Eata024162.1
Basic Information
- Insect
- Eumaeus atala
- Gene Symbol
- PAXBP1
- Assembly
- GCA_017140195.1
- Location
- JAOYMN010002613.1:1184-13585[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 1.2e+04 -4.0 0.0 210 229 247 266 245 274 0.78 2 2 8.5e-18 9.9e-14 51.9 0.5 3 189 504 666 502 676 0.78
Sequence Information
- Coding Sequence
- ATGTCATTGTTTCGCAAACCCAAAAAGATACAAAGACGTGTTTTTTGTGGTGATGATGACGAAGATGGGGACCCTGAGCCACCACCACCGCCTATTATAAGTCATAATAGAAAAGAAAATAAACCCGTAAAAAGTATTCAATTGCTAAGTTTTGCAGATGAAGAGGAAGAGGATGGAGAGGTATTTAAAGTAAAGAAGTCATCACAGAGTAAGAAATTAGCAAAGCGTCGAGAGAAAGAGAGACGTCGTTTCCCAGATAATGATAGTAACATAATAGACAATAGCAGAGATCAGGATAAACCGGAGGAAGAGGAAATTGCAGAAAAACCAAAGAAAAAGGTGACTCTGGAGGGCCTGATATTGTCCGGTCGGGAGGCGCTTGCGGCTGATGGTGCAGGCGATGTGTCCTCCAGCGAGAACGAAGAGGACAGTAGGGGTTTCCACCAGTACCGCGCCGAGTCGGTGCGCGCGGCGCTGGCCGTGGCGCCCGGCCACATACCTGACGCCGCACTCATCCACGCGGCGCGCAAGACTCGACAGCAGGCTCGCGAGTTGGGCGACTACGTACCGATCAAGTCCGACCCCGCGCCGGGTCCGCGGCTCGCGCGCGACGACGACCTGGAGGACGATGATGATGACGAGGAAGAAGGCAGAATCGAAGTGCGCGGCTTGGAATTGCCGAGCGATAAACCCAAACGTACCACTACGGCAGTCTCAGATGAGGAGATGAACAGTGAAGCCGAAGAGTGGGAGGAGCAACAGATGCAGAAGGCTGTGCCAGCTATGGCTGACATCACAGCGGCAATGGAGAACGGGGACTTGAATCCGTTTTCTGTAGCGCTGCCGCCAGCACGCGCGGACGTCCCGCAGCTACGCGCGCTTACGCTCGGCCGCTCCCCGCCTACCTCAGCCCAGGAGTTAGTCACAGCCCTGCAGGACAGGTTGTCAGAACTGAGTTCGGTTCGCGAGGAGGCGGCAACGAGGCGCGAGCGCTGCCGCGAGCAGCTGCTGGCGGCGGCGCGCGTGCGTGAGTCGCGCGCGGCTCGAGCGGGGCCGTTAGACGCAGCCTACCGCCGCGCGCAGGCCGTGCGGGGATACCTCACCGACCTGGTGGAGTGCCTCGATGAGAAGATGCCCGCACTAGAGGCGTTGGAGTCACGTGCGCTGGCGCTTCACCGTCGGCGCTGCGAATTACTGGTGGAGCGGCGCCGCGCCGACGTGCGCGACCAGGCGCAGGACGTGCTCGCGCTCGCAGCGCGTGCCGGTGCGGCGCGTCCGGTAGAGAGCGAAGAGAAGAGCCGGCGCACAGCAGAGCGCGAGGGGCGGCGGCGCGCGCGTCGTCTCAAGCGAGAGGCGGCTGGCACTGCGCACGCGCACCGCGACGGAGACTCCAGCGACGACGAGCCGCCGCCCGCCGTCGCACACGCGCACCGCGCCGCAGCAGAGGAGATACGTTGCGAGGCGGACGCATTATTCGCGGACGCGCTGCCCGCGTGGCGCAGCGTGCGCGGCGTGTGCGCGCGGTTGGCGCGCTGGCGGCGGCGCGAGGCGACACTGTACGCGGACGCGTACATAGCACAATGTCTACCGCAGCTGCTCGCGCCCTACGTGCGTCACCAGCTGATACTGTGGAACCCTCTCGCGGATGAGGACAACGAGGACTACGAGAGGATGGACTGGTACAAATGCCTGATGATGTACGGTGTCCGCTTGGAGAGGGTATCCAGCGACTCGGAGCAGTCTGACGAAGAGCAGGCCCCGACGGTCAGCGAAGCCAGCGTGAGGACCGACCTCGACCTCATGCTCGTGCCCACCATCATAGATAAGGTTGTGCTACCTAAAGTTACTGAACTAGTAGAGCAAGCGTGGGATCCGCTGTGCGTGCGCGCTTGTGTTCGGCTGCGAACGCTCATAGCTCGCGCTGCCGAGCTTCCGCGCGCGAGTGCACTGCCGCGCCTGGCTGCCGCCGCGCACGCGCGTCTCGCAACCGCCGTCAGCGCCGACGTGTTTCTGCCGGCACTGCCTCCACAGTCAGTACTACATATAATTTTAATAGTGGCGGTGACATCCCCCCACAgcgctggtgataatgcctag
- Protein Sequence
- MSLFRKPKKIQRRVFCGDDDEDGDPEPPPPPIISHNRKENKPVKSIQLLSFADEEEEDGEVFKVKKSSQSKKLAKRREKERRRFPDNDSNIIDNSRDQDKPEEEEIAEKPKKKVTLEGLILSGREALAADGAGDVSSSENEEDSRGFHQYRAESVRAALAVAPGHIPDAALIHAARKTRQQARELGDYVPIKSDPAPGPRLARDDDLEDDDDDEEEGRIEVRGLELPSDKPKRTTTAVSDEEMNSEAEEWEEQQMQKAVPAMADITAAMENGDLNPFSVALPPARADVPQLRALTLGRSPPTSAQELVTALQDRLSELSSVREEAATRRERCREQLLAAARVRESRAARAGPLDAAYRRAQAVRGYLTDLVECLDEKMPALEALESRALALHRRRCELLVERRRADVRDQAQDVLALAARAGAARPVESEEKSRRTAEREGRRRARRLKREAAGTAHAHRDGDSSDDEPPPAVAHAHRAAAEEIRCEADALFADALPAWRSVRGVCARLARWRRREATLYADAYIAQCLPQLLAPYVRHQLILWNPLADEDNEDYERMDWYKCLMMYGVRLERVSSDSEQSDEEQAPTVSEASVRTDLDLMLVPTIIDKVVLPKVTELVEQAWDPLCVRACVRLRTLIARAAELPRASALPRLAAAAHARLATAVSADVFLPALPPQSVLHIILIVAVTSPHSAGDNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00925733; iTF_00786808;
- 90% Identity
- -
- 80% Identity
- -