Lcra033811.1
Basic Information
- Insect
- Lochmaea crataegi
- Gene Symbol
- TSC22D1
- Assembly
- GCA_947563755.1
- Location
- OX387433.1:26552730-26554761[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.94 5.1e+04 -3.9 0.2 29 45 341 356 338 360 0.52 2 2 3.1e-27 1.7e-22 80.9 2.8 1 47 455 501 455 504 0.96
Sequence Information
- Coding Sequence
- ATGACTGAAACGCCAGAAAAACATGGTGAGCCGATTTTAGAGCCGAACCTTCAAGTATCAGCAGCCCTTGAAGAAGTTCAGCCAATAGCTGGCGAAGTTGCTCCTACTAATAATACTACAAATGTGATACCCACCAGCCCTCAGTATGGTGTGGCCATTATACCCAACTCGGCTACTGCGAATGATCTTGCAACCGAAACCGTCACTCCGCCAACTGAAACATTAACTGATTCGACTGCAAAACCGGCAGATGATAAAGAACTTCATTCCACACCGAGTAGAAATGATAGATTCAAAGTGGTAAAAATTGCTAGTTTAGAACCTTTTAAACGTGGTCGTTGGAAATGTATGGACTATGTTGATGAAGCTCCACCTGTTGGAGCTACAAGAGTACCTCAATCGTCTGGTAGTTTACAATTATCGGGATGTACTTATATGCAAACACAGAGTTTACCACAACAACAATTTCAGCAGATGCTTTTGCAAAGTGGATTTACAAATAGTGCGCCTTTCTTCGCGAATGTTCAACCCCAAATTATGCACCAAGGTCAATATTATTATCCCCAAATAGCGAATGTACAAAATCAAACAATGCAGCAAGTGCCCAACAGCATACCCGCTCAATTTATAGCGAACCAGCCATATTTTCCCGCTGGGGTCGTTCCCAATGCGCAGGGTTTTACAATGCAACAAGGTTATTCTAATGTGCAATACGTTCCAGCTAATCTGATCCAAAATCAAAGTAGTGCTTTTGTACCAACATCACAACCTGTCCAATTACCTCCGAATTTCCAGCAAAGCCAATCGTACGCAGGTCAACCGAATGTATCACAAACGAACGTTCAACCAATTATGAACGGTCATACATTTACTCCACAAAATGAGCAAGTTAGCGGTAGTTTACCCACGCAGACGGTGAAAAGTGTTATAATGAACTCAAATAATACTCAGCCACCGCAAGTCTTACAACAAAACGTGCAAAACGTCCCAGTGCAAAACAATCAGAATATTTTAGTTGCCCAAGGACAACAATACCAGCAACAAAATGCATTCCAACAGAATGCGTCTAATCAACAGCAATCGCTTGCTTCAGTTGTCGTTCCGGTTCAAATCCAACCTGCAACTTCGCAAGTTGCACCTGTGCAATCGCAAACGTTCGATCAAAATTTACCCAACAACGTTTACACGAATCCGCAGTTTGCTGTTAGTGTGAGTAGTTTAACAGTTCTCGAAAATAGTGAAAATCCGACTGAACTAAATGACACTAATAGTGGCGGTAATGTGAATGTAAACGAAAACACGGAGGATCCGGCGAAAACAAACCCCGTAGTCAATGCGATCGATAATAAAATAGAACAAGCTATGGATCTTGTAAAAAGTCATCTTATGTATACCGTTAGAGAAGAAGTGGAAGTATTAAAAGAAAAAATAGCCGAATTAATGGAACGGATCCAGCAATTGGAAAGTGAAAATAATTTTCTTAGATCGCAGATACCCAAGTCGCAAAATCTACCGCCGACTCCGGCGTCTAGCATACAACAATCAAACATAGTCATAAATCCAAATCCCAATTTTCCCGCTAATCCTACGTCAGATACTGCAACCATAACTAACACTAGCCATAACAATCATTCGCAATCTCACCCAGTATCCACTACCGAAACACTGAATCCTCACTTACATTTGAGTTACTATTTGTCTGTGGCAAAGAACGTTAATATAGAAGGCTGTTTGGAATTCGTTTTCTTATGCAAACTGAAGCAGACAAATTTGGTTCTATCTAAAGAAAAAAACATCTACTGA
- Protein Sequence
- MTETPEKHGEPILEPNLQVSAALEEVQPIAGEVAPTNNTTNVIPTSPQYGVAIIPNSATANDLATETVTPPTETLTDSTAKPADDKELHSTPSRNDRFKVVKIASLEPFKRGRWKCMDYVDEAPPVGATRVPQSSGSLQLSGCTYMQTQSLPQQQFQQMLLQSGFTNSAPFFANVQPQIMHQGQYYYPQIANVQNQTMQQVPNSIPAQFIANQPYFPAGVVPNAQGFTMQQGYSNVQYVPANLIQNQSSAFVPTSQPVQLPPNFQQSQSYAGQPNVSQTNVQPIMNGHTFTPQNEQVSGSLPTQTVKSVIMNSNNTQPPQVLQQNVQNVPVQNNQNILVAQGQQYQQQNAFQQNASNQQQSLASVVVPVQIQPATSQVAPVQSQTFDQNLPNNVYTNPQFAVSVSSLTVLENSENPTELNDTNSGGNVNVNENTEDPAKTNPVVNAIDNKIEQAMDLVKSHLMYTVREEVEVLKEKIAELMERIQQLESENNFLRSQIPKSQNLPPTPASSIQQSNIVINPNPNFPANPTSDTATITNTSHNNHSQSHPVSTTETLNPHLHLSYYLSVAKNVNIEGCLEFVFLCKLKQTNLVLSKEKNIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00436236;
- 90% Identity
- iTF_00910282;
- 80% Identity
- -