Basic Information

Gene Symbol
-
Assembly
GCA_905404155.1
Location
FR989947.1:4999584-5001779[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2.6 3.9e+03 -1.5 0.0 3 18 151 166 151 167 0.90
2 5 3.2e-08 4.8e-05 23.8 0.2 1 45 258 304 258 305 0.94
3 5 2.2e-09 3.4e-06 27.5 0.1 3 45 313 359 311 360 0.94
4 5 1e-11 1.5e-08 35.0 0.0 1 45 364 408 364 409 0.96
5 5 3.1e-07 0.00047 20.6 0.0 3 44 416 459 414 461 0.92

Sequence Information

Coding Sequence
ATGAGCGACGGAGAATCTGATATATCTCTCAGTGATGATGAAAACGATATTCAAGATTTGGAACAGTTGAATGCCGTTCTAAGCGAAGACGATGATTGTCCAAGCACTTCGGTTTCCCAGTATTCTGCAACAAGAAGTATATTTTCCGTTGATCAATCTGAACAGACATCAAAAATCGATGCCGCAATAGCTTTGAACAACATGTACGACGAGAAATTACGACGTCTCGAATCGATACTTAATAACCGACTTAAGGAGTGCCGGGAAAGATTAAAAGACATACCGTGCTCGACGGATGAAGCAGAAAACAAAGCAGAAATCTTTTATTATGTCAGCTGCGGTAAACCGTACTTCAAGGACTCAACAAACTTTCCAGCCCCAGACAATGATGATACAATCCTTATGAACAAATCCGAAATGTACGACTTCTCAACTGTATCTTCAGTTATCAGCTGGACCGTAAAAGATAAAAGTAATTTTTTGAACTTGCTCCATAAAATGTCCATGGAAATACGTAAGAAGGAACTACAATCAAACATCTCGGATTTAAATCGCCAGTTGAAGAGTAGCACTAAGAAGAAAGACATACAAAAGAAAATTAGCAGCCTGAACTTACAAATAACTAAAGTAAACAATATGTCTCTCAAGGAATTAGCTCTGCCTATCAACAAAGATTATGATTGGTTAGCCATAGCTAATACGTTAAAAAATAGACACACAGCAGGTGAATATCAGTCCCTCTGGCAATTATTTCTCCATCCCTCCATTAACAAGAAACCTTGGAGTAAAACTGAGCATACTGTTCTACAGAAGATTTGTTACGAGGAAGACTTGCAGGACTGGGATAAAATAGCAAAGAGGTTAAATACAGGGCGCACAAACTATCAGTGCTTTGTTTACTTCAGAACAAATATGAGTAACACATTCACTGGCAGAAAATGGAGCCCCGAGGAAATTGAGTATCTCAAAAGACTTATTGATTATTACAAGGAGGATAATTACATTCCATGGGGAAAAGTGGCCACATCAATGGAGAACAGGACAAAGATACAAATATACAATAAGTATCGAAGCCTAATGCAGCAGAGGAAGGGCCGATTTTTACCTGAGGAAGATACAGTTATATTGACATGCGTAGAAAACTTTGGACCTGATTACCAAAAAATGACTCAGTATCTTCCAGGTCGTACGATCGGTCAATGCAGATTGAGGTATCAGGTTTTAAGAAAGACCCGAATTTCAAAAGTGTGGACAATAGATGAGGACAAACGTCTTATACAACTGATGGCCAATCAAGATTCCGCAATAAATTTTTCGAGTATCACCAAATACTTTCCTGGTAAAGACAGAATTAACATAAGAAGCAGATACATAACATTAACAAATTGGATGAAACGCTACCCAAACATAGACATTTCTAAAGCACCAAGACGGGGTGCCCGTAGATTGGGGCACGGTTCACAGGCCGATAATTTGAACAAAGCGATAGAGGAGCTAAAAAATCGTATACAGTCAGAGGTGAATGATGTCAAAAACAAAAAAGTTACCCCAGAGTCTCCACATGAGGTTTTAGATGATGCCATAGTAGCATATCTAGCCACTGAGCATGTGAACATAGAGGAGGCCAGGAAATTGGAGGAGTTCAGAAAACTAGATGAGAAAACATTGCAGGACAATAATTGTAAAGCTCTGCAAACTAGGAGCAACGTCAAATCAAATTTAAGAGACCTTAGAGCGATACTGACTCTTCTTAGAGTTAAGCTGAATAAAGATAGATACAAGAGAAGCGTACCGAAAAGATATAAGGGACTACTAGAGCCTGATCCAAATCTTATTGTGTCACAAGTAAAATCCTATTCTAAGAAGAGTCCTGAGATGACTGTTTGTTTTGATAACATACCCGATATTTGGGGTACACAGAGATTGGGTCCTCTGGAATATGTACTTCCAGCAAATTATTCCACTGTTACGGGTTGTAAGAAGCTCCTGTCGTATGTATCTGAGAAGCCCACAAATGATGAGGTTATGAACATTAAGATTTTGTCGAGAAAAAATCTTTTTTTGAAGGAGCAATTATTTCTACTCATGGAAAGGTTTAATGTTCTCTTTTTGTGGCCAATGCTTCTATCCAATGCTCCCCCTGACCAATCTCTTACAGAACAAGCCAGTAATGAAGATGAAGAAGAATTATTTTGA
Protein Sequence
MSDGESDISLSDDENDIQDLEQLNAVLSEDDDCPSTSVSQYSATRSIFSVDQSEQTSKIDAAIALNNMYDEKLRRLESILNNRLKECRERLKDIPCSTDEAENKAEIFYYVSCGKPYFKDSTNFPAPDNDDTILMNKSEMYDFSTVSSVISWTVKDKSNFLNLLHKMSMEIRKKELQSNISDLNRQLKSSTKKKDIQKKISSLNLQITKVNNMSLKELALPINKDYDWLAIANTLKNRHTAGEYQSLWQLFLHPSINKKPWSKTEHTVLQKICYEEDLQDWDKIAKRLNTGRTNYQCFVYFRTNMSNTFTGRKWSPEEIEYLKRLIDYYKEDNYIPWGKVATSMENRTKIQIYNKYRSLMQQRKGRFLPEEDTVILTCVENFGPDYQKMTQYLPGRTIGQCRLRYQVLRKTRISKVWTIDEDKRLIQLMANQDSAINFSSITKYFPGKDRINIRSRYITLTNWMKRYPNIDISKAPRRGARRLGHGSQADNLNKAIEELKNRIQSEVNDVKNKKVTPESPHEVLDDAIVAYLATEHVNIEEARKLEEFRKLDEKTLQDNNCKALQTRSNVKSNLRDLRAILTLLRVKLNKDRYKRSVPKRYKGLLEPDPNLIVSQVKSYSKKSPEMTVCFDNIPDIWGTQRLGPLEYVLPANYSTVTGCKKLLSYVSEKPTNDEVMNIKILSRKNLFLKEQLFLLMERFNVLFLWPMLLSNAPPDQSLTEQASNEDEEELF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00744581;
90% Identity
iTF_00933700;
80% Identity
-