Lcap028766.1
Basic Information
- Insect
- Lochmaea capreae
- Gene Symbol
- CSRNP3
- Assembly
- GCA_949126875.1
- Location
- OX421403.1:30388762-30391701[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-103 2.5e-98 330.0 9.4 1 218 173 381 173 381 0.94
Sequence Information
- Coding Sequence
- ATGGGATCTAACAGTTCGACCACTACAATggcatcatcatcatcatcaccaTCCCCATCGATCATGTCCAACATCCAAATTGAATCATCGAAAACAACCATCGACCAACCACTCATCGCATCCGACCAAAATAAACTGGTAGCATCCCTTCCGAACGTCAATGAACCTTCAAGTACAAATACTGAAGAGCCGAAACCAAACAATAAAGCAATAGATGTAGATGGAGAAGATTCAGCTACGGAAAGCTTACCTCCAACTGAAGAAATGATCGAAGAACCTCACGATAGATCAGACGGTTCAGATTCCGGACTCGGTTCGGAGCTAAACGAAGAACGACCATCAGAAATGGCTGCTAACATAGAAAGTTATATCAATAATACGCAGTTTGAAGAATTTACCAAACAAGTATCTTCTTCAGGAATCAGTATATTAGGCGAAACACAATCTAAATGTAAAGAAATTAAAAGCAATCTTAAACGTAAACTTTGTACAGACGAAAACGAAGAACCGAAGGCGAAAAAAAGAAAAGGTATCACCTTTGATAGTGTAACAGTGTTTTATTTCCCCCGAGCACAAGGATTCACCTGCGTACCGTCTCAAGGAGGTTCTACTTTAGGTATGGCAGCGTCCCATTGTTTCATCAAAAAATTCTCCATAGCCGAACATGCAGTGGAACAGAGAAGAATACACAGGCAGCTTCTTCAGCAACTTAGATCGGAAAGAAACGTATCTGCAGGTGCAGCCACTTCTAGCGAAGATTCCGACAGCGAAGATGAAGCTAGCGAAGCATCGGATACGGAAATGGATCCGGATAATTACTATTTTCTTCAACCTGTACCTACGAGGCAACGGAGAGCGTTGTTGAGGGCTGCTGGAGTGAGAAAAATCGATTCTGTCGAAAAAGATGAATGTAGAAGTATTAGAACGTCTCGCGAATTTTGCGGTTGTGGCTGTAAAGGTTACTGTGATCCAGATACTTGTTCTTGCAGCCAAGCCGGAATCAAATGCCAAGTTGATAGACTTAATTTTCCATGTGGATGTTCCAGAGATAATTGTGGAAATTCAAGCGGAAGAATCGAGTTTAATCCTGTTAGAGTGAGGACGCATTTTATACATACGCTTATGAGattagaattagaaaaagaaaaggAAGGTAAAACGGATAATAAGGATGTTGTAATACAGCAAAATTGGATGGACAACGAGAGACTTTCAGCACCAACAGATCAGGACCAAATTTCTCCAAAAAACCCCGTTAGTAAATATAACAGTAATTTATTAAGAGACGTCACTCTGTCCGCCAACGTTGAAGCTGAAAATTGTGTCCATACTGGAAGTTTTACGAATTTACATTATGGTGCGCCTGGAGAGGGACCTGGGAACCACCTGCCAGATCGAGCCGATTCTTTGGATCTCTACACCGTCAGAGAAAATTGTTATGGAGAAGAAGGCAGCCACGAAGAGCGTAAACAGCCTTTCCACAGCCAAGCTTTCCACTTTTCCAACGTCGGTTTCGGCAACTACGTTCCTGCTCATCAAAATCAATACCCCCAACCCTATCAACAGAGCTTTAGCGAATTTCCACCGATGTTCACCCCATACGGAGGCATGTACGTACCGGAGTTTAACCAGAAACCCCTAGATGGCGCCTTTCACCAGAGTTACGAAAATTTCAATGCCGATACTTTTCCGGAAAGCAAGGAAAATCAGTATACAAATTTGAACTCAGTAGGTGGAAACAACAAGATCGAATCCTTTTCGGAGCTATTAAATGGGAGATACAATAGTTATCCTAGTTATGAAGGAGAGTTTAGTAGTAATTTAAATTTGGAATGTCCTGGAAATGGTTTGGTAAAGAGCAGCGACAATTCGACCAATAGTAACACCAGTCATTCGGAAGAATGCGATGAAAATTTTGGGGAGATTATTAAAAAATCCATGGTAGAAACAGTTTCTgcataa
- Protein Sequence
- MGSNSSTTTMASSSSSPSPSIMSNIQIESSKTTIDQPLIASDQNKLVASLPNVNEPSSTNTEEPKPNNKAIDVDGEDSATESLPPTEEMIEEPHDRSDGSDSGLGSELNEERPSEMAANIESYINNTQFEEFTKQVSSSGISILGETQSKCKEIKSNLKRKLCTDENEEPKAKKRKGITFDSVTVFYFPRAQGFTCVPSQGGSTLGMAASHCFIKKFSIAEHAVEQRRIHRQLLQQLRSERNVSAGAATSSEDSDSEDEASEASDTEMDPDNYYFLQPVPTRQRRALLRAAGVRKIDSVEKDECRSIRTSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKEKEGKTDNKDVVIQQNWMDNERLSAPTDQDQISPKNPVSKYNSNLLRDVTLSANVEAENCVHTGSFTNLHYGAPGEGPGNHLPDRADSLDLYTVRENCYGEEGSHEERKQPFHSQAFHFSNVGFGNYVPAHQNQYPQPYQQSFSEFPPMFTPYGGMYVPEFNQKPLDGAFHQSYENFNADTFPESKENQYTNLNSVGGNNKIESFSELLNGRYNSYPSYEGEFSSNLNLECPGNGLVKSSDNSTNSNTSHSEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00911944;
- 90% Identity
- iTF_00911944;
- 80% Identity
- -