Basic Information

Insect: Lucilia sericata
Gene Symbol: RREB1
Assembly: GCA_015586225.1
Location: NW:26980-37389[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.023 1.1 9.6 1.7 1 21 225 245 225 247 0.95

2 14 0.00039 0.018 15.2 0.2 1 23 257 279 257 279 0.98

3 14 2.7e-05 0.0013 18.8 7.5 1 23 285 307 285 307 0.98

4 14 2 94 3.5 0.0 2 23 531 554 530 554 0.86

5 14 0.36 17 5.8 2.5 2 19 560 577 560 577 0.97

6 14 0.023 1.1 9.6 0.0 1 23 720 742 720 742 0.97

7 14 1.3e-05 0.00062 19.8 1.2 1 23 752 774 752 774 0.99

8 14 0.00096 0.045 13.9 2.0 1 23 780 803 780 803 0.97

9 14 0.0034 0.16 12.2 2.0 1 23 1155 1178 1155 1178 0.95

10 14 0.00021 0.0098 16.0 1.0 3 23 1516 1536 1514 1536 0.97

11 14 0.17 7.8 6.9 6.3 1 23 1542 1565 1542 1565 0.97

12 14 7.6 3.5e+02 1.7 2.0 1 23 1666 1689 1666 1689 0.80

13 14 0.098 4.6 7.6 1.1 3 23 1742 1762 1741 1762 0.91

14 14 0.0012 0.054 13.7 5.7 1 23 1768 1790 1768 1790 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.023	1.1	9.6	1.7	1	21	225	245	225	247	0.95
2	14	0.00039	0.018	15.2	0.2	1	23	257	279	257	279	0.98
3	14	2.7e-05	0.0013	18.8	7.5	1	23	285	307	285	307	0.98
4	14	2	94	3.5	0.0	2	23	531	554	530	554	0.86
5	14	0.36	17	5.8	2.5	2	19	560	577	560	577	0.97
6	14	0.023	1.1	9.6	0.0	1	23	720	742	720	742	0.97
7	14	1.3e-05	0.00062	19.8	1.2	1	23	752	774	752	774	0.99
8	14	0.00096	0.045	13.9	2.0	1	23	780	803	780	803	0.97
9	14	0.0034	0.16	12.2	2.0	1	23	1155	1178	1155	1178	0.95
10	14	0.00021	0.0098	16.0	1.0	3	23	1516	1536	1514	1536	0.97
11	14	0.17	7.8	6.9	6.3	1	23	1542	1565	1542	1565	0.97
12	14	7.6	3.5e+02	1.7	2.0	1	23	1666	1689	1666	1689	0.80
13	14	0.098	4.6	7.6	1.1	3	23	1742	1762	1741	1762	0.91
14	14	0.0012	0.054	13.7	5.7	1	23	1768	1790	1768	1790	0.99

Sequence Information

Coding Sequence: atgttaGTCGCCACAAATGCCCAACAAACTGCCCAAAACAGTCCCAAAACCACCAGATCGAATACACCCATTAAAATGGAAAGACGTGATTCTTCATCTTCATATTCGTCTTTGGAAGATTTGGAACATGAGGGTAAAAAATTGAATGCTGTTACCTCAACACCGGTGGTGACAAGTGATGCTACCATATCTTGTGCTGTTAACTCTATGACAAGATCTAATCAAAGATCGGAAATGGATAATAATTTGCATCAACGTATGCAAGAATCCGATGAGGCTAATGATTATGATGAAGATGAATCGGCTGATGAGAAATCTTCTCAGCCACGTCAGCAATTGCACTATAAACGCCGTTTGAGCGGTCGCAGTCTTACAGATAAAACTGCCAGTGTTCTGCTGGAGTATAATGCTGATAATCCCAATTCTTTACGCAAGAAATTCCGTTTTAATCGCTTTGTCCTAAACAATGGTGATGAATCGGGTTTTGTTGATACCAGCAATAATAGCCAAATGTTAAATAACTCATCTTCAACTTTGGCTGCTAACGCCACAAATCTAACAAACTCAAATAGTGTTGTAAAATCAAATAGTTCTTCGGAAACCTCCTCACCGCCCCAAAGTAATGGCAATTCTAGTCCTGAATCGGGCATAGGAGAACGCGAggatatgaaatatatgtgtcCCATCTGTGATGCCGTCTCACAAACAGCCCATCAATTTACAAATCATATACGTTGTCACAACTACGCCTCAGGTCATACGGAGAACTTTACCTGCCGTATTTGCTCTAAGGTGCTCTCATCAGCCTCATCATTGGATCGTCATGTTCTAGTGCATACGGGAGAACGAccatttaattgtaaatattgtcATCTCACATTTACCACAAATGGTAATATGCATCGTCATATGCGTACCCATAAACAGCATCAGCATACTCATCATCGACGCAACTCGAATGGAACAAAGTTCAActcaaacaataataataataattataataacacaacaacaacaacaacgaatcCCGCTgtaagcaaaacaacaacattaagcAATGGACAATTAAGTGAAGGCGTTAAattatcaacaacaacagcagcagacaCAACGACGTCGTCAACAACAGTCACAAGTATAGCAGCGCCAACATCGCcgtcagcagcagcaacaacagccaCAAATACTGTTAACGCTGCTGACAATGATTGTAATCAAAAGGCAACAGGTGCTAATGGCAAACGATTAAATGGTAACGCCAACTTAGAAAGTTATGAAAGTGATGGTGGCTGCTCATCAGACTCATCAGCAGGCCATgttagcaacaacaataacaacaacaatgacaaccaaaataataataacaataatgatttaaaaattaacaataataactATAAACGCAAACATTGTGAAGATCAGCCTCATCAAGATGTAGTAGATGCTATGGAAAGCAGCCATCATGATCTTTTAAAGCGACGTTTAAGACTcgaaagcaacaacaataacaacagcgaTACCACAAACTCACCTGCCAACTCCAATGAACAGAATAATGATCTTATAAGCCGTATAACTAGAGAATCAGTTGTTTGTCCCGTTTGCAATGAGAGTGATTTTTCGGATAATATGGCTCTTGATCAGCATATGGATAGTAAGCATCCGGAAATACCAGCCAAATGTAAAAACTGTGATGTTTTATTCCGTACCCATCATCAGCTCAATATACATCCCTGTACGGCCGATATTAAGGGATCCATAAATTTATCGGTTAAACAGCGTCGTTCGAGTGAAAGTTCAAATCATCATAACGATGAAGAAGATCGTGAGGAAACGGAAGATCATCTTAGGCAACGCCATGAactttttcaacattttaaaaatgccATGGCTCATAGCAATTCCCATTCGTCACATTTTAATCAAGATCTAACGGAGGATGATATTAAATCGGAACCTTCAGCTCATGATTCCAAGGATTTGGCCGATATTCAATCGATCTTGAATATGACCGCCTCATCTAGTAACTCAAATTTACTGAGAAACTTTGAGCAATCGGTAAATACTCCATCCTCGCAATATAGTTATGATAGGGATGAAGAGGAGGCTCAAGATGCTTTCACTTCGGAATTCCGTAAAATGAAATTGCGTGGTGAATTTCCCTGCAAGTTGTGTCCGGCAGTATATCCTAATTTGCGTGCTCTAAAAGGCCATAATCGTGTGCATTTGAGTGAAGCCGGTCCAGCAGGTCCTTTCCGCTGCAACATGTGCCCTTATTCGATATGTGACAAGGCCGCCTTAATACGTCATATGCGTACACATAATGGTGATCGTCCCTATGAGTGTGCTGTCTGTAATTATGCCTTTACCACAAAAGCCAATTGTGAAAGACATTTGCGTAATCGTCATGCAAAAACGACTAGAGAGGAAGTTAAACGTGCCATTATTTATCATCCCTCAGAAGATTCATCCTGTGAAGATACTAACAAAAAATTGCATATGTTTTCATCCGAATTGGAGGATGATTGCGATTTAATGTCGTATCATCAGCATCAGCCCAAGGATCGTTCAACTCCTGTATCTCATCTCAAGGAGAGACTGACTTTGGGTGAAAGTCCTTCATCCAAACCTGTTAAGATTCAGGTGAAAAATCTTGAAGATCTTTTAGATAAATCAACAGCTTCATCGGGTTATCATGATAGCTATGACAAACGTAATGTTGATAAATCGCAAGCTCCAATTGATATGAGTATGGATGTTTTGGATTTGAGTAAAAAACCCAGTGCACCACAGCCACCAGTCCAAGAAGAAAAGATCGAATCTTCTATACCTTTACTCTCGTTGCCCAAACCAGATGCCAACCTTAATAATGAAGTAATTACCAACAAAGCCATGCCTGCTGAAGCTGATCCAAAATTAGATGTTTCTGCCTTGGATAAACAGCACCAGCAGTTACTTTTGGCCCAACAGCAGTTACTCAGTGATCCCAATCAATTAATGCAGCAATTATATAGAAATCTACTGTTTCCTCAATTTCCTCCATTCTTTATGCCCAACACTTTTATGAATAATAATTTCACTGATTTTCAAAAACTGGCTCCCATTCTAACACGTATGATGGGTGGAGTGGCAGCAGCAACTTTGCCAAACAACGATCTAGAAAAACCATCAAATTTGGCACCTCTCAATACCAATAACTCACCAAGCATACCACAAATGAGTCCATTATTAACTGAAAAATCGAATCCAGCTACTATGGCTTCAATGTCATCACCCAAGAGTCTACATTCACCAAATCCTAATCATGTATCTATGCCTAGACATATGATGGCTCCAGCCGCATCTTCACATCCCCCAAATCTGCCACCCACCATGCTTTCAAATGGTCCTATCAAAATGGTGCTCAAAAATGGTGTGTTCATgcccaaacaaaaacaaagacgTTATCGTACTGAACGTCCTTTTGCCTGTGAACATTGTTCAGCTCGTTTTACTTTGCGCTCCAATATGGAACGTCATGTCAAACAACAGCATCCCCAATACTATGCTCAACGTCAACGGAGTGGTCACCATGTTATGCGTGGTCGTGGTGCTAGCAGTGCTGCTAATATGAACAATATCACTCATTTACAAGCTGCTGTTGCCCAGGCTCATTATGGCTCTACACCTCCCTCAATGAGTTCCCATTCACCAATTTCGGAACAGGTCAAGTGTGCCATTTTAGCTCAGCAACTTAAAGCTCGCAAAGATACCGATCTGCTACAACAAGCCTTGGCTCATGGTTCCAACAGTGTTGCCAACTCAAATATGTTTTCTCAACAAGGACCCAACCTAAGCAATGGACAACCACCTTTTTTTGGTTTCAATCCTCATCATAGTCATCATCTAAGCCAAAATGGTACACCTAATGGTTCCATGGAAGATGATGAACCCAAGCTAATAATtgatgaagatgatgaagaGGAGGAAGAAGACGAAGATGACATTGAGGAAATTCACGATGATCAGGATGAAGAGGAAGAACAAGATTTGGTGTTGCATGAAAGCGAAGATAAAATAGAAACACGCCATTTACCCACTACTGTTGAAGAGGTAAAACTCAAATCGGATCCTCCTCAAGAATCGGCTAAAAAAGTGGCTGAATCTATTTTGGAACAAGCCATTAAAGCCAGAACTATAAGCTCATTTGCTAAAACAACAGAACCTTCTACAGTGACCTCCAATAATAATGCCATGAAATCGATGATTGCTCAAGCTCCAGCAgtgggaaaaattttaaaagaagtaGCAAGTTCTTCTTTTAAGGATGAATCTCAAGACTTGGTTTCTGTCTCCGAATTAGTAGACAATGCCACCAATAATTCAGTGTCATTCAACAACTATTTCCGTCCTTCCGATGTGGCCAATCATATGGAACCCAGTGATGAAGATGGTTTAGTGGCATCCTCAGCCAGTGAAAGTAACAATTCGGGTGCTGAAGATACTGTAAGTACTGAAAAACCCAAAAAGAAGTCAGCCTACAGTTTGGCTCCCAATCGGGTTCATTGTCCCTACTGTCAACGTATGTTCCCCTGGTCCAGTTCCTTGAGAAGACATATTCTCACTCATACCGGACAGAAGCCCTTCAAATGTTCTCACTGCCCTCTTTTGTTTACCACCAAAAGTAACTGTGATCGTCATCTTTTACGCAAACATGGGGATGTAGAGTCGGCTGTATCGGTGTATGTACCAACTGAAGATGTTTCCGAACCTATTCCTTTGCCCAAGTCCGTGGAAGAGATAGAGAGAATGCAAAGAGAACGTGAAGAAGAGGAACGCAAACGTAAAGCCGAAGAACAAAGAGAACGTTTAGAGAAAGAGCAAATGGAAAAGCAAAAGTTTGAACAggagcagcaacaaaaacaagcaTTCCTTAAGCATTTGGCTGTCGCACAATTTCAACAGCAATTTAACCAAAAAACCGAAACCAATTCAGTTTCTTCTTCAGAACTGCCCTATAAATGCCACTTGTGCGAAAGTTCATTTGCGGAACGTTTGCAATGTCTTGAACATATTAAAGCTTTACATGCACAAGAATTTGCTTTACTGCTGTCAAAGGGTGCCATTGAAAATGAAACTGACTCAGCTCAAATGACTTCAACTGAAGAAGATGAACGTCAACGTTCTGCCGAAGATGGCGGCAAGGGTGGCAAGTATCCCGACTACAGTAATCGTAAAGTTATTTGTGCCTTTTGCATGAGACGTTTCTGGTCAACTGAAGATCTGCGAAGACATATGCGCACTCATTCTGGTGAAAGACCATTCCAATGCGAAATCTGTTTCAGAAAGTTCACCCTAAAACACAGTATGCTCCGCCACATGAAGAAACACAATGGTCTACACATGAATGGCAGTCAGTCGAATAATGACAATTTGGCCAATGGTAATTCCGGCTCTGATTACTCCGATGATGAACAAAGTCCAAATACAATGCCTACACCAGCTATGCCATTGCCCAGTACCAGCATCAATGCACTATTAATGGGTTCAAAATTCCAAGAACTGCTAAGCAAAGCAAACGAATGGAGAAATGGTAATTTGAATGCATTGCGCGAAGGTAAAGAAAACAATTCAGAGGAACCAAATACACCTCAATCATCAGATTTAATTGGCAATTTGCTGGGTATCAGCGATCAGggtatattaaacaaattaatgtcATCACCTGATGAAGCTGCCAAATTTTTAGGTGTTGACAAATAA
Protein Sequence: MLVATNAQQTAQNSPKTTRSNTPIKMERRDSSSSYSSLEDLEHEGKKLNAVTSTPVVTSDATISCAVNSMTRSNQRSEMDNNLHQRMQESDEANDYDEDESADEKSSQPRQQLHYKRRLSGRSLTDKTASVLLEYNADNPNSLRKKFRFNRFVLNNGDESGFVDTSNNSQMLNNSSSTLAANATNLTNSNSVVKSNSSSETSSPPQSNGNSSPESGIGEREDMKYMCPICDAVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNSNNNNNNYNNTTTTTTNPAVSKTTTLSNGQLSEGVKLSTTTAADTTTSSTTVTSIAAPTSPSAAATTATNTVNAADNDCNQKATGANGKRLNGNANLESYESDGGCSSDSSAGHVSNNNNNNNDNQNNNNNNDLKINNNNYKRKHCEDQPHQDVVDAMESSHHDLLKRRLRLESNNNNNSDTTNSPANSNEQNNDLISRITRESVVCPVCNESDFSDNMALDQHMDSKHPEIPAKCKNCDVLFRTHHQLNIHPCTADIKGSINLSVKQRRSSESSNHHNDEEDREETEDHLRQRHELFQHFKNAMAHSNSHSSHFNQDLTEDDIKSEPSAHDSKDLADIQSILNMTASSSNSNLLRNFEQSVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCPAVYPNLRALKGHNRVHLSEAGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDTNKKLHMFSSELEDDCDLMSYHQHQPKDRSTPVSHLKERLTLGESPSSKPVKIQVKNLEDLLDKSTASSGYHDSYDKRNVDKSQAPIDMSMDVLDLSKKPSAPQPPVQEEKIESSIPLLSLPKPDANLNNEVITNKAMPAEADPKLDVSALDKQHQQLLLAQQQLLSDPNQLMQQLYRNLLFPQFPPFFMPNTFMNNNFTDFQKLAPILTRMMGGVAAATLPNNDLEKPSNLAPLNTNNSPSIPQMSPLLTEKSNPATMASMSSPKSLHSPNPNHVSMPRHMMAPAASSHPPNLPPTMLSNGPIKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRSGHHVMRGRGASSAANMNNITHLQAAVAQAHYGSTPPSMSSHSPISEQVKCAILAQQLKARKDTDLLQQALAHGSNSVANSNMFSQQGPNLSNGQPPFFGFNPHHSHHLSQNGTPNGSMEDDEPKLIIDEDDEEEEEDEDDIEEIHDDQDEEEEQDLVLHESEDKIETRHLPTTVEEVKLKSDPPQESAKKVAESILEQAIKARTISSFAKTTEPSTVTSNNNAMKSMIAQAPAVGKILKEVASSSFKDESQDLVSVSELVDNATNNSVSFNNYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTVSTEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVSEPIPLPKSVEEIERMQREREEEERKRKAEEQRERLEKEQMEKQKFEQEQQQKQAFLKHLAVAQFQQQFNQKTETNSVSSSELPYKCHLCESSFAERLQCLEHIKALHAQEFALLLSKGAIENETDSAQMTSTEEDERQRSAEDGGKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICFRKFTLKHSMLRHMKKHNGLHMNGSQSNNDNLANGNSGSDYSDDEQSPNTMPTPAMPLPSTSINALLMGSKFQELLSKANEWRNGNLNALREGKENNSEEPNTPQSSDLIGNLLGISDQGILNKLMSSPDEAAKFLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260066;
90% Identity: iTF_00260066; iTF_00259205; iTF_00200204; iTF_00045590; iTF_00921613;
80% Identity: -