Lmom013899.1
Basic Information
- Insect
- Lordiphosa mommai
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018904225.1
- Location
- JAEIFT010000068.1:205409-224039[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.4e-13 1.2e-09 37.7 0.0 1 45 302 347 302 347 0.92 2 3 2 4.7e+03 -2.6 0.1 4 15 519 532 518 533 0.82 3 3 6e-19 1.4e-15 56.8 0.0 1 43 619 662 619 664 0.95
Sequence Information
- Coding Sequence
- ATGCAATTTTTAATAGCACACTTTGCAAGCTTAGAACGCGTTGCTGAAGAATTTATGGGTCGCAGGAAATGGAAACATTATCAAGAGCAACTGACGCGCACCCAATTGAATATCGCCATCAGCCCAGAGGCGGAGCAATACAACAGCAGCCAGTGTAAACCACAGAACCACCGTCTAGACAAGCCCAACGTTTCACAATTCAACGGCATATTGCAGTTTGAGGAAGATTTTGATAACAACAACCAAACATCACAGGATTCAAGTGCAACATCACCATCACGTACACCAACACCATCACCACCGCCAGAACCCAACGATTGGATACCTTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCCTGCTAACGGTGAACGCCCAAGGCGAATTGGTGGCCGAAACGGCGCTTGCGGCCAGTAGCCACATTCAATACAACGGCAGCATAGTGCCGCAGCACGACACTGACAGTGACAACTCGAGCGCATCACTGCACAACACAAGCAACAACAACAACAACAGCAGCAACAAGAGTAGAGCACGCCAAGCCGCATCCACAACTTCTCAAGAACTTTATAGGCTGCTCACCCAACAGGTGACATCCACAATGACATCAATGGACTCCATGGCCGCACAGCTGGCACAATTCTCACTGCTGGCCGATTTCAATCAAATCTACTCGCTGGCCAATCAACAGAATGCTAACTCGGTAACGCCAACTACCTCAGAAGATACTTCTGCCGCTGCAATCAGTCCCACACTCAAAGATACGCCCAGTCCCAGTGCAGATGCTCCACTGGATCTTAGCAGCAAACCATCGCCAAACTCATCAATTAGCGGCGATGTCAAGTCCATCAGGGCGCTCTCCGACTGTGCCACGCCCATTCCCTCAGCTCGACGCAGCTACAGCGAAGAGGATCTAAATCGGGCGCTGCAAGATGTGCTGGCCAATAAACTGGGCACACGCAAAGCGGCCAGCCAATACCATGTGCCGCGCTCCACACTGCGTAACAAGCTCTACAAGATCACGCTGGACGCCAAGCGTCTGAATGCCCGAACGCCACCCGTGCTGCAACAATTGCAGCATGAACTGGAGCTGGACGAGCAGGATGATTCCGAGGGCGATGAGGTGGAAGGCGATAGTAATGCCTCAACACCAGCACCGGCCTATCAAGAGCTTAAAAATGGCAGCGATTTGGGCGATGATCATCTGGAGACTGGTAACATTTCGCCAAAATTGCTGAGAGTGCAGGGTAGCAGCAGTGCTGCGGCTGCTGCTGCGGCTGCGGCAGCTTCGGCCGCTGCGGTATCCGCCTCTGGCCTGCCCATGGCCATTGATGCCAATGTCCTGCTGCATACACTCATGCTGGCGGCGGGAATTGGTGTAATGCCCAAGCTGGATGAGACACAGACTTTGGGGGAGCTGATTAAAACATTGCTGGTGGCCAATACCGCTGCCGTGGCCGCTGCGGCCAACAATAGCCTGCTCTCGCCCTCATCCTCGTCCATACAGAAGATGATGGCCAGCAATATACAAAGGCAAATCAATGAGCAGAGCAACCTGGAGGCGGCTGTGACAGCTGTGGCTCTGCGCAATGGCAACAGCGAAAACGGTGGCGCCCCCTCGACCAGCAGCAGCAGCAGCTACAAAAAACCCAGCATATCGGTGGCAAAAATGATTGGCGGCACAGATACCTCACGCTTTGGCGCCTCACCGAATCTGCTGGCCCAGCAGCATCATGTCCAGCATCTGCCCAACCATCATGCAGCCCACCAGCAACAGCTGAGCGCCCAGGAGGCGGCCGCCTTGGCCGCGGGCAAGGGAACACGTCCCAAACGGGGCAAGTACCGCAACTATGATCGCGACAGCCTGGTGGAGGCCGTCAAGGCCGTGCAACGTGGTGAGATGTCCGTGCATCGAGCGGGCAGCTACTATGGAGTGCCACACTCCACGCTGGAGTATAAGGTCAAGGAGCGGCATTTGATGAGGCCGCGCAAGCGCGAACCCAAGCCGCAACCGGATCTGGTGGGTCTAACGGGAGCGGCCAATAAAGTGGGTCTTAATCATCTGGAGAAACTGAAGGCAGCCCAGAGTGGCAACAGTGGCAGCAGCTCCAAGCTGAGCCATGCGCTCAAGAACAACAGTCAGGTGTCAGCATCGGCATCAGCGGCGGCAGCAGTGGCAGCCAATGGCATGAAGCTGCCCCTATTTGAGCCCAGTCCACAGATGTCCTTCCAGCCAAATATGTTCTGGCCGCAGCCGAATACAACGCCGGGTAGCTATGGACTGGATTTTAATCGTATGGCCGAGGCCATGCGCAATCCCACCAATCATCATGGTGTACCCATTAAAAGCGCCCTGGAGCTGGCCGAGAATATGTACGATGGCATTATACGCAAAACCCTGCAAAATGAAGGCAACCCAGTAGTGGCCAGCACTAATCCCGGCAATGGTCATGGCAATGCTCTGCTTGATCAGTTGCTGGTGAAGAGAACACCCCTGCCGTTTACCAATAATCGTAGCAATGACTATGCCGCTGCCTGTTCCAGTGCGGAGAGTATTAAGCGTTCCGGCAGCCCTTTGGGCAACTATGCGGATATCAAGCGGGAGCGTCTCAGCGGGGACAGTGCCAGCAGTGATGAGGAGCTAGAGGAGCATTCCAATAATAACAATAACAGTGATCTGGCGCATAACAAAAACAAAAGCCACAACAACAATGGGAACGGACGCAGCCGTATGACCTCCAGGGATTCCGAAACGGATGTCAGCAGCTTAAAGAGCGAGCAATCCCATAGCCACCACAACAAAATGATGGATCTCAATGGCAGCAACAGCAGCCTAATGAAATGCGAAACGGAGGCACCCAGTCCCAGTCACGGCACTAGTTCCATTCTACACGAGAAACTGGCCCAAATCAAGGCCGAGCAGGAACAGTTATAG
- Protein Sequence
- MQFLIAHFASLERVAEEFMGRRKWKHYQEQLTRTQLNIAISPEAEQYNSSQCKPQNHRLDKPNVSQFNGILQFEEDFDNNNQTSQDSSATSPSRTPTPSPPPEPNDWIPSDKCNFCVNGRLLTVNAQGELVAETALAASSHIQYNGSIVPQHDTDSDNSSASLHNTSNNNNNSSNKSRARQAASTTSQELYRLLTQQVTSTMTSMDSMAAQLAQFSLLADFNQIYSLANQQNANSVTPTTSEDTSAAAISPTLKDTPSPSADAPLDLSSKPSPNSSISGDVKSIRALSDCATPIPSARRSYSEEDLNRALQDVLANKLGTRKAASQYHVPRSTLRNKLYKITLDAKRLNARTPPVLQQLQHELELDEQDDSEGDEVEGDSNASTPAPAYQELKNGSDLGDDHLETGNISPKLLRVQGSSSAAAAAAAAAASAAAVSASGLPMAIDANVLLHTLMLAAGIGVMPKLDETQTLGELIKTLLVANTAAVAAAANNSLLSPSSSSIQKMMASNIQRQINEQSNLEAAVTAVALRNGNSENGGAPSTSSSSSYKKPSISVAKMIGGTDTSRFGASPNLLAQQHHVQHLPNHHAAHQQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVGLNHLEKLKAAQSGNSGSSSKLSHALKNNSQVSASASAAAAVAANGMKLPLFEPSPQMSFQPNMFWPQPNTTPGSYGLDFNRMAEAMRNPTNHHGVPIKSALELAENMYDGIIRKTLQNEGNPVVASTNPGNGHGNALLDQLLVKRTPLPFTNNRSNDYAAACSSAESIKRSGSPLGNYADIKRERLSGDSASSDEELEEHSNNNNNSDLAHNKNKSHNNNGNGRSRMTSRDSETDVSSLKSEQSHSHHNKMMDLNGSNSSLMKCETEAPSPSHGTSSILHEKLAQIKAEQEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00915255;
- 90% Identity
- -
- 80% Identity
- -