Basic Information

Gene Symbol
Kdm5
Assembly
GCA_027574885.2
Location
JAODGA020074048.1:1746000-1750648[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3e-26 1.2e-22 80.7 0.1 2 89 128 211 127 211 0.94
2 2 4.9 2e+04 -3.3 0.0 47 63 1066 1082 1065 1092 0.81

Sequence Information

Coding Sequence
ATGATGAGCAAGGACGATAAGAACGCGCCGGATGCGTGCGATAATGGGGCGGCCCCGgttaccaccaccaccacgacGGGGGCGGccggtggcggaggcggcggcggtggcaagGAGCACGCGAACGGTTCGCGGCTCGGCGGCAACGGCAGCTTCTCGTTTATTGTGCCCCCCGAGGCGCCCGTTTTCACGCCCACGGAGGCCGAGTTCCAGGAGCCGCTCGTCTACATCGACAAGATACGACCCATTGCTGAGAAGTATGGGATTTGTAAGATTAAGCCGCCTGCGAATTGGCAACCACCGTTTACGGTAGATGTCGATAAGTTAAAGTTTACGCCACGCATACAGCGTCTGAATGAACTGGAAGCAAAAACACGCGTCAAGCTAAACTTCCTCGATCAGATCGCCAAGTTTTGGGAGCTGCAGGGTTCGTCGTTGAAGATCCCCATGGTGGAGAAGCGCGCACTAGATTTGTATACGCTTCATCGACTTGTGGAGAATGAAGGTGGGTTTGCAACCGTCACAAATAGTAGAAAATGGGCGAAAATTGCGCAACATATGGGCTATCCTCATGGCAAAGGGACTGGTACGATTTTGAAGACACATTACGAACGTTTGTTATATCCTTATGAGGTTTTTACAAACGAAAAGAAGaagCCCACTGAACTTATAGAAGATATCAAAGAATCCAAAGACGATGACTACAAGCCACCAGTTACCGTGAATCCCTCTACCGGCAGTCCAAAGAAGAATGGCGTCATGCGGCGATCGCTGAAAAACGTCGATAAGAATAAGGACAGGAAGTGCAAAAGCGATCCGGATATCAAACAGGAGCCGTTTGACGACAAGGAAGATCAGAAGGAGAATAAGGATCGGGAGAAGGATGTCAAAGACGATCTCAAGGAGGTGAACGGCACCAAGCTGCGTTCGCCGATCAAGGACGAGGGTGAGGTGGGCAGCAAGGAGTTGAAGCGGCTGCAGTTCTTCGGCCCTGGCCCGAAGATGGCCGGCTTCAATGTGAGGAAGAAGGCGGACGATAAAACGCGTGGCAAGGTAGTTGATTATCAGTTTGATGCTGATCCCTTGGCGAAgtatatttgtcaaaattgtaaaCGCGGCGACGCCGAAGAGCAGATGCTGCTGTGCGATGGATGTGATGATAGTTATCACACGTTTTgcctgctgccgccgctggTGGAGATCCCCAAGGGGGATTGGTGCTGTCCGCGGTGCATCGCCGCGGAGGTGTCGAAGCCGACGGAGGCGTTCGGCTTTGAGCAGGCGCATCGCGAGTACAATCTGCAGCAGTTTGGCGAGATGGCCGACACGTTCAAGTCTGAGTATTTTAATATGCCTGTACATCTTGTACCGACATCTATGGTCGAAAAGGAGTTTTGGCGAATTGTTTCATCGATCGACGAGGACGTGACAGTTGAATATGGAGCGGATTTGCACACGATGGACCACGGATCAGGCTTCCCGACCAAGAATTCCATCAATTTGCAGCCGGGAGACCAGGAATATGCGTGTTCCGGGTGGAATTTGAATAACTTGCCGGTTTTGGAGGGTTCTGTGTTGGGTTATATCAATGCTGACATCTCTGGAATGAAGGTACCTTGGATGTATGTAGGCATGTGTTTTGCGACATTTTGCTGGCACAATGAAGACCACTGGAGTTACTCGATCAATTATCTGCATTGGGGTGAACCCAAGACGTGGTACGGCGTGTCTGGCATGCAGGCGGAGTTGTTTGAGAAGACGATGAAGAGCGCAGCGCCGGAGTTGTTTCATACCCAGCCGGACCTGCTGCATCAGCTGGTGACGATTATGAATCCGAATATTCTGATGAACGCCGGCGTTAAGGTTTTCCGCACGGATCAGCATGCTGGCGAGTTTGTCATCACGTTCCCACGAGCCTACCACGCTGGATTTAATCAAGGGTACAACTTTGCCGAGGCTGTTAATTTTGCGCCTGCTGATTGGATCGCCATGGGGCGTGAGTGTGTTATGCACTATTCACAACTACGGcggttttgtgtgttttcgCACGATGAACTCATCTGCAAGATGGCGACAAATTCGGACAAGTTGGATATTACGGTCGCTGCTGCCACCTACACGGACATGCTGAGAATGGTTGAGACTGAGAAGAAATTGCGCAAAAGTCTTTTGGATTGGgGAGTAACAAATGCCGAACGTGAGGCATTTGAATTGCTACCAGATGATGAACGACAGTGCGAGATCTGCAAGACGACGTGCTTCATGTCTGCGCTGACGTGTGAGTGCACGAAAGACATGCTCGTGTGTCTGCGACATTACTCATCGCTCTGTAAGTGCGCACCCAATAAGCACACACTTCGCTATCGCTACACTCTCGATGAACTGTTGCCGCTTTTACGAAGCCTGAAGCAGAAAGCGGAGTCGTTTGATCGGTGGGCCGATTGCGTGAAGAATGTCCTCGATAGAAAACACCCGAAGAGTGTCACTTTGGCCGATCTTCGCGCGCTGGCGGCGGAGGCCGAAGGTAAGAGCTTTCCCAAGTCGGATCTGTCGCAAACGCTTTCGAATGCAATCGAAGATGCGGAGAAGTGCGCCAGCGTTATACGACAGTTGGATTTGAAGAAGGTACGAACGCGGAACTCGTACGACCAGAAGAACAAACTTACCCTTGAGGAGCTACGACTCTTCTACGAAGAGATTGACAGTTTGGCCTGTGTACTCGACGAGGAGAAGATTATCAAAGAGTTGCTAGATCGGACAAATCACTTTGAAAGCGAAGCGGAGCGCTTGCTGAAGGTTGCCCTCTCGGATTGTAAGCTTAAGGATGTTGAGGATACAATCAACTCTAGTGATGAGCTGTGCATTGAGTTGCCATCACTTAAGGAGCTTACCAATCGTCATAGTCAATTAAAGTGGGTCAAGGAGGTGTTTGATGCTAGGAAAAAGTCTGGGGATATTGCCGATATTGAAACTCTGCAGGACTTATTGAGGAAAGGTGTTGTATTACCCAATGATACACTGATTGAGAGTATGCTGGGTGATATTCAGGGTGTTATCACGCAGGCGGAGGACTGGGAAGCGAAGGCGCAAGCTCTGTTTAAGAAAACCGGACAGGATATCATCGCCGAGGCGGAAACTTTGATCAAATCAGCGAGTAAAATCGACGTTTATCTCCCCACCGAAAACCTGCTGGTTGATAGTGTGAATAATGCCAAAGATTGGTATAAACTCCTGCACGAGATGAATTCATTAGAGTTTTATCCGTATCTGTCTTCAATTGAAGATCTCATTAAAAAGAGTAAGAGTTTTCCGTTTCAATTGGACGAAGTCGATCGTCTTAAGGGCTACGTGACGAATGCGAACGCGTGGAAGGAGAAGACGTCGAAAACCTTTCTGAGGAAAACGTCTTTGATTACGCTGATGGATGCACTGTCGCCGCGCTTGCAGATTGCTCCAGCAAAGGGTAAGAAACGCAACACCGACGAGGTTTTCAAGATTTCAGAGAATATGGATCAGGCTTCATTGGTGGCAGCTTTCAAGGAAGCGGAGGAACGCGAGATGAAGTTTATCGAAACGACGCGCACCACAAATCAGGCGAAAACGCTGAGTAAGGATTCAGAGTCGACGTTTTGTCTTTGCTGCAAACCGGCGGCAGGTTTGATGATGCAATGCGAGCTGTGTCAGGATTGGTTTCATCGCACCTGCGTTCAACTGCCGAAAATCACAGGTAGGCGTCTGCGAAAGAATTTGAAAGGATCTGCGCTGCATCTGGGGATTAAAGAGTGTAAGTTTTTGTGTTCGAATTGCAATCGCACGCGGCGGCCTCGATTAGAGACGATTTTGGGTCTACTTATGGCGCTGCAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGGTTAAATGA
Protein Sequence
MMSKDDKNAPDACDNGAAPVTTTTTTGAAGGGGGGGGKEHANGSRLGGNGSFSFIVPPEAPVFTPTEAEFQEPLVYIDKIRPIAEKYGICKIKPPANWQPPFTVDVDKLKFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLVENEGGFATVTNSRKWAKIAQHMGYPHGKGTGTILKTHYERLLYPYEVFTNEKKKPTELIEDIKESKDDDYKPPVTVNPSTGSPKKNGVMRRSLKNVDKNKDRKCKSDPDIKQEPFDDKEDQKENKDREKDVKDDLKEVNGTKLRSPIKDEGEVGSKELKRLQFFGPGPKMAGFNVRKKADDKTRGKVVDYQFDADPLAKYICQNCKRGDAEEQMLLCDGCDDSYHTFCLLPPLVEIPKGDWCCPRCIAAEVSKPTEAFGFEQAHREYNLQQFGEMADTFKSEYFNMPVHLVPTSMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSINLQPGDQEYACSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVSGMQAELFEKTMKSAAPELFHTQPDLLHQLVTIMNPNILMNAGVKVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWIAMGRECVMHYSQLRRFCVFSHDELICKMATNSDKLDITVAAATYTDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCEICKTTCFMSALTCECTKDMLVCLRHYSSLCKCAPNKHTLRYRYTLDELLPLLRSLKQKAESFDRWADCVKNVLDRKHPKSVTLADLRALAAEAEGKSFPKSDLSQTLSNAIEDAEKCASVIRQLDLKKVRTRNSYDQKNKLTLEELRLFYEEIDSLACVLDEEKIIKELLDRTNHFESEAERLLKVALSDCKLKDVEDTINSSDELCIELPSLKELTNRHSQLKWVKEVFDARKKSGDIADIETLQDLLRKGVVLPNDTLIESMLGDIQGVITQAEDWEAKAQALFKKTGQDIIAEAETLIKSASKIDVYLPTENLLVDSVNNAKDWYKLLHEMNSLEFYPYLSSIEDLIKKSKSFPFQLDEVDRLKGYVTNANAWKEKTSKTFLRKTSLITLMDALSPRLQIAPAKGKKRNTDEVFKISENMDQASLVAAFKEAEEREMKFIETTRTTNQAKTLSKDSESTFCLCCKPAAGLMMQCELCQDWFHRTCVQLPKITGRRLRKNLKGSALHLGIKECKFLCSNCNRTRRPRLETILGLLMALQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00902019;
90% Identity
-
80% Identity
-