g50988.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- TSC22D1
- Assembly
- GCA_003013835.2
- Location
- ML016002.1:204773-206551[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-27 1.2e-22 82.4 1.5 1 47 483 529 483 534 0.96
Sequence Information
- Coding Sequence
- ATGAAATTATCATGTCGTTTTTCCGTAGGTCACCACCAGACCACGGGAAATATGACCGAAGTGGTAGAAAAGCATGGTGAGCAGATTTTAGAGCCAAATCTTCAAGTTTCTTCTGTCCTTGAAGAATTTCAGCCACCAGTTGGCGATGCTACTTCTACTAATAATACTACAAATGTGATACCCACCAGCACTCAGTACGGTGTCGCCATTATTCCGAACGCATCTACTGTAAATGATCTTGCAACAGAGACTGTCACGCCATCTACCGAAACGTTAACTGATACTACGTCAAAAGCGCCAGATGACAAGGAACTTCATTCCACGCCTAGTCGAAACGATAGATTTAAAGTAGTAAAAATTGCTAGTTTAGAACCTTTTAAACGTGGTCGTTGGAAATGTATGGACTATGTTGATGAAGCACCCCCGGTAGGAGCTGCTAGAGTGCCTCAATCATCGGGTAATATACAAGTTTCGGCAGGTACATTCATGCAAACTCAAAGTTTGCCACAGCAACAGTTTCAGCAAATGCTTTTACAAACTGGATTCACTAACGGTACTCAATTCTTTGCAAATGTTCCGCCACAGATGATTCCACAAGGTCAATACTTCTACCCGCAAGTAGCAAACGTGCAAAATCCCGCGATGCAACAAGTGCCAAATAGCATACCTGCTCAGTTCATTACAAATCAGCCATATTTCCCAGCAGGAGTTGTTCAAAATGCACAAGCCTTTACAATACCCCAAGGATATTCCAATGTACAGTATGTTCCTGCAAATCTCATTCAGAATCAAAATAGTGCATTTGTACCTACTTCATCACAACCAGTTCAATTACCACCAAATTTTCAACAAAGTCAGTCGTATGCAGGCCAACCTAATGTGTCACAAACGAATGTTCAGACGTTAATGAATGGTCATACCTTTACCCCCCAGAACGAGCAAGTTAGTGGGAGTTTATCTACACAGACTGTTAAAAGTGTAATAATGAACTCAAATAATACTCAGCCGGCTGTAAGTCAAACACAAGTTCTACAACAAAACCAAAACGTCCAGAATGTCCCAGTGCAAAGTAATCAAAATGTTATTGTTGCTCAAGGACAAGCGTATCAGCAACAGAGTGCATTTCCACAGAACACTGCAACTCAACAACAATCCGTTACTCCTGTTGTAGTTCCAGTCCAAGTCCAACCTGTGATTTCCACGTCACAGGTTGCCCCTGTGCAATCTCAAACGTTTGATCAAAGTTTAGCTAGTAATGTTTATACAAACCCTCAATTTGCTGTTAGTGTAAGTAGTTTGACTGTTCTTGATAATAGTAATAGTGAAAAGGCCACAGAACTGACGGAAACGCAGAGTGGCGGTAACGCGAATGTAAGTGAAAATGTGGATGATCCCTCTAAAACTAATCCTGTCGTTAATGCAATCGATAATAAAATAGAACAAGCTATGGATCTTGTAAAAAGCCATCTTATGTATACTGTTAGAGAGGAAGTGGAGGTATTGAAAGAGAAAATAGCTGAATTAATGGAGAGGATTCAGCAATTAGAAACTGAGAACAATTTTCTTAGATCTCAAATACCCAAGTCACAGAATGTACCATCAACACCTGCTTCTACTGTCCAACAATCCACTGTAGTCATTAATCCTAACTCTAATTTTTCTAATACTGCTCCAATAGTTGCATCAGAAACACCAACTGTAACTAATACTAGCCATAATCCTATCCCCAATACACAATCTCATTCAATATCCACCAGTGAAACACTGAATCCTCAGTAA
- Protein Sequence
- MKLSCRFSVGHHQTTGNMTEVVEKHGEQILEPNLQVSSVLEEFQPPVGDATSTNNTTNVIPTSTQYGVAIIPNASTVNDLATETVTPSTETLTDTTSKAPDDKELHSTPSRNDRFKVVKIASLEPFKRGRWKCMDYVDEAPPVGAARVPQSSGNIQVSAGTFMQTQSLPQQQFQQMLLQTGFTNGTQFFANVPPQMIPQGQYFYPQVANVQNPAMQQVPNSIPAQFITNQPYFPAGVVQNAQAFTIPQGYSNVQYVPANLIQNQNSAFVPTSSQPVQLPPNFQQSQSYAGQPNVSQTNVQTLMNGHTFTPQNEQVSGSLSTQTVKSVIMNSNNTQPAVSQTQVLQQNQNVQNVPVQSNQNVIVAQGQAYQQQSAFPQNTATQQQSVTPVVVPVQVQPVISTSQVAPVQSQTFDQSLASNVYTNPQFAVSVSSLTVLDNSNSEKATELTETQSGGNANVSENVDDPSKTNPVVNAIDNKIEQAMDLVKSHLMYTVREEVEVLKEKIAELMERIQQLETENNFLRSQIPKSQNVPSTPASTVQQSTVVINPNSNFSNTAPIVASETPTVTNTSHNPIPNTQSHSISTSETLNPQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00458626; iTF_00025797; iTF_00910282; iTF_00735244; iTF_01105329; iTF_00911602;
- 90% Identity
- -
- 80% Identity
- -