Basic Information

Insect: Lysandra bellargus
Gene Symbol: -
Assembly: GCA_905333045.1
Location: HG995355.1:4322589-4328890[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.3e-07 0.00018 21.8 0.0 4 37 16 49 13 56 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.3e-07	0.00018	21.8	0.0	4	37	16	49	13	56	0.85

Sequence Information

Coding Sequence: ATGGCGCCAACTGGGAAAAAACCTCGAGGCCAGTGGTCAGAATGTCAGCTAAAAAATGCCATAAAAGCAGTAAAGAGACGTGAAATGTCACAAAGAGCAGCTGCTGAAGCATTTTGTATCCCAAGGCGTACATTACGAAACCACTTAATATCCGGAAAAACAGAAAAGGTAACTGGTAGACCACCTATTCTGAATAAAAATCATGAACAGGACTTAGCAAAACGGATAATAAGACTTGCTCACGTAGGTATGCCGCTGACCCCCAAACTTGTTCGGAAACAGGCGTACGAGTTCTGTAGAGCAAATGGCATATCAAACATGTTCAGTGAAAAAACAAATATTGCAGGGAAGAAATGGCTGAAAGGTTTCCTCAAACGCTACTCGGAGATATCACTTCGTAAAGCTCAGTTTATGAATCCCGGCAGAGCACAAAAACTTAATAAGCACATCGTTAAAAAACACTTTGAAACTGTCAAAAAAATATATAACGAATTGGATATATCAAATCATCCAGAACGTCTATATAATATGGATGAGAAGGGTTGTAGATTGAACCTTCATCATCAGCAGAAAGTTTTTGCTGAAAAAGGTACAAAAAGAGTACATTTTATAGCTAATGAACATGCAGAAAATGTGACAATCGCGATGTGTGTGAATGCAACGGGAAATGCAGTGCCTCCAATGATCTTATTCAAGGGCAAAAGATTAAAACCAGAATTTTGTGACAATTTTCCTGCTGGAACCTTAGTGAGGATGGCACCCAAGGGAAGTATGACGACCGAACTTTTCGTGGACTTCATCGAACATCTGGGTCAGTATAAGTCTCCAGGAAAATGTTTATTAATTTTTGATGGCGCTTCTTGTCATTTGGATAACAGGATCGTAGATGCAGCAGATGAACACGACATCGTATTATACTGTTTGCCCTCAAACACAACGCACGAGTTACAACCCCTTGATAAGTCAGTTAATAAATCGTACGAGCATCATTGGGATGAGGAGCTATTATTATACGCATATCAATATCCAGATCGCAAACTGACAAAACAGCGCTTCAGTAAGATTTTTACCAAAGTATTGCCCAGGTGCATGACCCAAGAAAATATAATTAACGGGTTCAGAGCCACCGGTCTCTACCCTTATGATCCCAATGCAATTCCTCAAGAAGCTTACGCGCCTTCAGCGCTTACGCAATTACCTGGTATACAGCTTCAAAACGACTCTCAAATGCAACAAGCTACTGATTTCGGAGATTTAGTTGTTTCCCCACGACGAGACAATAACTTTGAGATAGATCATGTCACATACAATGAAGATAACTTGCGAGATATGTCACCATCCATTTTATCCCAGCTTCAAGATGATCTCTCAGAAAATGAACTTGCAGAAATAAATATATTAGATATTCCTAAGTGTTCAACTAGTACTCGTGGAAAGTTAGTTGACTATAGTTCCTCGTCCGAATCTACCATTGAGGATTCTCAACATCAAGAACAGCATCGTAGACAGCCCCTTTTGAGCATTCCGTACGACAGGAATTCTCAGTTTTTTTCATCTACTCCTTCCACCTCCGGTATAAATATGCACCCTCAACGACTGTTAGATTTTTCTACGTCAGACGAGTCCGATCAAGAAGATTTTGATCGAAATATATTAAATTTCACCCATGCACAATATCCTGCAAGAAATATTAACATTTATACGTCGTCATCTGAGTCGGAAGAAGAAAATATCAACCCACAGTCTAGAGAAAAATACAGTTCATTAGCTACACATGATCGGGAAAGATCTGAGGATTCTGATGATAATTTACCACTTTCTAAAATTAAAGAAACTCCAGGCACTTCAGGCGCTAAGACACCATTTCAAAAACAAATTCCCACGCCAAATTTCGCAACAGTAAAGAATAAACCAAGGCGTAAAGCTTTAAATTATATCGGTCAAAAAGTTACCAAAGACTTATTTGACGCTGCCATAGAAAAAGGGAAAAAGAAAAAACCAAAGTGTTATATATCGCTCGCCTCAACGGTGGACCACAAACAGTACTTGCAGAGTAAGAACTATAAAGGTGTGGAGAGACCGATTTTTAAAGACAATGACCCAGTGTGGGTGATTAAAAATGCAAATGCAAAAAGGATATGTTGGGTAGAGGGCATAGTTTTAAATAAAATAGGAAATGTTATATATAAAATTTTTGTACCGTGCTGGGAGGCCGAGATCACCAGACATGTGGATCATATTAGACCGAGACGGTTGGGTGACAATAATCTCACTTCGAGTGGCAATCGCTGGGATTTAGACTTGGTGCCGGATGTGGCGCCTGACTCTCGCTACGCAGCGCCGTCCGACACAGGAATGGCCTCCGACTCAGAGGGGGGAGAGGAACTGGAGAGTCCGAGGTCGTCTGAACGAGTTTTTAGCGATAATGTCGGCGGCCGGCGACGTGAAATAAGTCCCGTGTTTTCCACACCACCGTCACGGTCTCGAGATTAG
Protein Sequence: MAPTGKKPRGQWSECQLKNAIKAVKRREMSQRAAAEAFCIPRRTLRNHLISGKTEKVTGRPPILNKNHEQDLAKRIIRLAHVGMPLTPKLVRKQAYEFCRANGISNMFSEKTNIAGKKWLKGFLKRYSEISLRKAQFMNPGRAQKLNKHIVKKHFETVKKIYNELDISNHPERLYNMDEKGCRLNLHHQQKVFAEKGTKRVHFIANEHAENVTIAMCVNATGNAVPPMILFKGKRLKPEFCDNFPAGTLVRMAPKGSMTTELFVDFIEHLGQYKSPGKCLLIFDGASCHLDNRIVDAADEHDIVLYCLPSNTTHELQPLDKSVNKSYEHHWDEELLLYAYQYPDRKLTKQRFSKIFTKVLPRCMTQENIINGFRATGLYPYDPNAIPQEAYAPSALTQLPGIQLQNDSQMQQATDFGDLVVSPRRDNNFEIDHVTYNEDNLRDMSPSILSQLQDDLSENELAEINILDIPKCSTSTRGKLVDYSSSSESTIEDSQHQEQHRRQPLLSIPYDRNSQFFSSTPSTSGINMHPQRLLDFSTSDESDQEDFDRNILNFTHAQYPARNINIYTSSSESEEENINPQSREKYSSLATHDRERSEDSDDNLPLSKIKETPGTSGAKTPFQKQIPTPNFATVKNKPRRKALNYIGQKVTKDLFDAAIEKGKKKKPKCYISLASTVDHKQYLQSKNYKGVERPIFKDNDPVWVIKNANAKRICWVEGIVLNKIGNVIYKIFVPCWEAEITRHVDHIRPRRLGDNNLTSSGNRWDLDLVPDVAPDSRYAAPSDTGMASDSEGGEELESPRSSERVFSDNVGGRRREISPVFSTPPSRSRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01248068; iTF_01248069; iTF_01525960; iTF_01525961; iTF_01538685; iTF_00301118; iTF_01491816; iTF_00445098; iTF_00445099; iTF_00445100; iTF_00445101; iTF_00445102; iTF_00445103; iTF_00445104; iTF_00445105; iTF_00445106; iTF_00445107; iTF_00445108; iTF_00445109; iTF_00445110; iTF_00445111; iTF_00445112; iTF_00934700;
90% Identity: iTF_00445098;
80% Identity: -