Basic Information

Gene Symbol
Kdm5
Assembly
GCA_030264535.1
Location
JARJEB010015671.1:12198-17671[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4e-23 1e-19 71.1 0.0 2 89 115 198 114 198 0.94
2 2 2.4 6e+03 -1.9 0.0 40 67 1013 1039 1011 1053 0.71

Sequence Information

Coding Sequence
ATGTCTAAAGAAGGCAAGACCATTCCACAAGAGATTTGTAATGGAGCATCGTCCCAGACGACGTCGCCCGTCAAGGAAAATCCACCAAACGGTTCTCGCGTTGGTACAACCGAATTCGAATTCATGGTCCCACCGGAGGCACCAGTCTTCACACCTTCGGAAGCTGAATTTGCTGAGCCCCTCGTATACATTGATAAAATAAGACCAATTGCTGAAAAGTATGGTATCTGCAAGATTAAACCACCAGCTAATTGGCAGCCACCATTTGCTGTGGACGTCGACAAATTAAAGTTTACACCACGCATTCAAAGACTTAACGAGCTTGAAGCGAAAACGAGAATCAAGTTGAACTTCTTGGACCAAATTGCCAAGTTCTGGGAGTTGCAAGGTTCGTCGTTGAAGATTCCTATGGTGGAGAAGCGGGCTCTCGATCTGTACACACTCCACAGACTCGTTGAGAATGAAGGAGGTTTCAATGCAGCTACCAAGGAGAGAAAATGGGCGAAAATTGCCGTGCTCATGGGTTATCCACACGGTAAAGGGACTGGTACAATATTAAAAACTCATTATGAACGCTTGATGTATCCTTATGAGTTATTTTCGAATGAAAAGAAGTCTGGTGAGGCATTGGGGCTAGAGGCATTGGACACCAAGGATGGCGAGTATAAACCACccacaaacacaaatagtAGTCCAAAGAAGAATGGTTACACTaagaaaaccaacaaaaatgCCAACAAGGAGAAGGAGAAGACCAAACTTAATGGGGACGTTGATATTAAACAGGAAGCTCCACCTCCTGAAGctgaaaaagatgaaaaagtCAAGTTAGGAGAGAAAAGTGATAATAAAGACGAAGTTGGTATTAAAGAATTAAGCAATGGAAATACTAATGCTACTGGAAATGGCCCTTCACCTGGAAAACTAAAATCACCGATAAAAGAAGAACCTGATGGCGATGCTGGAAGCAAGGAACTCAAGCGATTGCAATTTTACGGTGCCGGACCCAAGATGGCTGGATACAACGTAAAGAAACGTGCGGACGATAAAACACGAGGCAAAACCATTGacttccaattcgaatttgatcctTTGGCTAAATATATCTGTCACAATTGTCGACGGGGAGATGCGGAGGAACAAATGTTATTGTGCGATGGCTGCGATGATAGTTATcatacattttgtttgttgccACCGTTGGCAGAGATTCCCAAAGGCGATTGGTGTTGTCCACGGTGCGTTGCAGCCGAAGTGTCCAAACCTACTGAAGCTTTCGGTTTCGAACAAGCTCAACGAGAGTATAATTTGCAGCAATTTGGAGAGATGGCTGATACATTCAAGTCAGAATATTTCAATATGCCTGTTcatATGGTTCCAACGTCAATGGTTGAAAAAGAATTCTGGCGCATCGTTTCATCCATTGACGAAGACGTCACAGTTGAATACGGTGCAGATTTGCATACAATGGATCACGGTTCAGGCTTCCCTACCCAACAATCATTCAATCTGCAACCCGGAGATCAAGAATACGCTTCCACCGGATGGAACTTGAACAACTTACCAGTGTTAGAGGGCTCGGTACTTGGATATATCAACGCGGACATTTCCGGAATgaaaGTGCCGTGGATGTATGTTGGCATGTGTTTTGCGACATTCTGTTGGCATAACGAAGACCACTGGAGTTACTCCATCAATTACCTGCACTGGGGCGAACCCAAAACGTGGTACGGCGTGTCAGGAATGCAAGCCGAGCTGTTCGAAAAGACGATGAAGAGCGCTGCACCCGAATTATTCCATAGCCAACCGGATTTGTTGCATCAACTCGTCACTATTATGAATCCGAACATTTTGATGAATGCTGGGGTGAAAGTGTTTCGAACAGATCAACATGCTGGAGAGTTTGTTATTACCTTTCCTCGGGCTTACCACGCAGGCTTTAACCAAGGATATAATTTTGCTGAAGCTGTTAACTTTGCACCTGCTGACTGGATTGCAATGGGGCGTGAATGCGTCATGCATTATTCACAATTACGTCGATTCTGTGTCTTCTCCCACGACGAGTTGGTATGTAAAATGGCTACGAACTCAAATACATTGAACATTACTGTTGCCGCAGCGACTTACACCGATATGTTGAGAATGGTCGAGACTGAGAAGAAGTTACGAAAGAGCCTTTTGGATTGGGGAGTGACGAATGCTGAGAGGGAAGCATTTGAATTATTGCCAGATGACGAACGTCAATGCGAAATATGCAAAACCACGTGTTTCATGTCAGCGTTGACTTGCGAATGCACCACGGAAATGCTCGTTTGCCTCAGACACTATACATCATTATGTAAATGTCCCCCAAATAGACACACCTTGCGCTATCGATACACGTTAGATGAGCTGCTGCCCTTGCTTCGTAGTCTGAAGCAGAAAGCCGAATCGTTTGATCGATGGGCAGACAGCGTGAAAAAGGTGCTGGATCGTAAACATCCAAAGAGTGTCACCTTGAGTCGACTGCGCGCTTTGGCAGCTGAAGCAACCGGTAAAAGCTTTCCCAAATCTGATTTGGTGCAAACTCTAGCGAATGCAATTGAAGACGCGGAGAAATGCGCGAGTGTTATTAGGCAGCTTGACTTAAAAAAGGTCCGTACTCGTCATTCGTTCGATCAAAAGAATAAACTTACTTTGGAGGAATTGCGATTGTTTTATGAGGAAATTGATAGTTTAGCTTGTAttttagaagaagaaaagattATCAAAGAGCTTCTTGATCGGACAAATCATTTTGAAAATGAGGCGGATAGATTGTTGCGAATGGAATTGTCAGAGTGTCAATTGAAGGAAGTTGAGGATGCGATCAATATCAGTAATGAATTGTGTATAGATTTGCCTTCTTTGAAAGCCTTAACGGATCGACATAGTCAATTAAAATGGATCAAAGAGGTGTACGATTCGAGAAAGAAGTCTGGAGATATCGCCGATATCGAAACGCTGAAATCGCTTTTGAGAAAAGGTCTAGTTTTACCTGGGGATGGAATCATTGAAGTCATGCTTGGGGATATTCAGAATGTCATAACACAGGCAGAGGATTGGGAAAGTAAAGCACAAGCGTTGTTTAAAAAGACAAGTCCGGACATAATAATCGAAGctgaaaacttaataaaatcaGCAAGCGACATAGATGTTTACCTTCCAACAGAAAATTTACTTGTGGACAGCGTTAACAATGTCAACGCCTGGTATAAACAACTACAAGAAATGAATGCGTTAGAGTTTTATCCATATTTAGCTTCCATCGAAGAGTTGAtcaaaaaaagcaaaagttttccatttcaattggAAGAAGTCGATCGGTTAAAGTCTTATATCACTGGAGCGAATGGATGGAAAGATAAAACGGCCAAAACTTTTTTGAGAAAAAACACGACTAGTACTTTAATGGACGCTCTATCGCCTCGTTCGCAGATTATACAAACTCGTGGACGTAAACGCAACGGAGATGAAGGGCTCAAAGTTGTTGAGAATATGGATCCAGCCTCAGTGGTATCGGCGTTTAAAGATGCCGAAGATCGCGAATTGAGATTAATCGAAACGACTAGGAATACGAATCAAGCGAAAGTTTTAAGCAAAGAATCCGATTCGACTTTCTGCATATGCTTAAAACCCGCTACTGGATTAATGATGCAATGTGAGCTATGCAATGATTGGTTCCATTCAACCTGTGTGCAATTACCAAAAGTAAGTGGTCGTCGATTACGGAAGAATCTGAAGTCGGCAGCCATACATTACGGTTGCAAAGACTGCAAATTTTTATGTACAAATTGTAATCGGACGCGTCGGCCCCGACTCGAAACGATATTGTGTCTTTTGATGGCtttacaaaaacttttaacGCGACTTCCCGAAGGGGAAGCGCTGCAGTGCCTCACGGAACGAGCCATGAATTGGCAGGATCGTGCCCGGCAATTGCTAAGTCTACCTGATATCGCTGCAGCTACCGCTAAGATACAAACAATGACGCAAAAGTATAACGACACGGCAAAAACCAAGAAGGATAAGAACAACGGGGATTTGAAGAAGGGCAACAGTGATATAAGTAAAGATACTACTTTGAGTTGTATAAGTAGCGAAGATGAATCACAATCCGCACAAAGCGGTTTCTCGTCCGACGAGGAAGACTACAAGGAGGAACACGCGTATTCGATGAATTCCAAGTTAGGCGAAATCGATTTTTCAGTACAAATAAATGCAGAGACAAAGGAACTACTCAACGAACTCCTGACTGAAGGAGATATGCTTGAAGTATCTCTCGATGAGAATATGCAACTCTTCCAAGTTTCTTTTCTCGCTAGAGACTTTGATAAACATCcgaatattattgattttgattTGGCAGCGAAAGCACTAACACGCAAAGGGCGCAAGCGACGTTCCGAACCTGAGGAACCATCAAAGGCTAAAAAAGAAGTGATTGTGAATAAAAAAGCAAAGACCAAAAAGAATCAAAAGGAAACGACGAATGGGGTGAAACAGGTGAAGCGGAAGCGAAAGGGACGCGCTCGTAATTCGCAATCCAGCGACGAGGATGGCGATGAAGATGCAATGTGCGCCGTTTCAACGTGCCTCCAGCCGTCGGGGGATGAAGTTGACTGGGTGCAGTGCGACGGTGGTTGTGAACAGTGGTTCCATATGGCTTGTGTTGGCCTGTCGGCCAAGGACATTAACGAAGATGAAGATTACTATTGTTCGGCGTGTTCACCTCCAGAAACTGTTAAGGAAAGGTTAAAATTGGCTAATTCTAGTGACCTAGTTATAGAATATTAA
Protein Sequence
MSKEGKTIPQEICNGASSQTTSPVKENPPNGSRVGTTEFEFMVPPEAPVFTPSEAEFAEPLVYIDKIRPIAEKYGICKIKPPANWQPPFAVDVDKLKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLVENEGGFNAATKERKWAKIAVLMGYPHGKGTGTILKTHYERLMYPYELFSNEKKSGEALGLEALDTKDGEYKPPTNTNSSPKKNGYTKKTNKNANKEKEKTKLNGDVDIKQEAPPPEAEKDEKVKLGEKSDNKDEVGIKELSNGNTNATGNGPSPGKLKSPIKEEPDGDAGSKELKRLQFYGAGPKMAGYNVKKRADDKTRGKTIDFQFEFDPLAKYICHNCRRGDAEEQMLLCDGCDDSYHTFCLLPPLAEIPKGDWCCPRCVAAEVSKPTEAFGFEQAQREYNLQQFGEMADTFKSEYFNMPVHMVPTSMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTQQSFNLQPGDQEYASTGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVSGMQAELFEKTMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVKVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWIAMGRECVMHYSQLRRFCVFSHDELVCKMATNSNTLNITVAAATYTDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCEICKTTCFMSALTCECTTEMLVCLRHYTSLCKCPPNRHTLRYRYTLDELLPLLRSLKQKAESFDRWADSVKKVLDRKHPKSVTLSRLRALAAEATGKSFPKSDLVQTLANAIEDAEKCASVIRQLDLKKVRTRHSFDQKNKLTLEELRLFYEEIDSLACILEEEKIIKELLDRTNHFENEADRLLRMELSECQLKEVEDAINISNELCIDLPSLKALTDRHSQLKWIKEVYDSRKKSGDIADIETLKSLLRKGLVLPGDGIIEVMLGDIQNVITQAEDWESKAQALFKKTSPDIIIEAENLIKSASDIDVYLPTENLLVDSVNNVNAWYKQLQEMNALEFYPYLASIEELIKKSKSFPFQLEEVDRLKSYITGANGWKDKTAKTFLRKNTTSTLMDALSPRSQIIQTRGRKRNGDEGLKVVENMDPASVVSAFKDAEDRELRLIETTRNTNQAKVLSKESDSTFCICLKPATGLMMQCELCNDWFHSTCVQLPKVSGRRLRKNLKSAAIHYGCKDCKFLCTNCNRTRRPRLETILCLLMALQKLLTRLPEGEALQCLTERAMNWQDRARQLLSLPDIAAATAKIQTMTQKYNDTAKTKKDKNNGDLKKGNSDISKDTTLSCISSEDESQSAQSGFSSDEEDYKEEHAYSMNSKLGEIDFSVQINAETKELLNELLTEGDMLEVSLDENMQLFQVSFLARDFDKHPNIIDFDLAAKALTRKGRKRRSEPEEPSKAKKEVIVNKKAKTKKNQKETTNGVKQVKRKRKGRARNSQSSDEDGDEDAMCAVSTCLQPSGDEVDWVQCDGGCEQWFHMACVGLSAKDINEDEDYYCSACSPPETVKERLKLANSSDLVIEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
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