Dcol005374.4
Basic Information
- Insect
- Drosophila colorata
- Gene Symbol
- kn
- Assembly
- GCA_035041545.1
- Location
- JAWNLD010000272.1:2636327-2639524[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-119 9e-116 387.4 0.0 205 384 1 209 1 213 0.99 2 2 1.5e-06 0.0038 15.5 14.9 424 516 216 308 210 330 0.56
Sequence Information
- Coding Sequence
- ATGAGGAGATTTCAGGTCGTCATCTCCACCCAAGTGGCCGTTGATGGACCACTGCTGGCTATCTCGGACAACATGTTCGTGCACAATAATTCGAAGCACGGACGCCGCGCCAAACGACTGGATACAACGGAAGGTACAGGCAATACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTACCCACCGCTGCCAGTGGCCACGCCCTGTATCAAGGCGATATCGCCCAGCGAGGGCTGGACCACAGGTGGCGCCACCGTCATCATCGTGGGCGACAACTTCTTCGACGGCCTGCAGGTGGTTTTCGGCACCATGCTCGTGTGGAGCGAGCTGATCACATCGCACGCGATACGGGTCCAGACCCCACCGCGCCACATACCCGGCGTGGTCGAGGTGACGCTCTCCTACAAGAGCAAGCAGTTCTGCAAGGGCTCGCCCGGCCGCTTCGTCTATGTCTCAGCACTCAACGAACCCACAATCGACTACGGCTTCCAGCGACTGCAGAAGCTGATACCCCGGCATCCCGGCGATCCGGAGAAGCTGCAAAAGGAAATCATCCTAAAGCGCGCCGCCGATCTCGTCGAGGCGCTCTACTCTATGCCCAGCAGATCGCCCGGCGGCTCCACCAGCTTCAACTCATACGCAGGCCAGCTGGCGGTTAGCGTCCAGGACGGCACTGGCCAGTGGACCGAGGATGACTACCAGCGCGCCCAGTCGAGCAGCGTCAGTCCACGCGGCGGCTactgcagcagcgcctccaCGCCGCACAGCTCGGGCGGCTCCTACGGCGCCACAGCAACCACCGCCGCCGTCGCAGCCACTGCGAACGGATACGCGCCCGCTCCGAACATGGGCACGCTGTCCTCGTCGCCGGGCAGCGTTTTCAACTCCACGTCAATGTCCGTGTCGTCGCCTTGGCATTCGGCCCTCGTGCAGCACCACCACGCCGCCGCCACCCACCCACACCActatccgcatccgcatcagcCCTGGCACAATCCTGCCGTGTCCGCGGCGACAGCGGCGGCTGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSVSSPWHSALVQHHHAAATHPHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00917856;
- 90% Identity
- iTF_00917856;
- 80% Identity
- iTF_00495601;