Damb014899.1
Basic Information
- Insect
- Drosophila ambigua
- Gene Symbol
- kn
- Assembly
- GCA_018150905.1
- Location
- JAECWS010000095.1:8656022-8658119[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-119 7.9e-116 387.4 0.0 205 384 1 209 1 213 0.99 2 2 2.1e-08 0.00016 19.9 15.2 422 523 214 315 209 331 0.72
Sequence Information
- Coding Sequence
- ATGCGCAGATTCCAGGTGGTCATCTCGACACAGGTGGCCGTGGACGGACCGCTGCTGGCCATCTCCGACAACATGTTCGTGCACAACAATTCGAAGCACGGGCGGAGGGCCAAGCGGCTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCGCCCCTGCCGGTGGCCACGCCCTGCATCAAGGCCATCTCACCGAGCGAGGGCTGGACAACTGGCGGCGCCACCGTCATCATTGTGGGCGATAACTTCTTCGATGGGCTGCAGGTGGTGTTCGGGACGATGCTAGTGTGGAGCGAGCTGATCACCTCGCACGCCATCCGCGTCCAGACCCCGCCCAGGCATATACCCGGCGTCGTGGAGGTGACGCTCTCCTACAAGAGCAAGCAGTTCTGCAAGGGATCGCCCGGACGCTTCGTCTATGTCTCAGCTCTCAACGAACCCACAATCGACTACGGATTCCAGCGCCTGCAGAAGCTCATACCACGCCATCCCGGCGATCCGGAGAAGCTGCAGAAGGAGATAATTTTGAAGCGGGCCGCCGACCTGGTCGAGGCTCTCTACTCTATGCCCAGCAGATCTCCGGGCGGCTCCACCGGCTTCAACTCCTACGCCGGACAGCTGGCTGTCAGCGTCCAAGACGGCACCGGCCAGTGGACCGAGGACGACTACCAGCGCGCCCAGTCGAGCAGCGTGAGTCCACGCGGCGGCTACTGCAGCAGCGCCTCCACACCGCACAGCTCGGGCGGCTCCTACGGCACCTCGGCCACCACGGCAGCGGTGGCAGCCACGGCCAACGGCTATGCGCCCACACCCAACATGGGCACGCTCTCCTCCTCGCCGGGCAGCGTCTTCAACTCCACATCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCATCATCATGTGGCCGCCGCCCATCCGCATCACTATCCGCATCCCCACCAGCCGTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGCCGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGTSATTAAVAATANGYAPTPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHVAAAHPHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00917856;
- 90% Identity
- iTF_00484185;
- 80% Identity
- iTF_00474249;