Lclr000804.1
Basic Information
- Insect
- Lordiphosa clarofinis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018904275.1
- Location
- JAEIGQ010000023.1:1710545-1730599[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-13 1.3e-09 37.6 0.0 1 45 267 312 267 312 0.92 2 2 6.3e-19 1.5e-15 56.7 0.0 1 43 655 698 655 700 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACATTATCAGGAGCAACTGACGCGCACCCAATTGAATATCGCGGAGCAATACGGCAGCAGCCAGTGTAAACCACAGAACCACCGTCTAGACCAGCCCAACGTTTCACTTTGCAACGGCACGCTGCAGTTTGAGGAAGATTTTGATAACAACAACCAAACATCACACGATTCAAGTGCAACATCACTATCACGTACACCAACACCATCACCACCGCCAGAGCCCAACGATTGGATACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTGAACGCCCAAGGCGAATTGGTGGCCGAAACGGCGCTGGCGGCCAGCAGCCACATTCAATACAACGGCGGCATTGTGCCGCAGCACGACACTGACAGTGACAACTCGAGCGCATCACTGCACAACAACAACAACAACAGCAAGAGCAGAGCAGCCTCTCAAGAACTTTACAAGCTGCTCACCCAACAGGCAGCCAAAATGACATCAATGGACTCCATGGCCGCACAGATGGCACAATTCTCACTGCTGACCGATACCAATCAGATCTACTCGCTGGTCAATCAACAGAATGCTAACTCGGTAACGCCAACTACCTCAGAAGATACTTCTGCCGCTGCAATCAGTCCCACACTCAAAGATACGCCCAGTCCCAGTGCAGACGCTCCACTGGATCTTAGCAGCAAGCCATCGCCCAACTCATCAATTAGCGGCGATGTCAAGTCCATCAGGGCGCTCTCCGACCGTGCCACGCCCATTCCCTCAGCTCGACGCACCTACAGCGAAGAGGATCTAAATAGGGCGCTGCAAGATGTGCTGGCCAATAAATTGGGCACACGCAAAGCAGCCAGCCAATACCATGTGCCGCGCTCCACACTGCGTAATAAGCTATACAAGATCACCCTGGACGCCAAGCGTATGAATGCTCGAACGCCACCCGTACTGCAACAATTGCAGCGTGAACTGGAACTGGACGAGCAGGATGATTCAGATGGCGAAGAGGGTGAAGGTGATAGCAATACCTCAACACCAGCACCGGCCTTCCAAGAGCTGGCCCAGCGCATTGCGGAGAACAATGGCAGCGATTTGGGTGATGATCTGGAGACAGGAAACATTTCGCCAAAATTGCCCAGGGTGCAGGGTAGCAGCAGTGCAGCTGCTGCTGTTGCGGCGGCTGCTTCGGCCGCTGCGGCGACCGCCTCTGGACTGCCCATGGCCTTTGATGCCAATTTCCTGCTGCAAACTCTCGTGCTCGCAGCAGGGATTGGGGCCATGCCCAAGCTGGATGAGACACAGACCTTGGGGGAGCTGATTAAGACAGTTCTGGTGGCGAACAGCGGAGGTATAATCTCCTCGCTGGATGCCAATGAGCCAGCCGAGGATTCTATCATAAAGATTCCGTCCTTTAAGGCCAGCGGCCCGGCCAGTATCTCGCCTAACATTACCATCAACAACAACAACTCCAACTGCAGCAGCAACCGCAACGGCGGCGAGCGCAGTCCTCACTCCGGCTCCCCCATGCTGGCGGCTGCCGTGGCCGCAGCGGCCAACAACAGCCTGCTCTCGCCCTCATCCAGTTCCATACAGAAGATGATGGCCAGCAATATACAAAGGCAAATCAATGAGCAGAGCAGCCAAGAGGCGGCGGCAACAGCTGTGGCCCTGCGCAACGGCAACACCAGCGGCAGCGAAAACGGTGGCGCCCCCTCGACCAGCAGCTACAAGAAGCCAAGCATATCGGTGGCCAAAATCATTGGCGGCACAGATACCTCACGCTTTGGCGCCTCACCCAATCTGCTGGCCCAACAGCATCATGCCCATCTGCCTGCCCATCATGCAGCCGCCGCCGCCCATGCCCATCAACAGCAGTTGAGCGCCCAGGAGGCGGCCGCCCTGGCTGCGGGCAAGGGCACACGACCCAAGCGAGGCAAGTACCGCAACTATGATCGCGACAGCCTGGTGGAGGCCGTCAAGGCGGTGCAGCGTGGCGAGATGTCGGTGCATCGAGCGGGCAGCTACTACGGAGTGCCCCACTCCACGCTGGAGTACAAGGTCAAGGAGCGACACTTGATGAGGCCACGCAAGCGTGAGCCCAAGCCACAGCCGGATCTGGTGGGTCTGACGGGAGCCGCCAACAAGGTGGGTCTCAATCATCTGGAGAAATTGAAGGCAGCCCAGAACAACAGCGGCGGTGGCAGTGCCAGCTCCAAGCTGAGCAATGCGCTCAAGAACAACAGCCAGGTGGCAGCGGCGGCGGCAGTGGCGGCCAATGGCCTGAAGCTGCCCATGTTCGAGCCCGGCTCGCAGCTGCCCTTCCAGCAGAATATGTTCTGGACGCAGCCGAATACGCCGGCCAACTACGGCCTGGACTTCAACCGCATGGCCGAGGCCATGCGCCATCCCAGCAGCGTTTCCACCAATCATCAGGGTATGCCCATGAATAACGCCCTGGAGTTGGCCGAGAACATGTACGATGGCATCATCCGCAAGACCCTGCAGAACGAAAGCAACCCTGGCAACGGTCATGGCAATGCTCTGCTGGATCAGTTGCTGGTGAAGAGGACACCCCTGCCGTTTACCAATAACCGTAGCAATGACTATGCAGCCGCCTGTTCCAGTGGGGAGAGCATCAAGCGTTCCGGCAGCCCCTTGGGTGCCTATGCGGATATTAAGCGCGAGCGTCTAAGTGGCGATAGTGCCAGCAGTGATGAGGAGCTAGAGCATTCCAACAACAACAACAGCGACCTGGCGCACAACAAGAACAAGAGCAGCAGCAGCAACAACAATGGGAATGGACGCAGCAGCCGCATGACCTCACGGGACTCCGAAACGGATGTCAGCAGCTTAAAGAGCGAACAGTCCCATTGCCACAACAAAATGATGGATCTCAATGGTGGCGGCAGCAGCAGCAGCCTCATCAAATGCGAAACAGAGGCGCCCAGTCCCAGTTCCGTCAGTGGTTCCATACTGCACGAGAAACTGGCCCAGATCAAGGCCGAGCAGCAGCAGTTATAG
- Protein Sequence
- MGRRKWKHYQEQLTRTQLNIAEQYGSSQCKPQNHRLDQPNVSLCNGTLQFEEDFDNNNQTSHDSSATSLSRTPTPSPPPEPNDWIPSDKCNFCVNGRLLTVNAQGELVAETALAASSHIQYNGGIVPQHDTDSDNSSASLHNNNNNSKSRAASQELYKLLTQQAAKMTSMDSMAAQMAQFSLLTDTNQIYSLVNQQNANSVTPTTSEDTSAAAISPTLKDTPSPSADAPLDLSSKPSPNSSISGDVKSIRALSDRATPIPSARRTYSEEDLNRALQDVLANKLGTRKAASQYHVPRSTLRNKLYKITLDAKRMNARTPPVLQQLQRELELDEQDDSDGEEGEGDSNTSTPAPAFQELAQRIAENNGSDLGDDLETGNISPKLPRVQGSSSAAAAVAAAASAAAATASGLPMAFDANFLLQTLVLAAGIGAMPKLDETQTLGELIKTVLVANSGGIISSLDANEPAEDSIIKIPSFKASGPASISPNITINNNNSNCSSNRNGGERSPHSGSPMLAAAVAAAANNSLLSPSSSSIQKMMASNIQRQINEQSSQEAAATAVALRNGNTSGSENGGAPSTSSYKKPSISVAKIIGGTDTSRFGASPNLLAQQHHAHLPAHHAAAAAHAHQQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVGLNHLEKLKAAQNNSGGGSASSKLSNALKNNSQVAAAAAVAANGLKLPMFEPGSQLPFQQNMFWTQPNTPANYGLDFNRMAEAMRHPSSVSTNHQGMPMNNALELAENMYDGIIRKTLQNESNPGNGHGNALLDQLLVKRTPLPFTNNRSNDYAAACSSGESIKRSGSPLGAYADIKRERLSGDSASSDEELEHSNNNNSDLAHNKNKSSSSNNNGNGRSSRMTSRDSETDVSSLKSEQSHCHNKMMDLNGGGSSSSLIKCETEAPSPSSVSGSILHEKLAQIKAEQQQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00919751; iTF_00918001; iTF_00916152; iTF_00914425; iTF_00918972;
- 90% Identity
- iTF_00918001;
- 80% Identity
- -