Basic Information

Gene Symbol
Kdm5
Assembly
GCA_027574945.2
Location
JAODGD020022170.1:7055-12846[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.1e-25 2.1e-21 76.6 0.0 2 89 116 199 115 199 0.94
2 2 7.6 1.9e+04 -3.4 0.0 45 67 1301 1324 1288 1339 0.56

Sequence Information

Coding Sequence
ATGAGCAAGGACGACAAGAACGGCGCGGAAGCGTGCAATGGGGCGACGCAGCGCGGCGAGCCGCAGGGCTCCTCCAAGGAGCCGCCGCCGCACGGATCGCGCGTGGGCAGCGGCGGCTTCGAGTTCATCGTGCCGCCGGAAGCGCCCGTCTTCACGCCCACGGAGGCGGAGTTTCAGCAGCCGCTCGTCTACATCGACAAGATTCGGCCCGTCGCCGAAAAGTACGGCATTTGCAAAATCAAACCTCCGGCGAACTGGCAGCCCCCGTTTACGGTGGACGTTGATAAGTTGAAGTTCACGCCGAGAATACAGCGCCTCAATGAGCTGGAGGCGAAGACGCGCATCAAACTGAACTTCCTCGACCAGATCGCCAAGTTCTGGGAGCTGCAGGGCTCGTCGCTGAAAATTCCTATGGTGGAGAAGCGCGCGTTGGACCTGTACACGCTCCACCGGCTGGTCGAGAACGAGGGCGGCTTCGCGACGGTGACCAACGGCCGGAAGTGGGCCAAAATCGCCGTGCACATGGGCTATCCGCACGGGAAAGGCACCGGCACCATTCTGAAGACGCATTACGAACGCCTGCTGTACCCGTACGAATTGTTTACCAACGAGAAGAAGAAGCCCGGTGAGCTGCTCGAAGAGGTCAAACAACCAAAGGACGAAGATTACAAGCCGCCGGTGACGGTGAATCCGGTCACGGGCAGCCCGAAGAAGAACGGCGTAGTGCGCAGGTCCTTGAAGAGCGCCGAAAAGGGCAAGGAATTGCGGCGGACGAAAAGCAACGGTGACATGGACATTAAGCAGGAGCCGCGCGACGAGAAGGACGAGAAGCGCGACGACAAAGAGAATGCAGATACGGATCGCAAGGACGACGACGTCGAAGTGGACATCAAGGACGGCGTGACGGAGCTGAACGGGACAAAGCTGCGCTCCCCGATCAAGGACGAACCCGGGGAGGTCGGCAGCAAGGAATTGCGGCGTTTGCAGTTCTTCGGCGCCGGGCCCAAGATGGCCGGGTACAATCTGAAGAAGAAGGCCGACGACAAAACGCGCGGGAAGATCGTGGACTATCAGTTAGACGTCGATCCGCTGGCCAAGTACATTTGTCAAAACTGCAAGCGCGGCGACGCCGAAGAGCAAATGCTGCTCTGCGACGGTTGCGACGACAGCTATCACACGTTTTGTCTCATGCCACCCTTGGCCGAGATACCTAAGGGCGACTGGTGTTGTCCGCGATGCATCGCGGCGGAGGTGAGCAAACCGACGGAAGCTTTCGGCTTCGAACAGGCGCACCGAGAGTACAACCTGCAGCAGTTTGGCGAAATGGCAGACACTTTCAAGTCggaatattttaatatgcCCGTTCATCTCGTGCCTACTTCGATGGTGGAGAAGGAGTTCTGGAGGATCGTTTCGTCTATCGACGAAGACGTCACGGTGGAATATGGGGCGGATTTACACACGATGGATCATGGTTCGGGCTTTCCCACAAAGAACTCTATTAATTTACAACCGGGGGACCAGGAATACGCGTGTTCCGGTTGGAATTTGAATAATTTGCCCGTGCTGGAACGTTCGGTGTTGGGGTACATCAATGCGGATATTTCCGGAATGAAGGTCCCATGGATGTACGTCGGAATGTGCTTTGCGACGTTTTGCTGGCATAACGAAGACCACTGGAGCTACTCCATCAACTATCTGCACTGGGGAGAGCCGAAGACTTGGTACGGCGTGTCCGGTATGCAAGCAGAGCTGTTCGAAAAGACCATGAAGAGCGCCGCTCCCGAACTGTTCCACACCCAGCCCGATCTATTACATCAGCTCGTCACGATAATGAATCCTAACATTTTGATGAACGCGGGCGTGAAGGTCTTCCGCACCGACCAACACGCCGGCGAGTTTGTAATCACGTTTCCTCGAGCGTATCACGCCGGTTTTAACCAAGGGTATAACTTTGCGGAGGCTGTGAATTTTGCTCCTGCCGACTGGATAGCCATGGGAAGGGAATGCGTCATGCATTATTCCCAACTCCGACGATTCTGCGTCTTTTCTCACGACGAGCTCGTCTGCAAAATGGCGACAAATTCGGATAAACTGGACATTACCGTCGCTGCCGCGACGTACACGGACATGCTGCGGATGGTCGAGACTGAAAAGAAGTTGAGGAAGAGTTTGTTAGATTGGGGCGTGACTAACGCCGAACGCGAGGCATTCGAATTGCTCCCGGATGACGAACGACAATGCGAAATATGCAAAACGACGTGCTTCATGTCCGCGCTGACGTGCGAATGCACGAAGGAACAACTCGTCTGCCTTCGGCACTACACGTCGCTCTGCAAGTGCGCGCCGAATAAACACACACTGCGCTACAGATATACGCTCGACGAGTTGCTACCCCTGCTGCGTAGTCTCAAACAGAAAGCGGAGTCGTTCGACCGTTGGGCGGACTGCGTGAAAAAAGTCCTCGATCGCAAGCACCCGAAGAGCGTGATGTTGAACGAACTGCGCGCCCTCGCCGCTGAGGCCGAGGGCAAGAGTTTCCCAAAGTCTGATTTGATGCAGACGCTTGCAAACGCCATAGAAGATGCCGAGAAGTGTGCCAGTGTCATACGGCAGCTCGACCTGAAGAAGGTGCGCACGCGGCATTCGTACGATCAGAAAAACAAACTCACATTAGAGGAATTACGCCTGTTCTACGAGGAGATCGATAGTTTGGCTTGCATTCTCGACGAGGAGAAGATCATCAAGGACCTTCTCGATCGCACCAATCGTTTTGAGCAGGAAGCCGAGCGATTGCTGCAAATCACGCTGTCCGATTGCAAGCTGAAAGATGTCGAAGACACGATCGAGTCTAGCAATGAGCTTTGCGTCGAACTACCGACGCTGAAAGCGTTGACGGATCGGCACAATCAATTGAAGTGGGTTAAGGAGGTGTACGACGCGCGGAAAAAGTCCGGAGATATCGCAGACATCGAGACGTTGCAAGAGTTACTCCGGAAAGGCGTAGTATTGCCGAACGATTTGCTGATTGAAAGCATGCTGGGTGATATACAAGGCGTAATAACGCAGGCGGAGGATTGGGAGGCAAAGGCCCAGGCTTTGTTTAAGAAAACCGGCCCCGATGTGCTCTCCGACGCCGAGAACTTGATCAAGGCTGCGAATAAGATCGACGTTTATCTTCCCACCGAGAATCAGTTGGTCGACAGTGTGAATAATGTCAAAGACTGGTATAAACTATTGCAGGAGATTAATTCGCTCGACTTTTATCCGTATTTGTCTTCGATCGAGGACCTGATCAAGAAGTCGAAGAGCTTTCCCTTCCAGCTGGAGGAAGTCGATCGGCTTAAGAGCTACGTGAAGGGGGCCAACGAATGGAAGGACAAGACGTCGAAGACATTTCTGCGCAAGAACGCGACGATCGCTCTAATGGACGCGCTCTCGCCCCGATCTCAGATAGCGCCGCCGAAAGGCAGGAAGAGGAACATCGAGGACGTGTTTAAGATCACGGAGAATATGGATCAGGCCTCGCTGGTGGCGGCGTTCAAAGACGCCGAGGACAGGGAGATGAAGTTCATCGAGACGACGCGATTGGCGAATCAGGCGAAGGTTTTGACGAAAGAGTCGGACTCGACGTTTTGCACGTGCGGCAAGCCCGCGTCGGGACTGATGATGCAATGCGAACTGTGCAACGACTGGTTCCATTCCGGCTGCGTGCAATTGCCCAAAGTGAGCGGGCGACGGTTGCGGAAGAACATGAAAGCTTCCGGGATTCACATCGGCTTCAAGGAGTGCAAGTTCCTGTGCACGAATTGCAATCGGACGCGGCGGCCGCGTCTCGAGACGATTCTGTGCCTGCTCATGGCGCTGCAAAAGCTGCTCACGAGGATACCCGAGGGGGACGCGTTGCAGTGCTTGACCGAGCGCGCCATGAATTGGCAGGATCGGGCGCGACAGATGCTGAATCATCCGGACGTCGCCGCCGCGCTGGCGAAGATCAAGACCATGACGCAGAAGTACAACGATACGAAATCGAAACACGATAAGAACGGCGACGCGAAGAAAGCGGATAGGGATGTGTCGGGGACGTCGATGAGTAGCGAGGACGATTCGCAATCGGCGATGAGCAGCATATCCTCGGACGAGGAGGACTGCAAAGAGGAGCACGCGTACTCGATGCATTCCAAGATTATGGAGAACGATTTCAGCGTGCAGTTGAAGCAGGACACGCGCGAGTTATTGACGGAGCTGCTGGTCGAAGGCGATATGCTGGAGGTGTCGCTGGACGAGAACCTGCAACTGTTTCAGGTCGCCTTCATGTCTAGAGATTATACGAAGTGTCCGAACATTATCGATTTTGATATCGCAGCGAAAACCCAGCCCAGGAAGGGACGAAAACGACGATCCGAGACCGAGGAGCCCGCCGCCAAGAAGAAAGAAATCGCCGGAATCAAGAAACCGAGGATGAAGCGGGGTCAAAAGGAGCCCGCCGGCAACGGCCTCAAGGCGCCCGCCGCGGCCGCGCGAAAACGCAAGGGGCGCGCGCGCAACTCGCAATCGAGCTCGGACGAGGACGCCGACGAGGACGCCATGTGCGCGGTGGCCAAGTGCCTCAAGCCCGTCGGCGACGAAGTCGACTGGGTGCAGTGCGACGGCGGTTGTGAGCAGTGGTTCCACATGGCGTGCGTCGGCCTGTCGGCGAAAGACATTAACGAGGACGAGGATTACTACTGCTCGGCGTGCTCGCCCCCCGAAACCGTCAAGGAACAACTGAAGTTGGCCAACTCCAGCGAGCTAGTTATAGAATATTGA
Protein Sequence
MSKDDKNGAEACNGATQRGEPQGSSKEPPPHGSRVGSGGFEFIVPPEAPVFTPTEAEFQQPLVYIDKIRPVAEKYGICKIKPPANWQPPFTVDVDKLKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLVENEGGFATVTNGRKWAKIAVHMGYPHGKGTGTILKTHYERLLYPYELFTNEKKKPGELLEEVKQPKDEDYKPPVTVNPVTGSPKKNGVVRRSLKSAEKGKELRRTKSNGDMDIKQEPRDEKDEKRDDKENADTDRKDDDVEVDIKDGVTELNGTKLRSPIKDEPGEVGSKELRRLQFFGAGPKMAGYNLKKKADDKTRGKIVDYQLDVDPLAKYICQNCKRGDAEEQMLLCDGCDDSYHTFCLMPPLAEIPKGDWCCPRCIAAEVSKPTEAFGFEQAHREYNLQQFGEMADTFKSEYFNMPVHLVPTSMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSINLQPGDQEYACSGWNLNNLPVLERSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVSGMQAELFEKTMKSAAPELFHTQPDLLHQLVTIMNPNILMNAGVKVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWIAMGRECVMHYSQLRRFCVFSHDELVCKMATNSDKLDITVAAATYTDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCEICKTTCFMSALTCECTKEQLVCLRHYTSLCKCAPNKHTLRYRYTLDELLPLLRSLKQKAESFDRWADCVKKVLDRKHPKSVMLNELRALAAEAEGKSFPKSDLMQTLANAIEDAEKCASVIRQLDLKKVRTRHSYDQKNKLTLEELRLFYEEIDSLACILDEEKIIKDLLDRTNRFEQEAERLLQITLSDCKLKDVEDTIESSNELCVELPTLKALTDRHNQLKWVKEVYDARKKSGDIADIETLQELLRKGVVLPNDLLIESMLGDIQGVITQAEDWEAKAQALFKKTGPDVLSDAENLIKAANKIDVYLPTENQLVDSVNNVKDWYKLLQEINSLDFYPYLSSIEDLIKKSKSFPFQLEEVDRLKSYVKGANEWKDKTSKTFLRKNATIALMDALSPRSQIAPPKGRKRNIEDVFKITENMDQASLVAAFKDAEDREMKFIETTRLANQAKVLTKESDSTFCTCGKPASGLMMQCELCNDWFHSGCVQLPKVSGRRLRKNMKASGIHIGFKECKFLCTNCNRTRRPRLETILCLLMALQKLLTRIPEGDALQCLTERAMNWQDRARQMLNHPDVAAALAKIKTMTQKYNDTKSKHDKNGDAKKADRDVSGTSMSSEDDSQSAMSSISSDEEDCKEEHAYSMHSKIMENDFSVQLKQDTRELLTELLVEGDMLEVSLDENLQLFQVAFMSRDYTKCPNIIDFDIAAKTQPRKGRKRRSETEEPAAKKKEIAGIKKPRMKRGQKEPAGNGLKAPAAAARKRKGRARNSQSSSDEDADEDAMCAVAKCLKPVGDEVDWVQCDGGCEQWFHMACVGLSAKDINEDEDYYCSACSPPETVKEQLKLANSSELVIEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00902019;
90% Identity
iTF_00631922;
80% Identity
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