Basic Information

Insect: Lydus trimaculatus
Gene Symbol: su(Hw)
Assembly: GCA_037414755.1
Location: JAZBGY010000151.1:67351-71870[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0042 0.24 11.6 2.4 1 23 181 204 181 204 0.94

2 13 0.0015 0.083 13.1 0.6 1 23 235 258 235 258 0.96

3 13 1.1e-06 6e-05 23.0 1.7 1 23 264 286 264 286 0.99

4 13 2.2e-05 0.0012 18.8 0.4 2 20 293 311 292 313 0.95

5 13 1.8e-05 0.001 19.1 1.6 1 23 324 346 324 346 0.95

6 13 2.3e-05 0.0013 18.8 1.3 1 23 356 378 356 378 0.99

7 13 6.7e-06 0.00038 20.4 0.3 1 23 384 406 384 406 0.98

8 13 1.6e-06 8.7e-05 22.4 0.7 1 23 412 434 412 434 0.99

9 13 9.9e-06 0.00056 19.9 3.5 1 23 440 462 440 462 0.95

10 13 4.8e-05 0.0027 17.8 3.4 1 23 468 491 468 491 0.97

11 13 0.0002 0.011 15.8 2.7 2 20 498 516 497 519 0.93

12 13 6.7e-06 0.00038 20.4 0.5 1 23 525 547 525 547 0.97

13 13 2.1e-05 0.0012 18.9 3.3 2 23 554 576 553 576 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0042	0.24	11.6	2.4	1	23	181	204	181	204	0.94
2	13	0.0015	0.083	13.1	0.6	1	23	235	258	235	258	0.96
3	13	1.1e-06	6e-05	23.0	1.7	1	23	264	286	264	286	0.99
4	13	2.2e-05	0.0012	18.8	0.4	2	20	293	311	292	313	0.95
5	13	1.8e-05	0.001	19.1	1.6	1	23	324	346	324	346	0.95
6	13	2.3e-05	0.0013	18.8	1.3	1	23	356	378	356	378	0.99
7	13	6.7e-06	0.00038	20.4	0.3	1	23	384	406	384	406	0.98
8	13	1.6e-06	8.7e-05	22.4	0.7	1	23	412	434	412	434	0.99
9	13	9.9e-06	0.00056	19.9	3.5	1	23	440	462	440	462	0.95
10	13	4.8e-05	0.0027	17.8	3.4	1	23	468	491	468	491	0.97
11	13	0.0002	0.011	15.8	2.7	2	20	498	516	497	519	0.93
12	13	6.7e-06	0.00038	20.4	0.5	1	23	525	547	525	547	0.97
13	13	2.1e-05	0.0012	18.9	3.3	2	23	554	576	553	576	0.94

Sequence Information

Coding Sequence: ATGGAGGAGTCTGTTGATATTAAATCGGAAATCACTGATGATACAAAAGATGATGAGACGGTGGTGTTGCAAAATATACCAATGGAAGGTGAGGATATACCTGTAATATTTAGTGATTATATGGAGAATAATTCTGATGGTAATCTACAAATAAATAGTGTACAAGATGATGTGATTCATACATATATTATCGAcattaatgttgattatagTGGCATACAGTATGATGAAACAGCAACCGAACCCCAACAAGACAAAGAACAAAACCCTAGTGAAACAAtcgaaaataatcaacaagaacaatctgtaacaactaataataataataatgatgatgatgatacaatggaatttgatgaatatgttgaagaaacaacaacacattcaacaataatattagaCCAAaccaatgatgatgatgatggtggtgaagaagaggaagaagaagaagatggtCCAAcacaagatgatgatgatgatgatgaagatgatgctGTTAATTCACAAGATACAGAAGAGGAGGATGAAGATGAAGGTGTACATGAGTGTGATTTATGTTTGcgtaaatttaaaacaacagcCGGTTTAAAACGGCATAAAACTGTAAATCATGCTGATGATGAAGTACAAGAGGATCCATTAAGTTTTGAATTGTGTGTATGTTGTGGGGAACCATTAGATTCAGCGCATACtaCTGGCGAATTTAAATGTTCTAAATGCGATAAATTATTCGTTGCACAATTAAATCTAGATCGACATTATAGTATTGAACAttgtgaaaataataattttaaatgtgttGAATgtaaaaaagaatttaaacaGAAAGAACAATTATTGGAACATATGAAAATGCATCCATTAAcgaaaaatgttaaatgtCCAGGATGTAGTCGTGAATTTACTAGAAAATACCATTTAGATCGTCATATTGCACAAACTGGATGTAATGGTGCACCACGACGACAATTTTTATGTCGagtTTGCAATCGAGTATTCCATCGTAAAGATAATTTAGCTGATCATTTACGTGTCCATGCTGGTCAAGCTAAAAAGAAGAAGACATTCACATGCgaatattgtaataaagagTTTCATGGTTCAGCTTTATTGAATATTCATGTTAGAACGCATACGGGTGAACGTCCATATGCTTGTGATTTGTGTCCGAAAAGGTTCCCATCTAGTGGTGCTATGAAAAAACATCGACGTATGCATACAGGAGAAAGACCATATGTTTGTAAAGagtgTGATAATCGATTTGCGGCtaaagaaacattaaatcGTCATATGCGTACACATACAGGTGAAAAACCACATTCATGTCAATTTTGTGGTAAATCATTTATACAAGCATCACAATTACGTGCTCATATATTCCATCATACTGGCGAGAATGCTTATACATGTCCACATTGTAATCGTGCATTTAATCGTAAATTACGTTTAACAACACATATTAAATATATGCATGAAGGTGCTGAACCAATGTCCTGTTCTGAATGTGATAAAACATTCTTTAGAAAAGAAGATTTAGCCCGACATTATCTTTGTCATACTGGCGAAAGACcGTTTGCTTGTGATGTCTGTCAGAAGACATTTGCTGTAAAATCATCAttgaaaattcataaattaacACATCGTAAAGAGCCACCATGTAGTTGTGATACATGTGGTCGTGCATTTATACGTCAAGATTGTTTAATGCGTCATATACGTGCCCGTCATCGTGATGTATTAGAAGATATAATGGCAAGTGCTGAAAAGAAacgtttacaacaacaattattaaatgctGCTACAGAAGCAGCATCAAAAAATCCAAATAGTTTTACAGAAAATATGGTATGGAATGAATTGACATTAACTGAATcgataaaagaattattaacaatattggtTGAGGAATCATGTTTGAAAGATTTTGGTTTCCCAGATGCACcagttgataaaattttagatgCTGTCATAAAAAAATGCGGACATAAACCAGCATCTGAAGatgattttgattatattggACGTATGAGAGAgaatgcaaaattattatttactgttgttattgatgatgatgctgttaaatcattattaaataatcaaactgTTGATGAAGTGATTGTGCATGTTTTAAGGTTGGCTAAAGcagaaaataaataa
Protein Sequence: MEESVDIKSEITDDTKDDETVVLQNIPMEGEDIPVIFSDYMENNSDGNLQINSVQDDVIHTYIIDINVDYSGIQYDETATEPQQDKEQNPSETIENNQQEQSVTTNNNNNDDDDTMEFDEYVEETTTHSTIILDQTNDDDDGGEEEEEEEDGPTQDDDDDDEDDAVNSQDTEEEDEDEGVHECDLCLRKFKTTAGLKRHKTVNHADDEVQEDPLSFELCVCCGEPLDSAHTTGEFKCSKCDKLFVAQLNLDRHYSIEHCENNNFKCVECKKEFKQKEQLLEHMKMHPLTKNVKCPGCSREFTRKYHLDRHIAQTGCNGAPRRQFLCRVCNRVFHRKDNLADHLRVHAGQAKKKKTFTCEYCNKEFHGSALLNIHVRTHTGERPYACDLCPKRFPSSGAMKKHRRMHTGERPYVCKECDNRFAAKETLNRHMRTHTGEKPHSCQFCGKSFIQASQLRAHIFHHTGENAYTCPHCNRAFNRKLRLTTHIKYMHEGAEPMSCSECDKTFFRKEDLARHYLCHTGERPFACDVCQKTFAVKSSLKIHKLTHRKEPPCSCDTCGRAFIRQDCLMRHIRARHRDVLEDIMASAEKKRLQQQLLNAATEAASKNPNSFTENMVWNELTLTESIKELLTILVEESCLKDFGFPDAPVDKILDAVIKKCGHKPASEDDFDYIGRMRENAKLLFTVVIDDDAVKSLLNNQTVDEVIVHVLRLAKAENK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01022405; iTF_00987307; iTF_01366510; iTF_00813874; iTF_01566428; iTF_00814560;
90% Identity: -
80% Identity: -