Gnym022589.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- CSRNP3
- Assembly
- GCA_963978555.1
- Location
- OZ021712.1:373289-375332[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.29 1.2e+04 -2.9 0.3 63 75 40 52 6 92 0.47 2 2 1.3e-102 5.5e-98 328.4 9.3 1 218 165 373 165 373 0.93
Sequence Information
- Coding Sequence
- ATGGGATCTAACAGTTCAACAACTACAATggcatcatcatcatcatcatccccTTCTTCGATAATGCCCAACAACCAAATTGAATCATCGAAATTAACCATCGACCAATCACTCATAACATCCGACCAAAACGATTCAACTTCCGACCAAAATAAACTGGTAGTATCCCTTCCGGACGTCAATGAACCTTCGAGTACAAATATTACTGAAGAGCCGAAATCAAACAATAAAGCAATAGATGTAGATGGAGAGGATTCAGCTACAGAAAGCTTGCCTCCAACTGAAGAAATGATCGAAGAACCTCACGATAGATCGGACGGTTCGGATTCCGGACTCGGTTCAGAACAAGAAATAGCTGCTAATATAGAAAGTTTTAGcgaatcttcttttttatacGACGAAGTATTAGGCGAAACACAATCgaaatttaaagaaattaaaagcAATCTTAAACGTAAGCTTTGTACAGACGAAAACGAAGAACCCAAAGCGAAAAAAAGGAAAGGCATCACCTTTGACAGCGTCACAGTTTTTTATTTCCCAAGATCGCAAGGATTCACCTGCGTACCTTCTCAAGGAGGTTCTACTTTAGGTATGGGAGCATCCCATTGTTTCGTCAAAAAATTCTCCATAGCCGAACACGCTGTGGAACAAAGAAGAATTCACAGACAACTCCTTCAGCAACTTAGATCCGAAAGAAACTTATCCACAGGTGCAGCTACGTCTAGCGAAGATTCTGATAGTGAAGATGAAGCTAGTGAAGCTTCAGATACGGAAATGGACCcggataattattattttctccaACCTGTACCAACGAGGCAACGGAGAGCGTTGCTGAGAGCTGCTGGAGTCAGAAAAATCGATTCTATTGAAAAAGATGAATGTAGGAGTATTAGAACGTCTCGCGAATTTTGCGGTTGTGGCTGTAAAGGTTACTGTGATCCGGATACTTGCTCTTGCAGCCAAGCTGGTATCAAATGCCAAGTTGATAGACTAAATTTTCCATGTGGATGTTCCAGGGATAATTGTGGAAATTCCAGCGGAAGAATCGAGTTTAATCCTGTTCGAGTCAGGACGCATTTTATACATACGCTTATGAGaTTAGAATTAGAAAAAGAGAAGGAAagtaaaattgataataataaggaTGTTGTAACACAACAAAATTGGATGGAAAACGAGAGACTTTCAGCACCAACAGATCAGGACCAAACTTCTTCGAAAAACCCCATTAGTAAATATAACAGTAATTTGTTAAGGGATGTCACACTATCCGCCAACGTTGAAGCTGAAAATTGTGTCCATACCGGAAGTTTTACGAATTTACATTATGGAGCGCCTGGAGAAGGTCCTGGAAACCACCTACCAGATAGAGCAGATTCTTTGGACCTCTACACCGTCAGAGAAAACTGTTACGGAGAAGAAAGCAGTAAACAGGCTTTCCACAGCCAAGCTTTTCACTTTTCCAACGTCGGATTCGGCAATTACGTTCCTGGACATCAAAATCAATACCCTCAACCCTATCAACAAAGCTTTAGCGAATTTCCACCGATGTTCACCCCGTACGGAGGCATGTACGTGCCGGAGTTTAACCAGAAACCTCTAGATGGCGCCTTTCACCAGAACTACGAAAATTTCAATGCTGATACTTTTCCCGAAAGCAAGGAAAATCAGTATACAAATCTGAACCCAGTAGGTGGAAACAACAAGATCGAATCTTTTTCGGAATTATTGAATGGTAGATTCAATTCTTATCCTAGTTATGAAGGAGAATTTAGCAGTAATTTGAATTTGGAATGTCCTGGAAATGGTTTGGTGAAAAGCATCGACAATTCGACCAACAGTAACAGTCATTCAGAAGAATGCGACGAAAATTTTggagaaattattaaaaaatccaTTGTAGAAACAGTTTCTGcataa
- Protein Sequence
- MGSNSSTTTMASSSSSSPSSIMPNNQIESSKLTIDQSLITSDQNDSTSDQNKLVVSLPDVNEPSSTNITEEPKSNNKAIDVDGEDSATESLPPTEEMIEEPHDRSDGSDSGLGSEQEIAANIESFSESSFLYDEVLGETQSKFKEIKSNLKRKLCTDENEEPKAKKRKGITFDSVTVFYFPRSQGFTCVPSQGGSTLGMGASHCFVKKFSIAEHAVEQRRIHRQLLQQLRSERNLSTGAATSSEDSDSEDEASEASDTEMDPDNYYFLQPVPTRQRRALLRAAGVRKIDSIEKDECRSIRTSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKEKESKIDNNKDVVTQQNWMENERLSAPTDQDQTSSKNPISKYNSNLLRDVTLSANVEAENCVHTGSFTNLHYGAPGEGPGNHLPDRADSLDLYTVRENCYGEESSKQAFHSQAFHFSNVGFGNYVPGHQNQYPQPYQQSFSEFPPMFTPYGGMYVPEFNQKPLDGAFHQNYENFNADTFPESKENQYTNLNPVGGNNKIESFSELLNGRFNSYPSYEGEFSSNLNLECPGNGLVKSIDNSTNSNSHSEECDENFGEIIKKSIVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00911944;
- 90% Identity
- -
- 80% Identity
- -