Hhel011459.1
Basic Information
- Insect
- Helleia helle
- Gene Symbol
- PAXBP1
- Assembly
- GCA_963853865.1
- Location
- OY971421.1:3974560-3983119[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-20 3.8e-16 60.4 0.5 3 190 506 670 504 679 0.89 2 2 0.98 1.6e+04 -4.0 0.0 44 66 779 796 766 799 0.65
Sequence Information
- Coding Sequence
- ATGTCACTATTTcgtaaaccaaaaaaaatccAAAGACGTGTTTTTTGTGCCGATGATGACGAAGATGGTGATCCGGAGCCTCCGCCGCCGCCAATTATTAGTCAaaatagaaaagaaaataaaccgATAAAGAGTATACAATTGCTAAGTTTTGCGGATGAAGAGGAAGATGGTGAGGTATTCAAAGTGAAAAAATCATCACAAAGTAAGAAAATAGCAAAACGCAGGGAAAAGGAGAAACGTCGTATCCCTGAAAATGACTGTAACAGAGTAGACAATAATGAAGATGAGGACATACCGGCAGAAGAGAAAGTTACAGAGAAACCTAAGAAAAAGGTTACTCTTGAAGGGCTGATTCTCTCTGGACGAGAGGCGCTAGTGGCTGATGGTGCAGGCGATGTGTCCTCGGGGAGCGAGAACGAAGATAGTAGGGGTTTCCACCAGTATCGGGCTGAGTCTGTGCGTGCAGCACTCGCTGTGGCACCCGGACACATACCCGACGCGGCGCTCATCCACGCGGCGCGCAAAACTCGACAGCAGGCTCGCGAGCTGGGAGACTATGTACCTATTAAAACAGAAAAAGCTCCAGGCTCGCGCTTGGCACGTGACGATGACATGgaggatgacgatgatgatgaagaagatggAAGAATAGAAGTGCGTGGCTTAGAATTACCAAGTGATAAGCCTAAACGTACCGCCACAGCAACAGCTTCAGATGAGGAGATCAACAGTGAAGCAGAGGAGTGGGAAGAGCAACAGATGCAGAAGGCGGTACCCGCCATGGCCGACATTACCGCTGCCCTGGACAATGGAGATGTGAACCCGTTCAGCGTAGCCCCGCCCCCGCCTCGCCTCGACGACGCGCCGCAGATGCGTGCTCTGCTCGCGCCCGGACGAGCGCCGCCCGCCACCGCACAGGAACTAGTTGATGCGTTACGTGAGAGGTTGTCGGAGCTGGAGGCGACGCGTGCAGCGGCGTTGGAGCGGCGCGAGCGGTGTCGTGAGCGGCTGCTGGCGGCGGCACGCGTGCGAGAGTCCCGTGCGGCGCGCGCGCGCCCGCTCGACGCCGCCTACCGCCGCGCGCAGGCCGTGCGCGGATACCTCACCGACCTTGTGGAGTGTCTCGATGAAAAGATGCCTCAGTTAGAGGCTCTAGAGTCGCGCGCGCTAGCGCTGCATCGGCGTAGATGCGAGTTCCTCATCGAGCGGAGACGAGCTGATGTACGAGACCAAGCTCAAGACGTCCTAGCGCTTGCCGCCCGGAGCGGTGCGGCGAAGCCCGTGGAGAGCGAGGAGAAGAGCCGGCGCACGGCGGAGCGCGAGGGGCGGCGGCGCGCGCGGCGTCTGCGTCGGGAGGCGGCCGGCACCGCGCTCGCGCACCGCGATGGAGACTCCAGCGATGATGAACCGCCCCCCGCCGTCGAGCACACACACCGCGCCGCCGCAGAGGAGATCCGTCGCGAGGCGGGCGCGCTGTTCGCGGACGCGCTGCCGGCGTGGCGCAGCGTGCGCGGCGTGTGCGCGCGGCTGGCCCGCTGGCGGCGGCGCGCGGCGGCTCTGTACGCTGACGCCTACATCGCGCAGTGTCTGCCGCAGCTACTTGCGCCTTACGTCCGCCATCAGTTGATAATGTGGAATCCACTAGCAGATGAAGACAACGAGGACTACGAGAAAATGGACTGGTACAAATGTCTGATGATGTACGGCGTCCGCTCGGAGAAGGTGTCTAGCGACTCGGAGCAgtcggaggaggaggaggagccCGTCATCATCAGCGAGAGCTCGGTGCGCACCGACCTCGACCTCCTGCTGGTGCCCACCATCGTTGATAAAGTGGTGCTACCCAAGGTCACCGAGCTGGTGGAGCAGGCGTGGGACCCTCTGAGCGTGCGCGCGTGCGTGCGTCTGCGGCAGCTGGTGGTGCGCGCCGCCGAGCTACCGCGCGCGGCCGGCCTGCCACGCTTGGCCGCCGCCGCGCACGCCCGCCTCGCGCATGCGCTCAACGCCGACGTCTTCCTGCCCGCGCTGCCGCCGCACGTGGTGGAGGGTGGCGGCGGGCTGTTCTGGCGGCGCTGCCTGGGCGGCGGCGTGCGGCTACTGCGGGCCACGCTCGCGCTGTGCGCCCCGCCCGCCGCGCTGCGGGCTGATCCGCTCGCGCTCAAACTCATCGAGACGCTATGCTTCGCGGCGGGGGCGGCGCCGGGCCCGCAGATGGCGGCGGCGGCGTCGGCGCTTGCGGACACGCTGCCGCGCGCGGGCGGGCTGCGGCGGCGTGCGCTGCAGCGGCTGGCGGCGCTCGCGCAGCTGGCCGCCTCACGCCTCCACAGCGACAACCCGCTGCATCTGAAAGCCCTTGAACAAACCAGAGCTATTTTAGCAGAAGCAAAATCCGAAACATGA
- Protein Sequence
- MSLFRKPKKIQRRVFCADDDEDGDPEPPPPPIISQNRKENKPIKSIQLLSFADEEEDGEVFKVKKSSQSKKIAKRREKEKRRIPENDCNRVDNNEDEDIPAEEKVTEKPKKKVTLEGLILSGREALVADGAGDVSSGSENEDSRGFHQYRAESVRAALAVAPGHIPDAALIHAARKTRQQARELGDYVPIKTEKAPGSRLARDDDMEDDDDDEEDGRIEVRGLELPSDKPKRTATATASDEEINSEAEEWEEQQMQKAVPAMADITAALDNGDVNPFSVAPPPPRLDDAPQMRALLAPGRAPPATAQELVDALRERLSELEATRAAALERRERCRERLLAAARVRESRAARARPLDAAYRRAQAVRGYLTDLVECLDEKMPQLEALESRALALHRRRCEFLIERRRADVRDQAQDVLALAARSGAAKPVESEEKSRRTAEREGRRRARRLRREAAGTALAHRDGDSSDDEPPPAVEHTHRAAAEEIRREAGALFADALPAWRSVRGVCARLARWRRRAAALYADAYIAQCLPQLLAPYVRHQLIMWNPLADEDNEDYEKMDWYKCLMMYGVRSEKVSSDSEQSEEEEEPVIISESSVRTDLDLLLVPTIVDKVVLPKVTELVEQAWDPLSVRACVRLRQLVVRAAELPRAAGLPRLAAAAHARLAHALNADVFLPALPPHVVEGGGGLFWRRCLGGGVRLLRATLALCAPPAALRADPLALKLIETLCFAAGAAPGPQMAAAASALADTLPRAGGLRRRALQRLAALAQLAASRLHSDNPLHLKALEQTRAILAEAKSET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00687890;
- 90% Identity
- iTF_00925733;
- 80% Identity
- -