Lmag020245.2
Basic Information
- Insect
- Lordiphosa magnipectinata
- Gene Symbol
- kn
- Assembly
- GCA_018904285.1
- Location
- JBAMBO010003648.1:70175-74713[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-120 1e-115 388.0 0.0 205 384 1 209 1 213 0.99 2 2 5.1e-08 0.00075 18.6 12.3 422 510 214 302 209 308 0.60
Sequence Information
- Coding Sequence
- ATGCGAAGATTTCAGGTTGTCATCTCCACCCAAGTGGCCGTAGATGGACCTCTGCTGGCCATCTCGGATAACATGTTCGTGCATAACAATTCCAAGCATGGAAGGCGTGCCAAGCGACTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCGCCACTGCCCGTGGCCACGCCCTGCATTAAGGCCATCTCACCCAGCGAGGGTTGGACAACGGGCGGAGCCACTGTCATCATAGTGGGCGATAACTTTTTTGATGGCCTGCAGGTGGTCTTTGGCACCATGCTGGTGTGGAGTGAGCTAATCACCTCGCATGCCATACGAGTGCAAACACCACCCAGGCATATACCCGGCGTGGTGGAGGTCACGCTCTCGTACAAAAGCAAACAATTCTGCAAGGGATCACCCGGTCGCTTTGTGTATGTCTCAGCACTCAATGAACCCACCATTGACTACGGTTTCCAGCGTCTGCAGAAGCTTATACCCCGGCATCCCGGTGATCCCGAGAAGCTGCAAAAGGAGATTATACTTAAGCGTGCTGCCGATCTAGTAGAAGCTCTCTACTCCATGCCCAGCAGATCACCTGGTGGCTCCACCGGTTTCAATTCATATGCCGGCCAACTGGCGGTGAGCGTACAAGACGGCTCGGGTCAGTGGACAGAGGATGACTATCAGCGCGCTCAGTCAAGCAGTGTGAGTCCTCGAGGCGGTTACTGCAGCAGCGCCTCTACGCCACATAGTTCAGGTGGCTCGTATGGGACCACAGCAGCGACTGCAGCCGTAGCGGCCACAGCAAATGGTTACGCACCCACACCCAATATGGGCACATTGTCCTCCTCGCCGGGCAGTGTTTTCAATTCAACATCAAGTGAGTAG
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGTTAATAAVAATANGYAPTPNMGTLSSSPGSVFNSTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00919652; iTF_00914286; iTF_00915120; iTF_00916016; iTF_00916980; iTF_00919608; iTF_00915066; iTF_01556612; iTF_01558064; iTF_01558769; iTF_01558014; iTF_01558816; iTF_00587141; iTF_00585702; iTF_00597894; iTF_00495601; iTF_00597939; iTF_00585748; iTF_00587188; iTF_00495646; iTF_00518943; iTF_01559496; iTF_00565167; iTF_01559544; iTF_00565119; iTF_00474249; iTF_00611185; iTF_00474297; iTF_00611135; iTF_00473568; iTF_00603089; iTF_00603138; iTF_00508059; iTF_00508108; iTF_00802619; iTF_01570027;
- 90% Identity
- iTF_00919652; iTF_00914286; iTF_00915120; iTF_00916016; iTF_00916980; iTF_00919608; iTF_00915066; iTF_01556612; iTF_01558064; iTF_01558769; iTF_01558014; iTF_01558816; iTF_00587141; iTF_00585702; iTF_00597894; iTF_00495601; iTF_00597939; iTF_00585748; iTF_00587188; iTF_00495646; iTF_00518943; iTF_01559544; iTF_01559496; iTF_00508059; iTF_00508108; iTF_00802619; iTF_01570027;
- 80% Identity
- -