Dosh016576.1
Basic Information
- Insect
- Drosophila oshimai
- Gene Symbol
- kn
- Assembly
- GCA_018150695.1
- Location
- JAECWM010000224.1:7195789-7197925[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-119 9.2e-116 387.4 0.0 205 384 1 209 1 213 0.99 2 2 8.2e-08 0.00071 17.9 15.7 422 520 214 312 209 329 0.67
Sequence Information
- Coding Sequence
- ATGCGCCGCTTTCAGGTGGTGATTTCCACGCAGGTGGCCGTGGACGGACCACTCCTGGCCATCTCCGACAACATGTTTGTGCACAACAACTCGAAGCACGGACGGAGGGCCAAGCGACTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTATCCACCGCTGCCTGTGGCCACGCCCTGCATCAAGGCGATCTCGCCCAGCGAGGGCTGGACAACCGGAGGAGCCACAGTGATCATAGTGGGGGACAACTTCTTTGACGGCCTGCAGGTGGTCTTTGGCACCATGCTGGTCTGGAGCGAGCTGATCACCTCGCACGCGATCCGGGTTCAGACCCCACCGAGGCACATTCCCGGCGTGGTGGAGGTGACGCTATCCTACAAGAGCAAGCAGTTCTGCAAGGGATCGCCCGGCCGCTTCGTCTATGTCTCAGCTCTCAACGAACCCACTATCGACTACGGTTTCCAGCGCCTGCAGAAGCTCATTCCCCGGCATCCCGGCGATCCAGAGAAGCTGCAAAAGGAGATAATCCTCAAGAGGGCAGCTGACTTGGTGGAGGCTCTGTATTCCATGCCCAGCAGATCCCCGGGCGGCTCTACGGGCTTCAACTCCTATGCCGGCCAACTGGCGGTCAGCGTGCAGGATGGCTCTGGCCAGTGGACCGAGGACGACTACCAGCGGGCCCAGTCGAGCAGCGTCAGTCCCAGGGGCGGCTACTGCAGCAGCGCCTCCACTCCGCACAGCTCGGGTGGATCTTACGGAGCCACGGCGGCCAGTGCAGCGGTGGCGGCCACGGCCAATGGCTATGCACCTGGCCCCAACATGGGCACCCTTTCCTCGTCGCCCGGCAGCGTCTTCAACTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCACCATCACGCAGCCACTGCCCACCCGCACCACTACCCACATCCCCACCAGCCGTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGCCGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAASAAVAATANGYAPGPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHAATAHPHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00917856;
- 90% Identity
- iTF_00916928;
- 80% Identity
- iTF_00565119;