Basic Information

Insect: Hycleus phaleratus
Gene Symbol: -
Assembly: GCA_013841185.1
Location: JACDRP010000349.1:65595-68433[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0022 0.14 12.1 0.5 1 23 165 188 165 188 0.95

2 13 0.00079 0.053 13.5 0.4 1 23 219 242 219 242 0.96

3 13 5.7e-06 0.00038 20.2 0.7 1 23 248 270 248 270 0.99

4 13 1.3e-05 0.00084 19.2 0.4 2 20 277 295 276 297 0.95

5 13 1e-05 0.00069 19.4 1.6 1 23 308 330 308 330 0.95

6 13 1.3e-05 0.00086 19.1 1.5 1 23 340 362 340 362 0.99

7 13 2.4e-06 0.00016 21.4 0.3 1 23 368 390 368 390 0.98

8 13 8.9e-07 5.9e-05 22.8 0.7 1 23 396 418 396 418 0.99

9 13 5.7e-06 0.00038 20.3 3.5 1 23 424 446 424 446 0.95

10 13 2.7e-05 0.0018 18.1 3.4 1 23 452 475 452 475 0.97

11 13 0.00011 0.0075 16.2 2.7 2 20 482 500 481 503 0.93

12 13 2.1e-06 0.00014 21.6 0.5 1 23 509 531 509 531 0.97

13 13 1.2e-05 0.00079 19.3 3.3 2 23 538 560 537 560 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0022	0.14	12.1	0.5	1	23	165	188	165	188	0.95
2	13	0.00079	0.053	13.5	0.4	1	23	219	242	219	242	0.96
3	13	5.7e-06	0.00038	20.2	0.7	1	23	248	270	248	270	0.99
4	13	1.3e-05	0.00084	19.2	0.4	2	20	277	295	276	297	0.95
5	13	1e-05	0.00069	19.4	1.6	1	23	308	330	308	330	0.95
6	13	1.3e-05	0.00086	19.1	1.5	1	23	340	362	340	362	0.99
7	13	2.4e-06	0.00016	21.4	0.3	1	23	368	390	368	390	0.98
8	13	8.9e-07	5.9e-05	22.8	0.7	1	23	396	418	396	418	0.99
9	13	5.7e-06	0.00038	20.3	3.5	1	23	424	446	424	446	0.95
10	13	2.7e-05	0.0018	18.1	3.4	1	23	452	475	452	475	0.97
11	13	0.00011	0.0075	16.2	2.7	2	20	482	500	481	503	0.93
12	13	2.1e-06	0.00014	21.6	0.5	1	23	509	531	509	531	0.97
13	13	1.2e-05	0.00079	19.3	3.3	2	23	538	560	537	560	0.94

Sequence Information

Coding Sequence: ATGGAGGAGGCAATTAGCATTAAAGATGAGATTATTGAAGACAGTAAGGATGCTGTTGTTCTACAAAATATGCCAATGGAAGGTGACGATATTCCTGTAATATTCAGCGATTATATGGAGAATAATTCGGATGGGAATTTACAAATTAATAGCGTACAAGATGATGTTATACACACCTATATTATTGATGAGATACAATATGATGAAACACCATCTGAATCGCATCAGGATAAAGACCAGAATGAGACTATCGAAATTAATCGAGTTGATCAAGACGAACAAGACCAATCTAGATCGAATAATGATAACGAAACGATGGAATTGGAAGAGTACGATGATGAAACCTCCCATATTGTATTGTTAGAAAATGGTAGTAGAGATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTAAATTCACAAGATACAGAAGATGATGATTATGAAGGTTTATATGAGTGTGATCTATGTTTGGGTAAATTTAAAACATCAGCCGGTTTAAAACGGCACAAAACTGTAAATCACGCCGAAGCGGAAATTCAAGAGGATCCATTAAGTTTTGAATTGTGTGCATGTTGTGGGGAACCTTTAGATTCAGCACATATGAGTGGTGATTTTAAATGTACAAAATGCGATAAATTATTCGTGGCACAATTAAATTTGGATCGACATGTTAGTATTGAACATTCGGAGAATGATTATTATAAATGTGTTGAATGTAAGAAAGAATTTAAAGAAAAAGAAGGATTACTTGAACATATGAAGATGCATCCGTTAACAAAGAATGTTAAATGTCCGGGATGTAGTCGAGAATTTACCCGAAAATATCATTTAGATCGTCATATTGCACAGACTGGTTGTAATGGGGCGCCGAGGAAACAATTCTTATGTCGAGTTTGTAATCGAGTTTTCCACCGGAAAGATAATTTAGCTGATCATTTACGTGTCCATGCTGGTCAAGTTAAGAAGAAAAAGACATTTAGATGTGAATATTGTAATAAGGAATTTCACGGTTCAGCTTTATTGAATATTCATGTTAGAACACATACAGGTGAGCGTCCGTATCCTTGTGATTTGTGTCCGAAAAAATTCCCATCTAGTGGTGCTATGAAAAAACACCGACGTATGCATACTGGCGAGAGACCTTACGTTTGTAAAGAGTGTGATAATCGATTTGCAGCAAAGGAAACGTTAAATCGTCATATGCGTACACATACTGGTGAAAAGCCACATTCGTGTCAATTTTGTGGTAAATCATTTATTCAAGCTTCACAATTACGTGCCCATATATTCCATCATACTGGCGAGAATGCCTATACATGTCCGCATTGTAATCGTGCATTTAATCGTAAATTACGTTTAACAACTCATATTAAATATATGCACGAGGGTGCTGAACCAATGTCCTGTTCTGAATGCGATAAGACGTTCTTCAGGAAGGAAGATTTAGCCAGACATTATCTTTGTCATACTGGTGAAAGACCTTTTGCTTGCGATATTTGCCAGAAAACGTTTGCTGTAAAATCATCATTGAAAATACACAAATTAACCCACCGTAAAGAACCACCATGTAGTTGTGATACATGTGGTCGTGCTTTTATCCGTCAAGATTGTCTAATGCGTCATATACGTGCCCGTCATCCAACAATTATTGAATGCTGCAACAGAGGCAGCATCGAAAAATCCAAATAG
Protein Sequence: MEEAISIKDEIIEDSKDAVVLQNMPMEGDDIPVIFSDYMENNSDGNLQINSVQDDVIHTYIIDEIQYDETPSESHQDKDQNETIEINRVDQDEQDQSRSNNDNETMELEEYDDETSHIVLLENGSRDGXXXXXXXXXXXXXXXXXXXXXXVNSQDTEDDDYEGLYECDLCLGKFKTSAGLKRHKTVNHAEAEIQEDPLSFELCACCGEPLDSAHMSGDFKCTKCDKLFVAQLNLDRHVSIEHSENDYYKCVECKKEFKEKEGLLEHMKMHPLTKNVKCPGCSREFTRKYHLDRHIAQTGCNGAPRKQFLCRVCNRVFHRKDNLADHLRVHAGQVKKKKTFRCEYCNKEFHGSALLNIHVRTHTGERPYPCDLCPKKFPSSGAMKKHRRMHTGERPYVCKECDNRFAAKETLNRHMRTHTGEKPHSCQFCGKSFIQASQLRAHIFHHTGENAYTCPHCNRAFNRKLRLTTHIKYMHEGAEPMSCSECDKTFFRKEDLARHYLCHTGERPFACDICQKTFAVKSSLKIHKLTHRKEPPCSCDTCGRAFIRQDCLMRHIRARHPTIIECCNRGSIEKSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00929766;
90% Identity: iTF_00813874; iTF_01022405;
80% Identity: -