Basic Information

Insect: Parnassius orleans
Gene Symbol: stc
Assembly: GCA_029286625.1
Location: JAGSMP010000121.1:3429048-3474982[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3 7.5e+04 -4.5 1.6 15 19 464 468 463 468 0.81

2 15 0.082 2e+03 0.9 1.4 2 10 496 504 496 504 0.92

3 15 6.2e-05 1.5 10.9 18.1 4 19 512 527 510 527 0.93

4 15 9.4e-08 0.0024 19.9 13.3 1 19 563 581 563 581 0.97

5 15 0.00023 5.7 9.0 15.0 1 19 622 640 622 640 0.99

6 15 3.9e-07 0.0097 17.9 13.8 1 19 681 703 681 703 0.88

7 15 3 7.5e+04 -5.4 2.2 6 10 733 737 733 737 0.94

8 15 0.025 6.3e+02 2.5 7.3 1 11 743 753 743 754 0.93

9 15 0.071 1.8e+03 1.1 0.3 4 10 758 764 757 765 0.93

10 15 6.2e-06 0.15 14.1 14.0 3 19 772 788 770 788 0.92

11 15 1.9 4.7e+04 -3.5 0.7 5 10 816 821 816 821 0.89

12 15 0.11 2.7e+03 0.5 8.4 10 18 835 843 832 844 0.92

13 15 9.6e-08 0.0024 19.8 13.8 1 17 880 898 880 904 0.84

14 15 0.014 3.5e+02 3.3 12.6 1 19 910 933 910 933 0.88

15 15 1.5 3.8e+04 -3.2 0.2 7 12 948 953 948 953 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3	7.5e+04	-4.5	1.6	15	19	464	468	463	468	0.81
2	15	0.082	2e+03	0.9	1.4	2	10	496	504	496	504	0.92
3	15	6.2e-05	1.5	10.9	18.1	4	19	512	527	510	527	0.93
4	15	9.4e-08	0.0024	19.9	13.3	1	19	563	581	563	581	0.97
5	15	0.00023	5.7	9.0	15.0	1	19	622	640	622	640	0.99
6	15	3.9e-07	0.0097	17.9	13.8	1	19	681	703	681	703	0.88
7	15	3	7.5e+04	-5.4	2.2	6	10	733	737	733	737	0.94
8	15	0.025	6.3e+02	2.5	7.3	1	11	743	753	743	754	0.93
9	15	0.071	1.8e+03	1.1	0.3	4	10	758	764	757	765	0.93
10	15	6.2e-06	0.15	14.1	14.0	3	19	772	788	770	788	0.92
11	15	1.9	4.7e+04	-3.5	0.7	5	10	816	821	816	821	0.89
12	15	0.11	2.7e+03	0.5	8.4	10	18	835	843	832	844	0.92
13	15	9.6e-08	0.0024	19.8	13.8	1	17	880	898	880	904	0.84
14	15	0.014	3.5e+02	3.3	12.6	1	19	910	933	910	933	0.88
15	15	1.5	3.8e+04	-3.2	0.2	7	12	948	953	948	953	0.80

Sequence Information

Coding Sequence: atgTCGCATTGGAATAACTCATACACTTATAACAACCAGTTCCAAGGAGCGCCCAATACATGGAACAGTGATTTAAGTGGGCAATATGTAAACCAGCCATATTATGGAAACAGACAATTTGAGTCAAACAATCAGTATGTCAGTTTTGAAGAATTCTTAACTCAAATGCAGGGTAATAGTGTTCCACAGAATAATGCTTCTAACTATAATAATGTACAGTACCAGGCCTATCCCAATAATCAATATAGTTATCAAAATGTACCCTCACAAAACAATCAAATGGATTTTAACTATGGTCCTAGCTCATCCAATGCCAGTAACAATATAGATACTTATCAAGTCAATGTTCAAAATCATTTGAACCCAGTGTTAACTGATCCAGGTTCTTATTCCAATGAAGTTGTGATTAAGTCTAAGCTCACACCAACTGCAACTGAATTTGTGCCAAAAAGCTCTATGAATTTACCATCTACCAGTACTCAAAGTGCTTCATCACAGGTGTCAGATACATCTAATGGTGTAAGCGAATTAAAACCTAATAATTCAAAATCATCTGAAAGTAATTGGAGAGAAAGGCCAAGAAATTCACACAGTGAAGCTAAAAATTCTCAAACTGATATAAacaattttagtcgttatcaaaagaagtataaaaaCCCAGAAAACACTACTCGGAACTCAAATGGCCgtaacattgaaaataataaacgtaACAATGAATCACATCAAGATCCCAATAATCGTTATCATAACAGCAATAACCATTACATAGATTCTTCCATTCAAAACCAAGAAGCAGAAAGTCAAAGTACAGAATCCCATTCTAACCAAAATGATAGAAATTATGACTCTGGAAACCATATGTATGAATCTAAAAAATCTAGTAACGATACCTATCCATCAAAgtcaaattataaaacaaaaaataaagaacCAGAGGCATGTAGAACTTTTTACAATAGCACTATAAATAAAAGCAGCCAAGATGTTAGAAATGGTAGAGGAGAAAGTTCTGGAAGGCAGAAAAACTGGGTAGGAAGTCAACGGGTACGAACAGTGGACCGTAATATTGTTGACGATGTACAATATGCTAATACTTACATGCAATATAAAGATGAAAGAGTAGAGAGAGTGACAAAAAGTGAAAAGACTGCTAGTCCTAATAGGGGAAGAAACAAGATTGTCACTGAATTAGTAGgtAACTCTGCAATGACCCAACGTGAACGTTTGACTGAGCAATTAGACAAGGGCACTTTAGAATGCCTGGTGTGCTGTGAAAGGGTCAAACAAATTGATTCAGTTTGGTGGTGTTCCAATTGTTACCATGTCTTACATCTTAGATGTATCAGGAAATGGGCTATGAGTAGTTTAGTTGAAGGTAAATGGCGATGCCCAGCTTGTCAGAACACGAATGAAGAGATTCCTATGGAGTACCGTTGTATGTGCGGTGCGGTCCGATCACCTGAGTACTCACGTGGCGCAGTAGGAGCACATACATGTGGTAAAGCCTGTCGCAGACCGAGGAGCTGCCCACATCCTTGCACACTGCTATGCCACCCTGGTCCGTGTCCTCCTTGTCAAGCTACTATCAGCAAGAAATGTGGTTGCGGTGCTGAGACGCGCTCTGTACTCTGCAGCAGCAAACTGCCGCAGCTGTGCGGTCGAGAGTGTAAACGTAAGCTGGCGTGCGGAGTTCACGAATGTCAACGTGAATGCCACGAAGGTCCCTGCGATGATTGTTCAGAAACTGTAACACAAGTGTGCTACTGCCCTGCGGCGAAGTCCCGCTCGGTGCCATGCACAGCGGAGACCGGCACTTGTGACACATGGTCCTGCGGGGCGGAATGCGCTCGTGTTCTGTCGTGCGGCGCGCACGTGTGTAGACGTGCGTGCCATCCGCCGCCGTGCTCGCCTTGCCCGCTGCGCCCCGAGAACGTAAAAGCCTGCCCCTGCGGGAACACCAGaatTGAAAAAGATCAGCGAAAGTCATGTGCCGATCCTATTCCCCTTTGCGGAAATATATGTGCAAAACCGTTACCATGCGGTCCTGAAGGAGACAAACACTTTTGTAAACAGTTGTGTCATGAagGACCATGCCCAACATGCCCGGATAAAACACTGTTGCCCTGCCGCTGTGGTCATTCAAGTCGCGAAGTGCCTTGTTCAGAATTGCCAGAAATGATCAATAATGTACTGTGCCAAAAGAAGTGTAACAAGAAGCTGTCGTGCGGGCGGCACCGCTGCCGCACGGCGTGCTGCGCGGCGCAGTCGCACCGCTGCGCCGTGGTGTGCGGCCGCACGCTGTCGTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCGCGCCCTGTCCCCGCCTCAGTTTCGATGAACTCCGATGCGAGTGCGGTGCGGAAGTGGTTCTACCGCCAGTGCGCTGTGGCACCAGACCTCCGAAGTGCAACGCTCCTTGCCGTCGCGAGAGGCCTTGCAAGCATCCACCCCACCATTCCTGCCACACCGACGACTGCCCGCCTTGTGTGGTGCTTACCACCAAGATGTGTCACGGACAGCACGAGGAGCGCAAGACTATACCGTGTTCGCAAGAAGAGTTCTCATGTGGAATGCCGTGCGGAAAACCTTTGTCCTGTGGCAAGCATACTTGCATCAAGACATGCCACAAAGGACCTTGTAATACTGAAAAGTGCAGCCAGCCGTGCACGGAGAAGCGTCCGAGCTGCGGGCACCCGTGCGCGGCGCCGTGCCACGTGGCGGGCGGCGGCGCGTGCCCCAGCAGCGCGCCGTGCCGCCGCACCGTGCGCGCCACGTGCCCCTGCGCGCGCCGCACCGCCGAGCGCATGTGTCACGAGAACGCGCGCGACTACGCCAAGATGATGAGTACGCTAGCGGCTACGAAAATGCAAGAGGGAGGCTCCGTAGACCTATCTGAAGTGCAACGCCCTGGATCAATGCTGAAGACGCTGGAGTGCGATGACGAGTGCCGCATGGAGGCACGCAGCCGGCAGCTGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCAGCACCGCCGCGCGCGAGCCCGCCTTCGCGCAGCACGTGCACGACTGCCTCGCCGACCTCGTGCAGCGCGCCAAGAAGGTACCTACCTGCGCGCAGCACGTGCACGACTGCCTCGCCGACCTCGTGCAGCGCGCCAAGAAGGTACGTGCGTACAGCTACCTGCGCGCAGCACGTGCACGACTGCCTCGCCGACCTCGTGCAGCGCCAGAAGGTACGCACAGCTACCTGCGCGCAGCACGACTCACCGCCTCGCCGACCTCGTGCAGCGCGCCAAGAAGGTACGTGCGTAGCTACTGCGCGCAGCACGTGCACGACCGCCTCGCCGACCTCGTGCAGCGCGCGCCGGGCGTATGCACAGCTACCTGCGCGCAGCACGTGCACGACTGCCTCGCCGACCTCGTGCAGCGCGCTAAGAAGTCGAAGCAGAAGACGCGCTCGCACTCGTTCCCTTCAATGAACCGTCAAAAGCGACAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGTGTCGCGTACGACGCGGAGCCCAACCGGAATGTGGTCGCCACCGCTGACAGGGAAAAGTCGGTTGCCGGCGATGAGTGTTTTGAAGTGTTAGCTCGAGAAGGGCAAACGTCGCGTTCCCGGACCGGTACTGCGGGCGCCAGCTACCATCGCCAGTACAGCACCAGCGACTCCCCACTACTTCCACCAGtttaccgtcaagcttgcagcgcgcttgaagcggcgtccAGTTTGCAGTGCATCCATATAGACCACTCACGTTCAAGTTCGCTGTATAGTTTGCATGATGCCACACCAGTTGAAACCATGGCGTCACCAGTGACGGACGACGACGCGACAACCAGCGGCTGGGCAACTCTGACTTCGACGAACGCCTGGGCTTCCCGCAGCCAGCCGCGACCGACCGCTGAACCCAAAATAGATTATTTCGACAATCCGCCCGAAAACTAG
Protein Sequence: MSHWNNSYTYNNQFQGAPNTWNSDLSGQYVNQPYYGNRQFESNNQYVSFEEFLTQMQGNSVPQNNASNYNNVQYQAYPNNQYSYQNVPSQNNQMDFNYGPSSSNASNNIDTYQVNVQNHLNPVLTDPGSYSNEVVIKSKLTPTATEFVPKSSMNLPSTSTQSASSQVSDTSNGVSELKPNNSKSSESNWRERPRNSHSEAKNSQTDINNFSRYQKKYKNPENTTRNSNGRNIENNKRNNESHQDPNNRYHNSNNHYIDSSIQNQEAESQSTESHSNQNDRNYDSGNHMYESKKSSNDTYPSKSNYKTKNKEPEACRTFYNSTINKSSQDVRNGRGESSGRQKNWVGSQRVRTVDRNIVDDVQYANTYMQYKDERVERVTKSEKTASPNRGRNKIVTELVGNSAMTQRERLTEQLDKGTLECLVCCERVKQIDSVWWCSNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTNEEIPMEYRCMCGAVRSPEYSRGAVGAHTCGKACRRPRSCPHPCTLLCHPGPCPPCQATISKKCGCGAETRSVLCSSKLPQLCGRECKRKLACGVHECQRECHEGPCDDCSETVTQVCYCPAAKSRSVPCTAETGTCDTWSCGAECARVLSCGAHVCRRACHPPPCSPCPLRPENVKACPCGNTRIEKDQRKSCADPIPLCGNICAKPLPCGPEGDKHFCKQLCHEGPCPTCPDKTLLPCRCGHSSREVPCSELPEMINNVLCQKKCNKKLSCGRHRCRTACCAAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRLSFDELRCECGAEVVLPPVRCGTRPPKCNAPCRRERPCKHPPHHSCHTDDCPPCVVLTTKMCHGQHEERKTIPCSQEEFSCGMPCGKPLSCGKHTCIKTCHKGPCNTEKCSQPCTEKRPSCGHPCAAPCHVAGGGACPSSAPCRRTVRATCPCARRTAERMCHENARDYAKMMSTLAATKMQEGGSVDLSEVQRPGSMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRSTAAREPAFAQHVHDCLADLVQRAKKVPTCAQHVHDCLADLVQRAKKVRAYSYLRAARARLPRRPRAAPEGTHSYLRAARLTASPTSCSAPRRYVRSYCAQHVHDRLADLVQRAPGVCTATCAQHVHDCLADLVQRAKKSKQKTRSHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSVAGDECFEVLAREGQTSRSRTGTAGASYHRQYSTSDSPLLPPVYRQACSALEAASSLQCIHIDHSRSSSLYSLHDATPVETMASPVTDDDATTSGWATLTSTNAWASRSQPRPTAEPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00923295;
90% Identity: -
80% Identity: -