Dbru001221.1
Basic Information
- Insect
- Diarsia brunnea
- Gene Symbol
- -
- Assembly
- GCA_949774965.1
- Location
- OX458996.1:17840140-17842401[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-07 0.00021 22.0 0.0 4 37 16 49 13 56 0.85
Sequence Information
- Coding Sequence
- ATGGCGCCAACTGGGAAAAAACCTCGAGGCCAGTGGTCAGAATGTCAGCTAAAAAATGCCATAAAGGCAGTAAAGAGACGTGAAATGTCACAACGAGCAGCTGCTGAAGCATTTTGTATCCCAAGGCGTACATTGCGAAACCACTTAATATCCGGAAAAACAGAAAAGGTAACTGGTAGACCACCTattctgaataaaaaacatgaacaGGACTTAGCAAAACGGATAATAAGACTTGCTCACGTAGGTATGCCGCTGACCCCCAAACTTGTTCGGAAACAAGCGTACGAGTTCTGTAGAGCAAATGGCATATCAAACATGttcagtgaaaaaacaaatattgcagGGAAGAAATGGCTGAAAGGTTTCCTCAAACGCAATTCGGAGATATCACTTCGTAAAGCTCAGTTTATGAATCCCGGCAGAGCACAAAAACTTAATAAGCACATCGTTCAAAAACACTTTGAAgctgtcaaaaaaatatatagcgagTTGGATATATCAAATCATCCAGAACGTCTATATAATATGGATGAGAAGGGTTGTAGATTGAACCTTCATCATCAGCAGAAAGTTTTTGCTGAAAAAGGTTCAAAAAGAGTGCATTTTATAGCTAATGAACATGCAGAAAATGTGACAATCGCGATGTGTGTGAATGCAACGGGAAATGCAGTGCCTCCAATGATCTTATTCAAGGGCAAAAGATTAAAACCAGAATTTTGtgacaattttcctgctggaagcTTAGTAAAGATGGCACCCAAGGGAAGTATGACGACCGAACTTTTCGTGGACTTCATCGAACATCTGGGTCAGTATAAGTCTCCAGGAAAATgcttattaatttttgatggcGCTTCTTGTCATTTGGATGCCAGGATCGTAGATGCAGCAGATGAACACGACATCATATTATACTGTTTGCCCTCAAACACAACGCACGAGTTACAACCCCTTGATAAGTCAGTTAATAAATCGTACGAGCATCATTGGGATGAGGAGCTATTATTGTACGCATATCAATATCCAGATCGCAAACTTACAAAACAGCGCTTCAGTAAGATTTTTACCAAAGTATGGCCCAGGTGCATGAcccaagaaaatataattaacggATTCAGAGCCACCGGACTCTACCCTTATGATCCCAATGCAATTCCTCAAGAAGCTTACGCGCCTTCAGCGCTTACACAATTACCTGGTATACAACATCAAAACGACTCTCAAATGCAACAAGCTACTGATTTCGGAGATTTAGTGGTCTCCCCACGACGACACAATAACTTTGAGATAGATCATGTCACATACAATGAAGATAACTTGCGAGATTTGTCACCATCGATTTTATCCCAGTTTCAAGATGATCTCCCAGAAAATGAACTTGCAGAAAGAAATATATTAGATATTCCAAAGTGTTCAACTACTACTCGTGGAAAGTTAGTTGACTATAGTTCCTCGTCCGAATCTACCATTGAGGATTCTCAACATCAAGAACAGCATCGTAGACAGCCCCTTTTGAGCATTCCGTACGACAGGAATTCTCAGTTTTTATCACCTATTCCTTCCACCTCCGGTATAAATAGTATGCACCCTCAACGACTGTTAGATTTTTCTACGTCAGACGTGTCCGATCAAGAAGATTTTGatcaaaatatattgaatttcACCCATGCACAATATCCTGgaagaaatattaacatttatacGTCGTCATCTGAGTCGGAAGAAGAAAATATCAACCCACAGTCGAGAGAAAAATACAGTTCATTTGCTAAACGTGATCAGGAAAGATCTGAGGATTCTGATGATAACGTAccactttctaaaattaaagaaacttcAGGCACTTCAGGCGCTAAGACACCATTTCATAAACAAATTCCTACGCCAAATTTCGCAACAATAAAGAATAAACCAAGGCGTAAAGCTTTAAATTATATCGGGCAAAAGGTTACCAAAGACTTATTTGACGCTGCCAAagaaaaaggcttacaaaaacaaaagaaaaaatcaattCCTGTAAAAGGacagctaaaacaaaaaaaaacgaacggtaaatctacagaaaaaaaaaatgctaaaaaacagaaaaaagtggagACTGAAACTGCTGAAAATGAAGTGTGGTTTTGTCAAGCTTGTGAGATGGACAGGGTTGCCGATATGCGTCAATGTAAAGTGTGTTTGGCGTGGTACCATGAGGATTGCGTAGGTTTGACAAAAGAAGACACCGATATTTTCTTATGCCCAATGTGTAACTAA
- Protein Sequence
- MAPTGKKPRGQWSECQLKNAIKAVKRREMSQRAAAEAFCIPRRTLRNHLISGKTEKVTGRPPILNKKHEQDLAKRIIRLAHVGMPLTPKLVRKQAYEFCRANGISNMFSEKTNIAGKKWLKGFLKRNSEISLRKAQFMNPGRAQKLNKHIVQKHFEAVKKIYSELDISNHPERLYNMDEKGCRLNLHHQQKVFAEKGSKRVHFIANEHAENVTIAMCVNATGNAVPPMILFKGKRLKPEFCDNFPAGSLVKMAPKGSMTTELFVDFIEHLGQYKSPGKCLLIFDGASCHLDARIVDAADEHDIILYCLPSNTTHELQPLDKSVNKSYEHHWDEELLLYAYQYPDRKLTKQRFSKIFTKVWPRCMTQENIINGFRATGLYPYDPNAIPQEAYAPSALTQLPGIQHQNDSQMQQATDFGDLVVSPRRHNNFEIDHVTYNEDNLRDLSPSILSQFQDDLPENELAERNILDIPKCSTTTRGKLVDYSSSSESTIEDSQHQEQHRRQPLLSIPYDRNSQFLSPIPSTSGINSMHPQRLLDFSTSDVSDQEDFDQNILNFTHAQYPGRNINIYTSSSESEEENINPQSREKYSSFAKRDQERSEDSDDNVPLSKIKETSGTSGAKTPFHKQIPTPNFATIKNKPRRKALNYIGQKVTKDLFDAAKEKGLQKQKKKSIPVKGQLKQKKTNGKSTEKKNAKKQKKVETETAENEVWFCQACEMDRVADMRQCKVCLAWYHEDCVGLTKEDTDIFLCPMCN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00933692;
- 90% Identity
- iTF_00445098;
- 80% Identity
- iTF_00445100; iTF_00445101; iTF_00445102; iTF_00445103; iTF_00445104; iTF_00445105; iTF_00445106; iTF_00445107; iTF_00445108; iTF_00445109; iTF_00445110; iTF_00445111;