Lmag025027.1
Basic Information
- Insect
- Lordiphosa magnipectinata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018904285.1
- Location
- JBAMBO010004230.1:963792-988662[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-12 4e-09 36.7 0.0 1 44 271 315 271 316 0.90 2 3 8.9 2.2e+04 -4.0 0.3 6 18 613 627 610 628 0.79 3 3 1e-18 2.4e-15 56.6 0.0 1 43 715 758 715 760 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAAAATTATCAGGAGCAACTGACGCGCACCCAATTGAATATCAAGGAGCAATACAGCAGCAGCCAGTGTAAACCACAAAACCACCGTCTAGACCAGCCCAACGTTTCAATTTGCAACGGCACACTGCAGTTTGAGGAAGATTTTGATAACCACAAACAAACATCACACGATTCAAGTGCAACATCACCATCACTTACCCCAACACCATCACCACCGCCAGAGCCCAACGATTGGATACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTGAACGCCCAAGGCGAATTGGTGGCCGAAACGGCGCTTGCGGCCAGTAGCCACATTCAATACACCGGCGGCATAGTGCCGCAGCACGACACTGACAGTGACAACTCGAGCGCATCactgcacaacaacaacaactgcaacaacagcaacaacaagagcagAGCAGCCTCTCAAGAACTTTACAAGCTGCTCACCCAACAGGCAGCCAAAATGACATCAATGGACTCCATGGCCGCACAGCTGGCACAATTCTCACTGCTGGCCGATACCAATCAGATCTACTCGCTGGTCAATCAACAGAATGCTAACTCGGTAACGCCAACTACCTCAGAAGATACTTCTGCCGCTGCAATCAGTCCCACACTCAAAGAAACGCCCAGTCCCAGTGCAGACGCTCCACTGGATCTTAGCAGCAAGCCATCGCCCAACTCATCAATTAGCGGCGATGTCAAGTCCATCAGGGCGCTCTCCGACTGTGCCACGCCCATTCCCTCAGCTCGACGCACCTACAGCGAAGAGGATTTGAATAGGGCGCTGCAAGATGTGCTGGCCAATAAATTGGGCACACGCAAAGCAGCCAGCCAATACCATGTGCCGCGCTCCACTCTGCGTAATAAGCTGTACAAGATCACCCAGGACGCCAAGCGTATGAATGCTCGAACGCCACCCGTACTGCAACAATTGCAGCGTGAACTGGAGCTGGATGAGCAGGATGATTCAGATGGCGAAGAGGGTGAAGGTGATAGCAATACCTCAACACCAGCACCGGCTTTTCAAGAGCTGGCCCAGCGCATTGCGGAGAACAATGGCAGCGATTTGGGTGATGATCTGGAGACTGGAAACATTTCCCCAAAATTGCCCAGGGTGCAGGGTAGCAGCAATgctgcggcggctgctgctgcagcgGCTGCTTCGGCCGCTGCGGCGACCGCCTCTGGACTGCCCATGGCCTTTGATGCCAATTTCCTGCTGCAAACACTCCTGCTCGCAGCGGGGATTGGTGCCATGCCCAAGCTGGATGAGACTCAGACCTTGGGGGAGCTGATTAAGACAGTGCTAATGGCGAATGGCGGGGGTATAATGTACGAAGCCCTGACCAATACGCTGGCAGCCGGTCATGAGAGCAATGGCAGCAATGCCTCCCTGTtgctgcaacagcagcagcaacaacaacagctaaaTGCAGCCGCCGTTTATCGGCATCGTCTACCAAAGTCTGAAACGCCCGAGACCAGCTCCTCGCTGGATGCCAATGAGCCAGCCGAGGATTCTATCATAAAGATTCCGTCCTTTAAGGCCAGCGGCCCGGCCAGTATCTCGCCCAACATTACcatcaccaacaacaacagctccaACTGCAGCAGCAGTCGCAACGGCGGCGAGCACAGTCCTCACTCCGGCTCCCCCATGCTAGCAGCTGCCGTAGCCGCAGCGGCCAACAACAGCCTGCTCTCGCCCTCATCCAGTTCCATTCAGAAGATGATGGCCAGCAATATACAAAGGCAAATCAATGAGCAGAGCAGCCAagaggcggcggcggcggcggcgacaGCTGTGGCCCTGCGCAACGGCAACACCAGCGGTAGCGAAAACGGTGGCGCCCCCTCGACCAGCAGCTACAAGAAGCCAAGCATATCGGTGGCCAAGATAATCGGCGGCACTGATACCTCTCGTTTTGGCGCCTCACCCAATCTGCTGGCCCAGCAGCATCATGCCCATCTGCCTGCCCATCATGCAGCCGCCGCCGCCCATGCCCATCAACAGCAGTTGAGCGCCCAGGAGGCAGCCGCCCTGGCTGCGGGCAAGGGAACGCGACCCAAGCGAGGCAAGTACCGCAACTATGATCGCGACAGCCTGGTGGAGGCCGTCAAGGCGGTGCAGCGTGGCGAGATGTCGGTGCATCGAGCGGGCAGCTACTACGGAGTGCCCCACTCCACGCTGGAGTACAAGGTCAAGGAGCGACATTTGATGAGGCCGCGCAAGCGTGAGCCCAAGCCACAACCGGATCTGGTGGGTCTAACGGGAGCCGCCAACAAGGTGGGTCTCAATCATCTGGAGAAATTGAAGGCAGCCCAGAACAACAGCGGCAGTGGCAGTGCCAGCTCCAAGCTGAGCAATGCGCTCAAGAGCAACAGCCAggcggcagcggcggcggcagtGGCAGCCAATGGCCTGAAGCTGCCGATGTTTGAGCCCGGCCCGCAGTTGCCCTTCCAGCAGAATATGTTCTGGACGCAGCCGAATACGCCGGCCACTTATGGCCTAGACTTTAACCGCATAACCGAGGCCATGCGCCATCCTGGCAGCGTTACTACCAATCATCAAGGTCTGCCCATGAATAACGCCCTGGAGTTGGAGAATATGTACGATGGCATCATCCGAAAGACCCTGCAGAATGAAAGCAACCCTGGCAATGGTCATGGCAATGCTCTGCTCGATCAGTTGCTGGTGAAGAGGACACCCCTGCCGTTTACCAATAACCGTAGTAATGACTATGCAGCCGCCTGTTCCAGTGGGGAGAGCTTTAAGCGTTCCGGCAGCCCCTTGGGTGCCTACGCGGACATTAAGCGAGAGCGTCTAAGTGGCGATAGTGCCAGCAGTGATGAGGAGCTAGAGCAttccaacaacaataacagcgaCCTGGCGCACAACAAAAacaagagcagcagcagcaccaacaaTGGGAACGGACGCAACAGCCGCATGACCTCACGGGACTCCGAAACGGATGTCAGCAGCTTAAAGAGCGAACAGTCCCATTGCCACAACAAAATGATGGATCTCAATGgtggcggcagcagcagcagcctcatCAAATGCGAAACAGAGGCACCCAGTCCCAGTACCGGCAGTGGTTCCATACTGCACGAGAAACTGGCCCAGATCAAGGCCGAGCAGCAGCAGTTATAG
- Protein Sequence
- MGRRKWKNYQEQLTRTQLNIKEQYSSSQCKPQNHRLDQPNVSICNGTLQFEEDFDNHKQTSHDSSATSPSLTPTPSPPPEPNDWIPSDKCNFCVNGRLLTVNAQGELVAETALAASSHIQYTGGIVPQHDTDSDNSSASLHNNNNCNNSNNKSRAASQELYKLLTQQAAKMTSMDSMAAQLAQFSLLADTNQIYSLVNQQNANSVTPTTSEDTSAAAISPTLKETPSPSADAPLDLSSKPSPNSSISGDVKSIRALSDCATPIPSARRTYSEEDLNRALQDVLANKLGTRKAASQYHVPRSTLRNKLYKITQDAKRMNARTPPVLQQLQRELELDEQDDSDGEEGEGDSNTSTPAPAFQELAQRIAENNGSDLGDDLETGNISPKLPRVQGSSNAAAAAAAAAASAAAATASGLPMAFDANFLLQTLLLAAGIGAMPKLDETQTLGELIKTVLMANGGGIMYEALTNTLAAGHESNGSNASLLLQQQQQQQQLNAAAVYRHRLPKSETPETSSSLDANEPAEDSIIKIPSFKASGPASISPNITITNNNSSNCSSSRNGGEHSPHSGSPMLAAAVAAAANNSLLSPSSSSIQKMMASNIQRQINEQSSQEAAAAAATAVALRNGNTSGSENGGAPSTSSYKKPSISVAKIIGGTDTSRFGASPNLLAQQHHAHLPAHHAAAAAHAHQQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVGLNHLEKLKAAQNNSGSGSASSKLSNALKSNSQAAAAAAVAANGLKLPMFEPGPQLPFQQNMFWTQPNTPATYGLDFNRITEAMRHPGSVTTNHQGLPMNNALELENMYDGIIRKTLQNESNPGNGHGNALLDQLLVKRTPLPFTNNRSNDYAAACSSGESFKRSGSPLGAYADIKRERLSGDSASSDEELEHSNNNNSDLAHNKNKSSSSTNNGNGRNSRMTSRDSETDVSSLKSEQSHCHNKMMDLNGGGSSSSLIKCETEAPSPSTGSGSILHEKLAQIKAEQQQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00915255;
- 90% Identity
- iTF_00919751; iTF_00915255;
- 80% Identity
- -