGGAGGAGCTGCACGAGGAGCACGCGCAGCTGCAGCGCGAGCACCGCGACCGCTGCTCCGCGCACGAGCGCCTGCGACGCGAGCACGAGGCGCTGGAGCGGGAGCTGGCGCGCGCGCGGGACGCCGTGCGGGCACGCGACTCCGCCGCCGCTGCCGCCGGGTTCGCCTTCGTGGACGCCGCCGCCGCGCCCGACGCGCCCGCGTCCGGGGAGTCGCACGGCTCCGTGCCGCCACTCGCGCTCGTCTCGCACGCCTCCGAGCGCCTGCTCGACGACGCCGGCGAGGGCACGCTAGATGTCCGATTACAAAACTTGGTAAGCTCGAAGCAGGCGCTGGAGGGCGAGGTGCGGAAACTGAAGTTGCAGCTGAACGACGAGCGCGCGGCGCGGCAGAACGGCGCCGCCTCACATCACGACCGCGAGCATGAGAGCGAGCTGGAGACACTCCGCAAGGCGGTATCTGAGGCGAAGGGTCGGGCGGCGCGAGCGGAGGCGGAGGCGGCGCTGCAGGCGGCGGCGGTGGCGCGGCTCGAGGCGCAGGCTCGGGAGGCGCTGAATCGTGTTGAGGAACTGGAGACGGAGAATAAACACCTCACCAAGCGGCTCGACAAGCTCAAAAACGCCAAGTCCGCGCTGCTCAAGGACCTGTGA
- Protein Sequence
- MGNKSEVATPENTDEESGEAFTDGDFGDSDDDTTVVERSPDSKLPVVETVNGEIVEDAKEKLANGHADSESSEGEKVEVDGRRDSHCSTSSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGGRLAALSPAAHSPRRASEDSDDVLGVKDLRHELKEVEEKFRKAMILTAQLDNDKAALGYRLELLADRLEELHEEHAQLQREHRDRCSAHERLRREHEALERELARARDAVRARDSAAAAAGFAFVDAAAAPDAPASGESHGSVPPLALVSHASERLLDDAGEGTLDVRLQNLVSSKQALEGEVRKLKLQLNDERAARQNGAASHHDREHESELETLRKAVSEAKGRAARAEAEAALQAAAVARLEAQAREALNRVEELETENKHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00164385;
- 90% Identity
- iTF_00405927;
- 80% Identity
- -