Basic Information

Gene Symbol
-
Assembly
GCA_905147365.1
Location
LR990277.1:5415627-5417813[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1.4 1.9e+03 -0.5 0.0 22 33 227 238 223 242 0.87
2 5 2.5e-08 3.2e-05 24.4 0.2 1 45 258 304 258 305 0.94
3 5 1.6e-08 2.1e-05 25.0 0.1 3 44 313 358 311 359 0.94
4 5 4.3e-11 5.5e-08 33.2 0.0 1 44 364 407 364 409 0.96
5 5 2.3e-07 0.0003 21.3 0.0 3 45 416 460 414 461 0.93

Sequence Information

Coding Sequence
ATGAGTGACGGAGAATCTGATATATCTCTTAGTGATGAAGAAAACGATATTCAGGATTTAGAACAGTTGAATGCCGTTCTAAGCGAAGACGATGATTGTCCAAGCACTTCGGTTTCCCAGTATTCTGCAACAAGAAGTTTATTTTCCGTTGATCAATCTGAACAGACATCAAAAATCGATGCCGCAATAGCTTTGAACAATATGTACGACGAGAAACTACGACGTCTCGAATCGATACTTAATGACCGACTTAGGGAGTGCCGGGAAAGATTAAAAGACATCCAGTACTCGACGGATGATGCAGAAAACAAAGCAGAAGTCTTTTACTATGTCAGCTGCGGTAGACCGTACTTTAAGGACTCAACAAACTTTCCAGCCCCAGATAATGATGATACAATCCTTATGAACAGATCCAAAATGTACGACTTCTCAACTGTATCTTCGGTTATCAGCTGGACCGTAAAAGATAAGAGTTATTTTTTGAACTTGCTCCTTAAAATGTCTAAGGAAATACGTAAGAAAGAGTTACAATCGAGCATATCTGATTTAAATCGCCAGTTGAAGAGTAGCCCTAAGAAAAAAGACATACAAAAGAAAATAAGCAGCCTCAACTTACAAATAACTAAAGTAAACGACATGTCTCTCAAAGAATTAGCTCTGCCAATTGACAAAGATTATGATTGGTTAGCCATTGCTAATATGTTAAAAAACAGACACACAGCAGGTGAATATCAGTCCCTCTGGCAATTATTCCTCCATCCCTCCATTAACAAGAAACCTTGGAGTAAAGCTGAGCATACTGCTCTACAGAGGATTTGTTATGAAGAAAACTTGCAGGACTGGGATAAAATAGCAAAAAGATTAAATACAGGGCGTACAAACTATCAGTGCTTTGTTTACTTCAGGACAAATATGAGTAACACATTCACTGGCAGAAAATGGAGCCCCGAGGAAGTTGAGTATCTCAAAAGACTAATTGATTATTACAAGGAGGATAATTACATTCCATGGGGAAAAGTGGCGACATCAATGGAGAACAGGACTAAGATACAAATATACAACAAGTATCTAAGCCTATGCCAGCAGAGAAAAGGCAGATTTTTACCTGAAGAAGATGCAGTTATACTGACATGCGCAGAAAACTTTGGACCTGATTACCAAAAAATGACTCAATATCTTCCAGGACGTACCACTAATCAATGCAGAATGAGGTATCAGGTTTTAAGAAAGACCAGAATATCAAAAGTGTGGACAATAGATGAAGACAAACGTCTTATACAACTGATGGCCAATCAAGATTCAGCTATAAATTTTTCAAGTATCACCAAATACTTCCCCGGTAAAGACAGAATTAACATAAGAAGCAGATACTTAACATTAACAAATTGGATGAAACGTTACCCTAATATAGATGTTTCTAAAGCACCGAGACGAGGTGCCCGTAGATTGGGGCACGGTTCACAAGCCGATAATTTGAACAAAGCAATAGAGGAGCTAAAAAATCGCATACAGACGGAGGTGAATGATGTCAAAAATAAAAAAGTTAGCCCAGAATCTCCACACGAGGTTTTAGATGATGCGATAGTAGCATATCTAGCAACCGAGCATGTGAACATAGAGGAGGCCAGGAAATTGGAGGAGTTCAGAAAACTAGACGAGAAAACATTGCAAGGCAATTGTAAAACTCTGCAAACTAGGAGCAATGTCAAATCAAATTTAAGAGACCTTAGAGCAATACTGACACTACTTAGAGTTAAGCTGAACAAAGAAAGATACAAGAGAAGTGTACCCAAAAGATATAGGGGACTACTGGAGCCTGATCCAAATCTTATTGTGTCTCAAGTAAAATCCTATTCTAAGAAAAATCCTGAGGTGAATGTTCCTGTTGATGACTTACCCGACATTTGGGGTACTCAGAGATTGGGTCCTCTGGAGTATGTGCTTCCTGCAAATTATTCCACTCTTACGGGTTGTAAGAAGCTACTATCGTACATATCTGATAAGCCCTCAAATGATAATATTGTGAATATTAAGATTTTGTCAAGAAAAAATCTCTTTTTGAAAGAACAAATGTTTCTACTCATGGAAAGGTTTAATGTTCTCTTTTTGTGGCCAATGCTTTTATCCAATGCTCCTCCTGATCGAGCTCTTACAGAGCAAACCAGTAATGAAGATGAAGAAGAATAA
Protein Sequence
MSDGESDISLSDEENDIQDLEQLNAVLSEDDDCPSTSVSQYSATRSLFSVDQSEQTSKIDAAIALNNMYDEKLRRLESILNDRLRECRERLKDIQYSTDDAENKAEVFYYVSCGRPYFKDSTNFPAPDNDDTILMNRSKMYDFSTVSSVISWTVKDKSYFLNLLLKMSKEIRKKELQSSISDLNRQLKSSPKKKDIQKKISSLNLQITKVNDMSLKELALPIDKDYDWLAIANMLKNRHTAGEYQSLWQLFLHPSINKKPWSKAEHTALQRICYEENLQDWDKIAKRLNTGRTNYQCFVYFRTNMSNTFTGRKWSPEEVEYLKRLIDYYKEDNYIPWGKVATSMENRTKIQIYNKYLSLCQQRKGRFLPEEDAVILTCAENFGPDYQKMTQYLPGRTTNQCRMRYQVLRKTRISKVWTIDEDKRLIQLMANQDSAINFSSITKYFPGKDRINIRSRYLTLTNWMKRYPNIDVSKAPRRGARRLGHGSQADNLNKAIEELKNRIQTEVNDVKNKKVSPESPHEVLDDAIVAYLATEHVNIEEARKLEEFRKLDEKTLQGNCKTLQTRSNVKSNLRDLRAILTLLRVKLNKERYKRSVPKRYRGLLEPDPNLIVSQVKSYSKKNPEVNVPVDDLPDIWGTQRLGPLEYVLPANYSTLTGCKKLLSYISDKPSNDNIVNIKILSRKNLFLKEQMFLLMERFNVLFLWPMLLSNAPPDRALTEQTSNEDEEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00744581;
90% Identity
iTF_00933700;
80% Identity
-