Lcra014505.1
Basic Information
- Insect
- Lochmaea crataegi
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_947563755.1
- Location
- OX387428.1:943732-945843[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.88 2.4e+04 -3.5 0.7 78 103 48 73 17 91 0.47 2 2 4.4e-103 1.2e-98 330.9 8.4 1 218 180 388 180 388 0.94
Sequence Information
- Coding Sequence
- ATGGCATCATCATCATCGTCATCATCACCATCCCCATCAATCATGTCCAACAACCAAATTGAATCATCGAAAACAACCATCGACCAACCACTCATCGCATCCGACCAAAACGGTTCAATATCCGACCAAAATAAACTGGTAGCATCCCTTAAGGACGTCAATGAACCTTCAAGTACAAATAATACTGAAGAGCCGAAATCAAACAATAAAGCAATAGATGTAGATGGAGAAGAAGATTCAGCTACGGAAAGCTTACCTCCAACTGAAGAAATGATCGAAGAACCTCACGATAGATCGGATGGTTCCGATTCCGGACTCGGTTCGGAACTAAGTGAAGAACGACCATTAGAAATAGCTGCTAATATAGAAAGTTATAGCGAATCTTCTTTTTTATACAATACTATTAATAATACGCAATTCGAAGAATTCACTTCTTCCGGAGTCAATATATTGGGCGAAACACAATCTAAACGTAAAGAAATTAAAAGCAATCTTAAACGTAAACTTTGTACAGACGAAAACGAAGAACCGAAGACGAAAAAAAGAAAAGGTATCACCTTCGATAGCGTCACAGTTTTTTATTTCCCCAGATCGCAAGGATTCACCTGCGTACCTTCTCAAGGAGGATCTACTTTAGGTATGGGAACGTCCCATTCTTTCGTCAAAAAATTCTCCATAGCCGAACACGCCGTGGAACAGCGAAGAATACACAGACAGCTTCTTCAGCAACTTAGATCGGAAAGAAACGTATCTGCAGGTGCAGCTACTTCTAGCGAAGATTCCGACAGCGAAGATGAAGCTAGCGAAGCATCAGACACGGAAATGGATCCTGATAATTACTATTTTCTTCAACCCGTACCTACGAGGCAACGGAGAGCGTTGTTGAGGGCTGCTGGAGTGAGAAAAATCGATTCTATCGAAAAAGATGAATGTAGAAGTATTAGAACGTCTCGGGAATTTTGCGGTTGTGGCTGCAAAGGTTACTGTGATCCAGATACTTGTTCTTGCAGCCAAGCAGGGATCAAATGCCAAGTTGATAGACTTAATTTTCCATGTGGATGTTCCAGAGATAATTGCGGAAATTCCAGCGGAAGAATCGAGTTTAATCCTGTTAGAGTGAGGACGCATTTTATACATACGCTTATGAGATTAGAATTAGAAAAAGAAAAAGAAGGTAAAACGGAAAATAAGGATGTTGTTACGCAGCAAAATTGGATGGACAACGAGAGACTTTCAGCACCAACGGATCAGGACCAAACTTCTTCAAAAAACCCCGTTAGTAAATATAACAGTAATTTATTAAGAGACGTCACTCTGTCCGCCAATGTTGAAGCTGAAAATTGTGTCCACACCGGAAGCTTTACGAATTTACATTATGGTGCACCCGGAGAAGGACCTGGGAACCACCTACCAGATCGAGCCGATTCTTTGGATCTCTACACCTTCAGAGAAAACTGTTATGGAGAAGAAGGCAGCCACGAAGAGCGTAAACAGCCTTTCCACAGCCAAGCTTTCCACTTTTCCAACGTCGGTTTCGGCAACTACGTTCCTGGTCACCAAAATCAATACCCTCAGCCCTATCAACAGAGCTTTAGCGAATTTCCACCGATTTTCACACCGTACGGAGGCATGTACGTGCCGGAGTTTAACCAGAAACCCGCAGATGGCGCCTTTCACCAGAATTACGAAACCTTCAATGCCGATACTTTTCCGGAAAGCAAGGAAAATCAGTATACAAATCTGAACCCGGTAGGTGGAAACAACAAGATCGAATCCTTTTCGGAATTATTAAATGGGAGATTCAATAGTTATCCTAATTATGAAGGAGAATTTAGCAGTAATTTAAATTCGGAATGTCCCGGAAATGGTTTGGTGGTAAAGAACAGCGAAAATTCGACCAATAGTAACACCAGTCATTCGGAGGAATGCGATGAAAATTTCGGAGAAATTATTAAAAAATCGATGGTAGAAACAGTTTCTGCATAA
- Protein Sequence
- MASSSSSSSPSPSIMSNNQIESSKTTIDQPLIASDQNGSISDQNKLVASLKDVNEPSSTNNTEEPKSNNKAIDVDGEEDSATESLPPTEEMIEEPHDRSDGSDSGLGSELSEERPLEIAANIESYSESSFLYNTINNTQFEEFTSSGVNILGETQSKRKEIKSNLKRKLCTDENEEPKTKKRKGITFDSVTVFYFPRSQGFTCVPSQGGSTLGMGTSHSFVKKFSIAEHAVEQRRIHRQLLQQLRSERNVSAGAATSSEDSDSEDEASEASDTEMDPDNYYFLQPVPTRQRRALLRAAGVRKIDSIEKDECRSIRTSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKEKEGKTENKDVVTQQNWMDNERLSAPTDQDQTSSKNPVSKYNSNLLRDVTLSANVEAENCVHTGSFTNLHYGAPGEGPGNHLPDRADSLDLYTFRENCYGEEGSHEERKQPFHSQAFHFSNVGFGNYVPGHQNQYPQPYQQSFSEFPPIFTPYGGMYVPEFNQKPADGAFHQNYETFNADTFPESKENQYTNLNPVGGNNKIESFSELLNGRFNSYPNYEGEFSSNLNSECPGNGLVVKNSENSTNSNTSHSEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00735556; iTF_00458917; iTF_00910739;
- 90% Identity
- iTF_00910739;
- 80% Identity
- -