Lcor003802.1
Basic Information
- Insect
- Lysandra coridon
- Gene Symbol
- -
- Assembly
- GCA_905220515.1
- Location
- HG992056.1:8135355-8137544[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.7 3.8e+03 -1.3 0.0 3 19 151 167 151 169 0.90 2 6 1.7 2.3e+03 -0.6 0.0 22 33 227 238 224 241 0.87 3 6 3e-08 4.3e-05 24.2 0.2 1 45 258 304 258 305 0.94 4 6 1.1e-08 1.5e-05 25.6 0.1 3 45 313 359 311 360 0.93 5 6 9.3e-10 1.3e-06 29.0 0.0 1 44 364 407 364 409 0.96 6 6 2.4e-07 0.00034 21.3 0.0 3 45 416 460 414 461 0.93
Sequence Information
- Coding Sequence
- ATGAGCGACGCAGAATCTGATATATCTCTCAGTGATGAAGAAAACGATATTCAGGATTTAGAACAGTTGAATGCCGTTCTAAGCGAAGACGATGATTGTCCAAGCACTTCGGTTTCCCAGTATTCTGCAACAAGAAGTTTATTTTCCATTGATCAATCTGAACAGACATCAAAAATTGATGCCGCAATAGCTTTGAACAATATGTACGACGAGAAACTACGACGTCTCGAATCGATACTTAATAACCGACTTAAGGAGTGCCGGGAAAGATTAAAAGACATCCAGTTCTCGACGGATGAAGCAGAAAACAAAGCAGAAGTCTTTTACTATGTCAGCTGCGGTAGACCGTACTTCAAGGACTCAACAAACTTTCCAGCCCCAGATAATGATGATACAATCTTTATGAACAAATCCAAAATGTACGACTTCTCAACTGTATCTTCGGTTATCAGCTGGACCGTAAAAGATAAAAGTAATTTTTTGAACTTGCTCCATAAAATGTCCAAGGAAATACGTAAGAAAGAGTTACAATCGAGCATCTCTGATTTAAATCGTCAGTTGAAGAGTAGTCCTAAGAAAAAAGACATACAAAAGAAAATTAGCAGCCTCAACTTACAAATAACTAAAGTAAACGACATGTCTCTCAATGAATTAGCTCTGCCAATTGACAAAGATTATGATTGGCTAGCCATAGCTAATATGTTAAAAAATAGACACACAGCAGGTGAATATCAGTCTCTCTGGCAATTATTCCTCCATCCCTCCATTAACAAGAAACCTTGGAGTAAAGCTGAGCATACTGCTCTACAGAAGATTTGTTACGAAGAAAACTTGCAGGATTGGGATAAAATAGCAAGAAGGTTGAATACAGGGCGCACAAACTATCAGTGCTTTGTTTACTTCAGGACAAATATGAGTAACACATTCACTGGCAGAAAATGGAGCCCCGAGGAAGTCGAGTATCTCAAAAGACTAATTGATTATTACAAGGAGGATAATTACATTCCATGGGGAAAAGTGGCCACGTCAATGGAGAACAGGACTAAGATACAAATATACAACAAGTATCTAAGCCTACGCCAGCAGAGGAAAGGCAGATTTTTACCCGAAGAAGATACAGTTATATTGACATGCGCAGAAAACTTTGGACCTGATTACCAAAAAATGAGTCAATATCTTCCAGGACGTTCCATCGGTCAATGCAGAATGAGGTATCAGGTTTTAAGAAAGACCAGAATATCAAAAGTGTGGACAATAGATGAAGACAAACGTCTTATACAACTGATGGCCAATCAAGATTCCGCTATAAATTTTTCAAGTATCACCAAATACTTCCCCGGTAAAGACAGAATTAACATTAGAAGCAGATACTTAACGTTGACAAATTGGATGAAACGCTACCCTAATATAGACGTTTCTAAAGCACCGAGACGAGGTGCCCGTAGATTGGGGCATGGTTTACAAGCCGATAATTTGAACAAAGCTATAGAGGAGCTAAAAAATCGCATACAGACGGAGGTGAATGATGTCAAAAACAAAAAAGTTAGCCCAGAATCTCCACACGAGGTTTTAGATGATGCGATAGTAGCATATCTAGCCACTGAGCATGTGAACATAGAGGAGGCTAGGAAATTGGAGGAGTTCAGAAAACTAGACGAGAAAACAAAGCAAGAGAGTTGTAAGGCTCTGCAATCTAGGAGCAATGTCAAATCTAATTTAAGAGACCTCAGAGCAATACTGACGCTTCTTAGAGTTAAGCTGAATAAAGAGAGATACAAAAGAAGCGTACCCAAAAGATATAGGGGACTACTAGAGCCTGATCCAGATCTTATTGTGTCTCAAGTAAAATCCTATTCTAAGAAGAGTCCTGAGGTGAATGTTCGCGTTGACGACTTACCTGACATTTGGGGTACTCAGAGATTGGGTCCTCTGGAATATGTACTTCCCGCAAATTATTCCACTATTACGGGCTGTAAAAAGCTACTGTCATATGTATCTGATAAGCCCTCAAATGATAATATTGTGAATATTAAGATTTTGGCAAGAAAAAATCTCTTTTTGAAAGAACAAATGTTTCTACTCATGGAAAGATTTAATGTTCTCTTTTTATGGCCAATGCTTCTATCCAATGCTCCTCCTGATCGAGCTCTTACAGAACAAGCCAGTAATGAAGATGAAGAATTATTTTGA
- Protein Sequence
- MSDAESDISLSDEENDIQDLEQLNAVLSEDDDCPSTSVSQYSATRSLFSIDQSEQTSKIDAAIALNNMYDEKLRRLESILNNRLKECRERLKDIQFSTDEAENKAEVFYYVSCGRPYFKDSTNFPAPDNDDTIFMNKSKMYDFSTVSSVISWTVKDKSNFLNLLHKMSKEIRKKELQSSISDLNRQLKSSPKKKDIQKKISSLNLQITKVNDMSLNELALPIDKDYDWLAIANMLKNRHTAGEYQSLWQLFLHPSINKKPWSKAEHTALQKICYEENLQDWDKIARRLNTGRTNYQCFVYFRTNMSNTFTGRKWSPEEVEYLKRLIDYYKEDNYIPWGKVATSMENRTKIQIYNKYLSLRQQRKGRFLPEEDTVILTCAENFGPDYQKMSQYLPGRSIGQCRMRYQVLRKTRISKVWTIDEDKRLIQLMANQDSAINFSSITKYFPGKDRINIRSRYLTLTNWMKRYPNIDVSKAPRRGARRLGHGLQADNLNKAIEELKNRIQTEVNDVKNKKVSPESPHEVLDDAIVAYLATEHVNIEEARKLEEFRKLDEKTKQESCKALQSRSNVKSNLRDLRAILTLLRVKLNKERYKRSVPKRYRGLLEPDPDLIVSQVKSYSKKSPEVNVRVDDLPDIWGTQRLGPLEYVLPANYSTITGCKKLLSYVSDKPSNDNIVNIKILARKNLFLKEQMFLLMERFNVLFLWPMLLSNAPPDRALTEQASNEDEELF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00744581;
- 90% Identity
- iTF_00933700;
- 80% Identity
- -