Dcar009859.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- CSRNP3
- Assembly
- GCA_029229535.1
- Location
- CM055256.1:19585899-19590042[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.52 1.3e+04 -3.7 1.0 84 103 56 75 26 93 0.48 2 2 1.8e-103 4.7e-99 331.2 8.2 1 218 174 382 174 382 0.93
Sequence Information
- Coding Sequence
- ATGGGATCTAACAGTTCGACGACCATGGCTTCATCATTATCACCAATTTCATCAGACATGTCGTACCAAATCGGTACGAACGAATCATCGAAATCAACCATCGACCAACTACTCATCGCAACCGACCAAAATTTAGAAGGCATCGAACAGCCTTCGAGTACAAATATTGAAGAGCCGAAATCAAACAATAATCAAGCTatagattataaaaatgaaGACGAGGAAGATTCTGCGACGGAAAGTCTCCCACCAACTGAAGAACCCCATGACCGATCGGACGGATCAGATTCCGGACTCGGTTCGGAGCTGAACGAAGAACGGCCCTTAGAAACGACCGCGAATATAGAAAATTTCCACGAAACTTCATTTTTGTGCAATGCGCAGTTCGAGGAATTCGCTAGACAAGTGACTTCATCGGGCGTGAACGTTTTAAGCGAACCGCAATCgcaaaagaaagaaataaaaagcaaTCTCAAACGTAAATTATGCACCGAAGAACAAATCGAAGAACCGGAAGCGAAAAAAAGAAAAGGCATCACCTTCGACAGCGTCACCGTCTTTTATTTCCCCCGAGCTCAAGGTTTCACTTGCGTACCTTCCCAAGGAGGGTCCACTTTAGGCATGGGCGCTTCCCATACCTACGTCAAGAAATTCTCCATAGCAGAACACGCGGTAGAACAAAGAAGAATCCACAGACAGCTCCTCCAGCAGCTCAGATCAGAACGGAACCTTTCCGTCGGCGCGGCCACCTCTAGCGAGGAATCCGACAGCGAAGACGAAGCGAGCGAAACCTCCGACACCGAAATGGATCCGGATAATTATTACTTCCTCCAACCAGTGCCTACTAGACAGAGGAGAGCCTTGTTGAGAGCCGCTGGTGTGCGCAAAATTGATTCCGTGGAAAAAGACGaatgtaaaaatattagaaCGTCTCGGGAATTTTGCGGATGCGGATGTAAAGGTTATTGCGATCCGGATACTTGTTCTTGTAGCCAAGCGGGAATCAAATGTCAAGTTGACAGACTTAATTTTCCTTGTGGGTGTTCCAGAGATAATTGTGGCAATTCCAGCGGCAGGATTGAATTTAATCCGGTAAGAGTGAGGACGCATTTCATTCATACGCTTATGAGGTTAGAAttagaaaaggaaaaagaaggcaaaactgaaaataaaatggtTCGGGTTCAACAAAATTGGATGGATAACGAAAGATTATCATCCACGCCTGCACAAGACCAAACTACTTCTAAAAACCCCGTTAGCAAATATAACAGTAGTTTATTAAGGGATGTTACTTTATCTGCAAACGTGGAAGCTGAAAATTGTGTCCATACAGGGAGATTCACGAATTTACACTACGGAGCACCGGGGGAAGGACCCGGGAATCATCTACCAGATCGAGGTGATTCTTTGGACCTTTATACTTTCagagAAAATTGTTACGGCGAAGAATCTAACCAAGAAGAACGAAAACAGTCTTTTCATAATCAatctttccatttttctaaCGTCGGTTTCGGCAACTACGTCCCTGGCCATCAGAATCAATACCCCCAACCATATCAACAGAGCTTTAGCGATTTCCCTCCGATATTCAGCGCCCCCTACTCAGGTATGTACGTGCCGGAATTCAACCAGAAACCCGTAGATGTCGCCTTTCAacaaaattacgaaaatttcaAAGCCCATAATGTTCCGGAAAGCAAAGAAAATCAATACACCAATTTGAATGCGGTCAGCGGGGGAAATACCAAAATTGAATCTTTTTCCGATTTGTTGAACGGAAGATATAATAGTTATCCGAGCTACGAGGGGGAGTTCAATGGTAATTTGAATTTGGATAGTCCCGTAGTAGAGAAAAACGGGGAAAATTCGACCAACGGCAGCGCTACCGAGGAATGCGATGAAAATTTCggggaaattattaaaaaatccaTGGTAGAAACTGTTTCAGCATAA
- Protein Sequence
- MGSNSSTTMASSLSPISSDMSYQIGTNESSKSTIDQLLIATDQNLEGIEQPSSTNIEEPKSNNNQAIDYKNEDEEDSATESLPPTEEPHDRSDGSDSGLGSELNEERPLETTANIENFHETSFLCNAQFEEFARQVTSSGVNVLSEPQSQKKEIKSNLKRKLCTEEQIEEPEAKKRKGITFDSVTVFYFPRAQGFTCVPSQGGSTLGMGASHTYVKKFSIAEHAVEQRRIHRQLLQQLRSERNLSVGAATSSEESDSEDEASETSDTEMDPDNYYFLQPVPTRQRRALLRAAGVRKIDSVEKDECKNIRTSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKEKEGKTENKMVRVQQNWMDNERLSSTPAQDQTTSKNPVSKYNSSLLRDVTLSANVEAENCVHTGRFTNLHYGAPGEGPGNHLPDRGDSLDLYTFRENCYGEESNQEERKQSFHNQSFHFSNVGFGNYVPGHQNQYPQPYQQSFSDFPPIFSAPYSGMYVPEFNQKPVDVAFQQNYENFKAHNVPESKENQYTNLNAVSGGNTKIESFSDLLNGRYNSYPSYEGEFNGNLNLDSPVVEKNGENSTNGSATEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00911944;
- 90% Identity
- -
- 80% Identity
- -