Basic Information

Gene Symbol
-
Assembly
GCA_905333045.1
Location
HG995324.1:7580857-7583046[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.8 3.9e+03 -1.3 0.0 3 19 151 167 151 169 0.90
2 6 1.7 2.4e+03 -0.6 0.0 22 33 227 238 224 241 0.87
3 6 3.2e-08 4.4e-05 24.2 0.2 1 45 258 304 258 305 0.94
4 6 1.1e-08 1.5e-05 25.6 0.1 3 45 313 359 311 360 0.93
5 6 9.7e-10 1.3e-06 29.0 0.0 1 44 364 407 364 409 0.96
6 6 2.6e-07 0.00035 21.3 0.0 3 45 416 460 414 461 0.93

Sequence Information

Coding Sequence
ATGAGCGACGGAGAATCTGATATATCTCTCAGTGATGAAGAAAACGATATTCAGGATTTAGAACAGTTGAATGCCGTTCTGAGCGAAGACGATGATTGTCCAAGCACTTCGGTTTCCCAGTATTCTGCAACAAGAAGTTTATTTTCCATTGATCAATCTGAACAGACATCAAAAATTGATGCCGCAATAGCTTTGAACAATATGTACGACGAGAAACTACGACGTCTCGAATCGATACTTAATAACCGACTTAAGGAGTGCCAGGAAAGATTAAAAGACATCCAGTTCTCGACGGATGAAGCAGAAAACAAAGCAGAAGTCTTTTACTATGTCAGCTGCGGTAGACCGTACTTCAAGGACTCAACAAACTTTCCAGCCCCAGATAATGATGATACAATCTTTATGAACAAATCCAAAATGTACGACTTCTCAACTGTATCTTCGGTTATCAGCTGGACTGTAAAAGATAAAAGTAATTTTTTGAACTTGCTCCATAAAATGTCCAAGGAAATACGTAAGAAAGAGTTACAATCGAGCATCTCTGATTTAAATCGTCAGTTGAAGAGTAGTCCTAAGAAAAAAGACATACAAAAGAAAATTAGCAGCCTCAACTTACAAATAACTAAAGTAAACGACATGTCTCTCAATGAATTAGCTCTGCCAATTGACAAAGATTATGATTGGCTAGCCATAGCTAATATGTTAAAAAATAGACACACAGCAGGTGAATATCAGTCCCTCTGGCAATTATTCCTCCATCCCTCCATTAACAAGAAACCTTGGAGTAAAGCTGAGCATACTGCTCTACAGAAGATTTGTTACGAAGAAAACTTGCAGGATTGGGATAAAATAGCAAGAAGGTTGAATACAGGGCGCACAAACTATCAGTGCTTTGTTTACTTCAGGACAAATATGAGTAACACATTCACTGGCAGAAAATGGAGCCCCGAGGAAGTCGAGTATCTCAAAAGACTAATTGATTATTACAAGGAGGATAATTACATTCCATGGGGAAAAGTGGCCACGTCAATGGAGAACAGGACTAAGATACAAATATACAACAAGTATCTAAGCCTACGCCAGCAGAGGAAAGGCAGATTTTTACCCGAAGAAGATACAGTTATATTGACATGCGCAGAAAACTTTGGACCTGATTACCAAAAAATGAGTCAATATCTTCCAGGACGTTCCATCGGTCAATGCAGAATGAGGTATCAGGTTTTAAGAAAGACCAGAATATCAAAAGTGTGGACAATAGATGAAGACAAACGTCTTATACAACTGATGGCCAATCAAGATTCTGCTATAAATTTTTCAAGTATCACCAAATACTTCCCCGGTAAAGACAGAATTAACATTAGAAGCAGATACTTAACATTGACAAATTGGATGAAACGCTACCCTAATATAGACGTTTCTAAAGCACCGAGACGAGGTGCCCGTAGATTGGGGCATGGTTTACAAGCCGATAATTTGAACAAAGCTATAGAGGAGCTAAAAAATCGCATACAGACGGAGGTGAATGATGTCAAAAACAAAAAAGTTAGCCCAGAATCTCCACACGAGGTTTTAGATGATGCGATAGTAGCATATCTAGCCACTGAGCATGTGAACATAGAGGAGGCTAGGAAATTGGAGGAGTTCAGAAAACTAGACGAGAAAACAAAGCAAGACAGTTGTAAGGCTCTGCAATCTAGGAGCAATGTCAAATCTAATTTAAGAGACCTCAGAGCAATACTGACGCTTCTTAGAGTTAAGCTGAATAAAGAGAGATACAAAAGAAGCGTACCCAAAAGATATAGGGGACTACTAGAGCCTGATCCAGATCTTATTGTGTCTCAAGTAAAATCCTATTCTAAGAAGAGTCCTGAGGTGAATGTTCGCGTTGACGACTTACCTGACATTTGGGGTACTCAGAGATTGGGTCCTCTGGAATATGTACTTCCCGCAAATTATTCCACTATTACGGGCTGTAAAAAGCTACTGTCATATGTATCTGATAAGCCCTCAAATGATAATATTGTGAATATTAAGATTTTGGCAAGAAAAAATCTCTTTTTGAAAGAACAAATGTTTCTACTCATGGAAAGATTTAATGTTCTCTTTTTATGGCCAATGCTTCTATCCAATGCTCCTCCTGATCTAGCTCTTACAGAACAAGCCAGTAATGAAGATGAAGAATTATTTTGA
Protein Sequence
MSDGESDISLSDEENDIQDLEQLNAVLSEDDDCPSTSVSQYSATRSLFSIDQSEQTSKIDAAIALNNMYDEKLRRLESILNNRLKECQERLKDIQFSTDEAENKAEVFYYVSCGRPYFKDSTNFPAPDNDDTIFMNKSKMYDFSTVSSVISWTVKDKSNFLNLLHKMSKEIRKKELQSSISDLNRQLKSSPKKKDIQKKISSLNLQITKVNDMSLNELALPIDKDYDWLAIANMLKNRHTAGEYQSLWQLFLHPSINKKPWSKAEHTALQKICYEENLQDWDKIARRLNTGRTNYQCFVYFRTNMSNTFTGRKWSPEEVEYLKRLIDYYKEDNYIPWGKVATSMENRTKIQIYNKYLSLRQQRKGRFLPEEDTVILTCAENFGPDYQKMSQYLPGRSIGQCRMRYQVLRKTRISKVWTIDEDKRLIQLMANQDSAINFSSITKYFPGKDRINIRSRYLTLTNWMKRYPNIDVSKAPRRGARRLGHGLQADNLNKAIEELKNRIQTEVNDVKNKKVSPESPHEVLDDAIVAYLATEHVNIEEARKLEEFRKLDEKTKQDSCKALQSRSNVKSNLRDLRAILTLLRVKLNKERYKRSVPKRYRGLLEPDPDLIVSQVKSYSKKSPEVNVRVDDLPDIWGTQRLGPLEYVLPANYSTITGCKKLLSYVSDKPSNDNIVNIKILARKNLFLKEQMFLLMERFNVLFLWPMLLSNAPPDLALTEQASNEDEELF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00744581;
80% Identity
-