Ldis008800.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lymantria dispar
Gene Symbol
e2f7
Assembly
GCA_032191425.1
Location
CM063445.1:13236792-13239052[+]

Transcription Factor Domain

TF Family
E2F
Domain
E2F_TDP domain
PFAM
PF02319
TF Group
Helix-turn-helix
Description
This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6e-22 1.6e-18 67.6 0.0 1 65 54 120 54 120 0.91
2 3 2.3 2.3e+04 -3.4 0.0 11 29 126 143 125 144 0.69
3 3 5.4e-17 5.3e-13 49.9 0.1 1 64 155 245 155 246 0.90

Sequence Information

Coding Sequence
ATGATGTATGAAGATGACAACATAACTTGCACTCCGAAGCGCTGTGTGCTTACTGAAGTTACAAATTCAACCAATTATGTGTCACCAACCGCTAACCTCAAGTTATTGACTAATGTCGCGTTGCAATATCCTACTCCACCACCGAGTGCTGTCCACCGAAAAGAAAAATCTCTACAAATATTATGTGATAGATTCCTCAATTTGTACCCTCTTCATAGAGATGGACCAATGGAAATACAACTGGATAGCACTGCAGCCCGGTTAGGTGTGGAAAAACGCCGAATGTATGACATAATCAACATACTTGAAGCTATGCAATGTGCAGTACATAAAAGAAAAAACACATATCTTTGGCATGGAGGCTCACGACTGAATTCTTTCCTTAAAATGCTTAAGAAACAGGGAGAACACCTTAGGCTTTCTGAAGCACTGCGTGGAAAGGCACCAAAACCTCCTACACCAAAACATAAAACCCTGGGTGTATTAGCACAGAGATTTCTAATGTTATTCTTAGTGGAACCTCCAAATACTCTAATAAACTTGGAAATGGCTGTGAGAGTGTTAATTGACAcatctattaaaattaaaacagtgATCTCACCTGAGCAGCAAGATCGCCAGCACAAATCTAAAGTTAGGCGACTCTATGACATTGCCAATGTATTTATTTCAATTGGTCTCATTGAAAAAGTATCaggtaatttaatattaaagaagCCAGTTTTTAAATATGTGGGACCGCAAGACCGTAAGATGAAGAAGAGTGATAAGTTAACAGTGACCACTCTATCACCTCTAACTCCACTTTCGATGCTTGATAGTCAGCAACGGATTCCTGCTTGTCATGTGTTCGCCGGAAAGTCTAAACGGAAACTAGAGTTCACAACTCCAACGACCACTAAAGAGTTGGAACTTGTCATCACAACCCCACCTCATACACCGTCGCACAAATGGGATGAAATCTTGCATGTAGCCGACATGGAACTGACTAGAATTAACAATGGAGTACACTtgtga
Protein Sequence
MMYEDDNITCTPKRCVLTEVTNSTNYVSPTANLKLLTNVALQYPTPPPSAVHRKEKSLQILCDRFLNLYPLHRDGPMEIQLDSTAARLGVEKRRMYDIINILEAMQCAVHKRKNTYLWHGGSRLNSFLKMLKKQGEHLRLSEALRGKAPKPPTPKHKTLGVLAQRFLMLFLVEPPNTLINLEMAVRVLIDTSIKIKTVISPEQQDRQHKSKVRRLYDIANVFISIGLIEKVSGNLILKKPVFKYVGPQDRKMKKSDKLTVTTLSPLTPLSMLDSQQRIPACHVFAGKSKRKLEFTTPTTTKELELVITTPPHTPSHKWDEILHVADMELTRINNGVHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00967840;
90% Identity
iTF_00823716; iTF_01360399; iTF_01221284; iTF_00185929; iTF_00185100; iTF_01487505; iTF_01025765; iTF_00888005; iTF_01030923; iTF_01029007; iTF_01027089; iTF_01028051; iTF_01029947; iTF_00037566; iTF_01338277; iTF_01339748; iTF_00237256; iTF_00425163; iTF_01377261; iTF_00017134; iTF_00783216; iTF_00785808; iTF_00784186; iTF_00784991; iTF_00072050; iTF_01532818; iTF_00677332; iTF_00038486; iTF_00171548; iTF_00036413; iTF_01533726; iTF_00888982; iTF_01285335; iTF_01361372; iTF_01362884; iTF_00274238; iTF_00928448; iTF_00967840; iTF_00932209; iTF_01179294; iTF_00621811; iTF_01073397; iTF_01180118; iTF_01424836; iTF_00172519; iTF_00041569; iTF_00071201; iTF_00121185; iTF_00122145; iTF_00176897; iTF_00301890; iTF_01094690; iTF_00299939; iTF_00373699; iTF_00444899; iTF_00123140; iTF_00685220; iTF_01093828; iTF_00973511; iTF_01061671; iTF_01084039; iTF_00043272; iTF_00448808; iTF_01064424; iTF_00745417; iTF_00622602; iTF_00667146; iTF_00757930; iTF_01531754; iTF_00445899; iTF_00830955; iTF_01440779; iTF_00850383; iTF_00952495; iTF_01062544; iTF_01063539; iTF_00711604; iTF_00851508; iTF_00907668; iTF_00042422; iTF_01526807; iTF_01092856; iTF_01525720; iTF_00124026; iTF_00446906; iTF_00726075; iTF_00808893; iTF_01192413; iTF_00300959; iTF_00951583; iTF_01084927; iTF_00039584; iTF_00906848; iTF_00040584; iTF_01173064; iTF_00905902; iTF_00771665; iTF_01439684; iTF_01119069; iTF_00111390; iTF_01118048; iTF_00147090; iTF_00374963; iTF_00809848; iTF_01342009; iTF_00120279; iTF_00273401; iTF_01246618; iTF_01230300; iTF_01116960;
80% Identity
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