Lphl007654.1
Basic Information
- Insect
- Lycaena phlaeas
- Gene Symbol
- PAXBP1
- Assembly
- GCA_905333005.1
- Location
- HG995170.1:15909039-15922473[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0037 48 3.9 0.0 169 206 478 516 473 519 0.85 2 3 5.7e-19 7.5e-15 55.8 1.5 3 190 506 670 504 676 0.80 3 3 0.74 9.7e+03 -3.6 0.0 41 66 776 796 765 799 0.61
Sequence Information
- Coding Sequence
- ATGTCACTATTTCGTAAACCAAAAAAAATCCAAAGACGTGTTTTTTGTGCCGATGATGACGAAGATGGTGATCCGGAGCCTCCGCCGCCGCCAATTATTAGTCAAAATAGAAAAGAAAATAAACCGATAAAGAGTATACAGTTGCTAAGTTTTGCGGATGAAGAGGAAGATGGTGAGGTATTCAAAGTGAAAAAATCATCACAAAGTAAGAAGTTGGCAAAACGCAGGGAAAAAGAGAAACGTCGTATCCCCGAAAATGACTGTAACAGAGTAGACAATAATGAATATGAGGATATACCGGCAGAAGAGAAAGTTACAGAGAAACCCAAGAAAAAGGTTACTCTTGAAGGGTTGATTCTGTCCGGTCGTGAGGCACTAGCGGCTGATGGTACGGGCGATGTATCATCTGGGAGCGAGAACGAAGATAGTAGGGGTTTCCACCAGTATCGGGCTGAGTCGGTGCGAGCAGCACTCGCTGTGGCGCCCGGACACATACCCGACGCGGCGCTCATCCACGCGGCGCGCAAAACTCGACAGCAGGCTCGCGAGCTGGGAGACTATGTACCGATTAAAACAGAAAATGCGCCGGGATCACGCTTGACACGTGACGATGACATGGAGGATGACGATGATGATGAAGAGGATGGAAGGATAGAAGTGCGTGGCTTAGAATTACCGAGTGATAAGCCTAAACGTACCACTACAGCAACAGCTTCAGATGAGGAGATCAACAGTGAAGCTGAGGAGTGGGAGGAGCAACAGATGCAAAAGGCGGTGCCGGCCATGGCTGACATTACCGCCGTTCTGGACAACGGCGAGGTGAACCCATTCAGCGTGGTCCCGCCTCCGCCCCGCCCAGACGACGCGCCGCAGATGCGTGCGCTGCTTGCGCCCGGAAAAGCGCCGCCTGCGACCGCGCAGGAATTAGTTGATGCACTACGTGATAGGCTGTCGGAGCTAGAGGCGACGCGTGCGGCGGCGCTGGAGCGACGCGAACGATGTCGCGAGCGGCTGCTGGCGGCGGCGCGTGTGCGTGAGTCCCGTGCGGCGCGCGCGCGCCCCCTTGACGCCGCCTACCGCCGCGCGCAGGCCGTGCGCGGGTACCTCACCGACCTGGTGGAGTGCCTCGACGAAAAGATGCCTCAGCTAGAGGCGCTGGAGGCGCGCGCGTTAGCGCTGCACCGCCGCAGATGCGAGTTCCTCATCGAGCGGAGACGAGCCGACGTACGTGATCAAGCTCAAGACGTCCTGGCGCTTGCCGCCCGAAGCGGCGCAGCGCGGCCAGTTGAAAATGAGGAGAAAAGCCGACGCACGGCGGAGCGTGAGGGGCGGCGGCGCGCGCGGCGGCTGAGGCGGGAGGCGGCTGGCACCGCGCTCGCCCACCGCGACGGAGACTCCAGCGACGACGAGCCGCCGCCCGCTATCGCGCATGCGCACCGCGCCGCAGCAGAGGAGATCCGTCGCGAGGCGAGCGCGCTGTTCGCGGACGCGCTGCCGGCGTGGCGCAGCGTGCGCGGCGTGTGCGCGCGGCTCGCCCGCTGGCGGCGGCGCGCGGCCGCTCTCTACGCCGACGCCTACATCGCGCAGTGTCTGCCGCAGCTGCTCGCGCCCTACATCCGCCATCAGTTGATCCTGTGGAATCCACTTGCGGATGAAGACAATGAGGACTATGAGAAAATGGATTGGTACAAATGTCTAATGATGTACGGCGTCCGCTCGGAGAAGGTGTCGAGCGACTCGGAGCAGTCGGAGGAAGAGGAGGAGGCCGTCATCGTCACCGAGAGCTTGGTCCGCACCGACCTCGACCTGATGCTGGTGCCCACCATCATTGATAAGGTTGTGCTACCCAAGGTCACCGAGCTGGTGGAGCAGGCGTGGGACCCGATGAGCGTGCGCGCGTGCGTGCGGCTGCGGCAGCTGGTGGTGCGCGCCGCCGAGCTGCCGCGCGCGCCCGCCCTGCCGCGCCTGGCCGCCGCGGCGCACGCCCGCCTCGCGCACGCGCTCAACGCCGACGTCTTCCTGCCCGCGCTGCCGCCGCACGTGGTGGAGGGCGGCGGCGGGCTGTTCTGGCGGCGCTGCCTCGGCGGGGGCGTGCGGCTGCTGCGGGCCACGCTCGCCCTGTGCGCTCCGCCCCCCGCGCTGCGGGCTGACCCGCTCGCGCTCAAACTCATCGAAACGCTATGCTGCGCGGCGGGGGCGGCGCCCGGCCCGCAGATGGCGGCCGCAGCGGCGGCGCTGACGGACACGCTGCCGCGCGCGGGCGAGCTGCGGCGGCGCGCTCTGCGGCGGCTGGCGGCGCTCGCGCAGTTGGCCACGTCCCGGCTGCACAGCGACAACCCGCTACATTTGAAAGCCCTTGAACAAACTAGAGCTATTTTAGCCGAGGCAAAATCGGAAACGTGA
- Protein Sequence
- MSLFRKPKKIQRRVFCADDDEDGDPEPPPPPIISQNRKENKPIKSIQLLSFADEEEDGEVFKVKKSSQSKKLAKRREKEKRRIPENDCNRVDNNEYEDIPAEEKVTEKPKKKVTLEGLILSGREALAADGTGDVSSGSENEDSRGFHQYRAESVRAALAVAPGHIPDAALIHAARKTRQQARELGDYVPIKTENAPGSRLTRDDDMEDDDDDEEDGRIEVRGLELPSDKPKRTTTATASDEEINSEAEEWEEQQMQKAVPAMADITAVLDNGEVNPFSVVPPPPRPDDAPQMRALLAPGKAPPATAQELVDALRDRLSELEATRAAALERRERCRERLLAAARVRESRAARARPLDAAYRRAQAVRGYLTDLVECLDEKMPQLEALEARALALHRRRCEFLIERRRADVRDQAQDVLALAARSGAARPVENEEKSRRTAEREGRRRARRLRREAAGTALAHRDGDSSDDEPPPAIAHAHRAAAEEIRREASALFADALPAWRSVRGVCARLARWRRRAAALYADAYIAQCLPQLLAPYIRHQLILWNPLADEDNEDYEKMDWYKCLMMYGVRSEKVSSDSEQSEEEEEAVIVTESLVRTDLDLMLVPTIIDKVVLPKVTELVEQAWDPMSVRACVRLRQLVVRAAELPRAPALPRLAAAAHARLAHALNADVFLPALPPHVVEGGGGLFWRRCLGGGVRLLRATLALCAPPPALRADPLALKLIETLCCAAGAAPGPQMAAAAAALTDTLPRAGELRRRALRRLAALAQLATSRLHSDNPLHLKALEQTRAILAEAKSET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00687890;
- 90% Identity
- iTF_00786808;
- 80% Identity
- -