Basic Information

Gene Symbol
Kdm5
Assembly
GCA_027574965.2
Location
JAODGE020020628.1:1893-7567[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.4e-25 1.9e-21 76.6 0.0 2 89 117 200 116 200 0.94
2 2 6 1.7e+04 -3.4 0.0 45 67 1302 1325 1289 1340 0.56

Sequence Information

Coding Sequence
ATGAGCAAGGACGACAAGAACGGCGCGGACGCGTGCGACGTgccggcgcagcgcggcgagccCCACGGCGCCTCCAAGGAGCTGCCGCCGAACGGAtcgcgcgtgggcggcggcggcggcttcgagTTCATCGTGCCGCCGGAAGCGCCCGTCTTCACGCCCACGGAGGCCGAGTTTCAGCAGCCGCTCGTCTACATCGACAAGATTCGGCCCGTCGCCGAAAAGTACGGCATTTGCAAAATCAAACCGCCGGCGAACTGGCAGCCGCCGTTTACGGTGGACGTTGATAAGCTGAAGTTCACGCCGAGAATACAGCGCCTCAATGAACTGGAAGCCAAGACGCGCATCAAGCTGAACTTCCTCGACCAGATCGCCAAGTTCTGGGAGCTGCAGGGCTCCTCGCTGAAGATCCCCATGGTGGAGAAGCGCGCCTTGGACCTGTACACGCTGCATCGGCTGGTCGAGAACGAGGGCGGCTTCGCGACGGTGACGAACGGCCGCAAGTGGGCGAAAATCGCCGTGCACATGGGCTATCCGCACGGGAAGGGCACCGGCACCATTCTGAAGACGCACTACGAGCGCTTGCTGTACCCGTACGAATTGTTTACCAACGAGAAGAAGAAGCCCGGCGAGCTGCTCGAGGAGCTCAAGGTGCTCAAGGAGCCGAAGGACGACGATTACAAGCCGCCGGTGACGGTGAATCCGGCGACGGGCAGTCCGAAGAAGAACGGCGTCGTGCGCAGGTCGTTGAAGGGCGCCGAAAAGGGCAAGGAATTGCGGCGGACGAAGAGCAACGGCGACATCGACGTCAAGCAGGAGCCGTGCGACGAGAAGGACGAGAAGCGCGACGACAAGGAGAACGCGGACAAggagcgcgacgtcgacgccgacgacaggGACGGCGCGAAGGACCTGAACGGCGCGAAGCTGCGCTCGCCGATCAAGGACGAGCCGGGCGAGGTGGGCAGCAAGGAGCTGAGGCGTTTGCAGTTCTTCGGCGCCGGGCCCAAGATGGCCGGGTACAATCTGAAGAAGAAGGCCGACGACAAGACGCGCGGCAAGATCGTGGACTATCAGTTCGACGTCGATCCGCTAGCGAAGTACATTTGTCAAAACTGcaagcgcggcgacgccgaagagcAAATGCTGCTCTGCGACGGTTGCGACGACAGCTATCACACGTTCTGCCTCATGCCACCCTTGGCCGAGATACCTAAGGGCGACTGGTGTTGTCCGAGGTGCATCGCGGCGGAGGTGAGCAAGCCGACGGAGGCGTTCGGCTTCGAGCAGGCGCACCGCGAGTACAACCTGCAGCAGTTCGGCGAAATGGCGGACACTTTCAAGTCGGAATACTTCAATATGCCCGTTCATCTCGTGCCTACTTCGATGGTGGAGAAGGAGTTCTGGAGGATCGTTTCGTCGATCGACGAAGACGTCACCGTGGAATATGGGGCGGATTTGCACACGATGGATCATGGTTCGGGCTTTCCCACGAAGAACTCCATCAATTTACAGCCGGGCGACCAGGAATACGCGTGTTCCGGCTggaatttgaacaatttgccCGTGTTGGAACGTTCGGTGCTCGGGTACATCAATGCGGATATTTCCGGAATGAAGgTTCCTTGGATGTACGTCGGAATGTGCTTCGCGACGTTTTGCTGGCACAACGAAGACCACTGGAGCTACTCCATCAACTATCTGCACTGGGGTGAGCCGAAGACGTGGTACGGCGTGTCCGGCATGCAGGCGGAGCTGTTCGAGAAGACGATGAAGAGCGCCGCGCCCGAACTGTTCCACACCCAGCCCGATCTGTTGCATCAGCTCGTCACGATAATGAATCCGAACATTCTGATGAACGCGGGCGTGAAGGTCTTCCGCACCGACCAACACGCCGGCGAGTTCGTCATCACGTTTCCGCGAGCGTATCACGCCGGTTTTAACCAAGGGTATAACTTTGCGGAGGCCGTGAATTTCGCCCCGGCGGATTGGATAGCCATGGGACGCGAATGCGTCATGCATTATTCTCAGCTGCGACGATTCTGCGTCTTTTCTCACGACGAGCTCGTCTGCAAGATGGCGACGAATTCGGACAAGCTGGAcatcaccgtcgccgccgcgacgtacACGGACATGCTGCGCATGGTCGAGACCGAGAAGAAGTTACGGAAGAGCCTGTTGGATTGGGGCGTgacgaacgccgaacgcgaggCGTTCGAACTGCTCCCGGACGACGAGCGACAGTGCGAAATATGCAAGACGACGTGCTTCATGTCGGCGCTGACGTGCGAATGCACGAAGGAACAACTCGTCTGCCTGCGGCACTACACGTCGCTGTGCaagtgcgcgccgaacaaGCACACGCTGCGCTACAGATACACCCTCGACGAGTTGCTGCCCCTGCTGCGTAGCCTCAAGCAGAAAGCGGAGTCGTTCGACCGCTGGGCGGACTGCGTGAAGAAGGTGCTCGATCGCAAGCACCCGAAGAGCGTCACGCTGAACgaactgcgcgcgctcgccgccgaggccgAGGGCAAGAGTTTCCCCAAGTCCGATTTGATGCAGACGCTCGCGAACGCCATCGAAGACGCCGAGAAGTGCGCCAGCGTCATACGGCAGCTCGACCTGAAGAAGGTGCGCACGCGGCACTCGTACGACCAGAAGAACAAGCTCACGCTGGAGGAGTTGCGCCTGTTCTACGAGGAGATCGACAGTTTGGCGTGCATTCTCGACGAGGAGAAGATCATCAAGGATCTTCTCGATCGCACCAATCATTTCGAGCGCGAAGCGGAACGATTGCTGCAAATCGCGCTGTCCGATTGCAAGCTGAAAGATGTCGAAGACACGATCGAGTCCAGCAACGAGCTGTGCGTCGAACTGCCGACGCTGAAAGCGTTGACCGATCGGCACAATCAGCTGAAGTGGGTTAAGGAGGTGtacgacgcgcggaaaaagtCCGGAGACATCGCGGACATCGAGACGCTGCAAGCGTTACTGCGAAAAGGCGTCGTACTGCCGAACGACTTGCTGATTGAAAGCATGCTGGGCGATATACAAGGCGTGATAACGCAGGCGGAGGATTGGGAGGCAAAGGCGCAGGCTCTGTTTAAGAAAACCGGCCCcgacgtgctcgccgacgccgagagCTTGATCAAGGCGGCGAGTAAGATCGACGTTTATCTTCCCACCGAGAACCAGTTGGTCGACAGCGTGAACAACGTCAAAGACTGGTATAAACTGTTGCAGGAGATTAATTCGCTCGACTTTTATCCATACCTGTCGTCGATCGAGGACCTCATCAAGAAGTCGAAGAGCTTTCCGTTCCAGCTGGAGGAGGTCGATCGGCTCAAGAGCTACGTGAAGGGGGCCAACGAATGGAAGGACAAGACGTCGAAGACGTTTCTGCGCAAGAACGCGACGATCGCCCTGATGGACGCGCTCTCGCCCCGATCTCAGATAGCGCCACCGAAGGGCAGGAAGCGCAACATCGAGGACGTGTTCAAGATCACGGAGAACATGGATCAGGCCTCGCTGGTGGCGGCGTTCAAGGACGCCGAGGACAGGGAGATGAAGTTCATCGAGACGACGCGACTGGCGAATCAGGCGAAGGTGCTGACGAAAGAGTCGGACGCGACGTTCTGCACGTGCGGCAAGCCCGCGTCGGGACTGATGATGCAATGCGAACTGTGCAACGACTGGTTCCATTCCGGCTGCGTGCAATTGCCCAAAGTGAGCGGACGGCGCCTGCGGAAGAACATGAAGGCGTCCGGCATTCACATCGGCTTCAAGGAGTGCAAGTTCCTGTGCACGAACTGCAATcggacgcggcggccgcgtctcGAGACGATACTCTGTCTCCTCATGGCGCTGCAAAAGCTGCTCACGCGGATACCCGAGGGGGACGCGCTGCAGTGCCTGACCGAGCGCGCGATGAATTGGCAGGATCGGGCGCGACAGATGCTGAACCATccggacgtcgccgccgccctggcGAAGATCAAGACCATGACGCAGAAATACAACGACACGAAGTCGAAGCACGACAAgaacggcgacgcgaagaagcCGGACAAGGACGTGTCGGGCACGTCGATGAGCAGCGAGGACGATTCGCAATCGGCGATGAGCAGCATGTCGTCGGACGAGGAGGACTGCAAAGAGGAGCACGCCTACTCGATGCACTCGAAGATAATGGAGAACGATTTCAGCGTGCAGCTGAAGGAGGACACGCGAGAGTTGCTGACGGAGCTGCTGGTCGAAGGCGACATGCTGGAGGTGTCTCTGGACGAAAACCTGCAGCTGTTTCAGGTCGCCTTCATGTCCAGGGATTATGCGAAGTGTCCGAACATAATCGATTTTGATATCGCGGCGAAGACGCAGCCGAGGAAGGGACGAAAACGACGGTCCGAGGCCGACGAGCCCGCCGCCAAGAAGAAGGAAATCGCCGGCGTGAAGAAACCGAAGGTGAAGCGCGGCCAAAAggagcccgccgccgccgcgcgaaaacgcaaggggcgcgcgcgcaattcgcaaTCGAGctcggacgacgacgccgacgaggacgccaTGTGCGCGGTGGCCAAGTGCCTCAAgcccgtcggcgacgaggtcgACTGGGTGCAGTGCGACGGCGGCTGTGAGCAGTGGTTTCACATGGCGTGCGTCGGCCTGTCGGCGAAGGACATTAACGAGGACGAGGACTACTACTGCTCGGCGTGCTCGCCTCCCGACACCGTCAAGGAACAATTAAAGCTggccaacgccgccggcgagctggTTATAGAATATTGA
Protein Sequence
MSKDDKNGADACDVPAQRGEPHGASKELPPNGSRVGGGGGFEFIVPPEAPVFTPTEAEFQQPLVYIDKIRPVAEKYGICKIKPPANWQPPFTVDVDKLKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLVENEGGFATVTNGRKWAKIAVHMGYPHGKGTGTILKTHYERLLYPYELFTNEKKKPGELLEELKVLKEPKDDDYKPPVTVNPATGSPKKNGVVRRSLKGAEKGKELRRTKSNGDIDVKQEPCDEKDEKRDDKENADKERDVDADDRDGAKDLNGAKLRSPIKDEPGEVGSKELRRLQFFGAGPKMAGYNLKKKADDKTRGKIVDYQFDVDPLAKYICQNCKRGDAEEQMLLCDGCDDSYHTFCLMPPLAEIPKGDWCCPRCIAAEVSKPTEAFGFEQAHREYNLQQFGEMADTFKSEYFNMPVHLVPTSMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSINLQPGDQEYACSGWNLNNLPVLERSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVSGMQAELFEKTMKSAAPELFHTQPDLLHQLVTIMNPNILMNAGVKVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWIAMGRECVMHYSQLRRFCVFSHDELVCKMATNSDKLDITVAAATYTDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCEICKTTCFMSALTCECTKEQLVCLRHYTSLCKCAPNKHTLRYRYTLDELLPLLRSLKQKAESFDRWADCVKKVLDRKHPKSVTLNELRALAAEAEGKSFPKSDLMQTLANAIEDAEKCASVIRQLDLKKVRTRHSYDQKNKLTLEELRLFYEEIDSLACILDEEKIIKDLLDRTNHFEREAERLLQIALSDCKLKDVEDTIESSNELCVELPTLKALTDRHNQLKWVKEVYDARKKSGDIADIETLQALLRKGVVLPNDLLIESMLGDIQGVITQAEDWEAKAQALFKKTGPDVLADAESLIKAASKIDVYLPTENQLVDSVNNVKDWYKLLQEINSLDFYPYLSSIEDLIKKSKSFPFQLEEVDRLKSYVKGANEWKDKTSKTFLRKNATIALMDALSPRSQIAPPKGRKRNIEDVFKITENMDQASLVAAFKDAEDREMKFIETTRLANQAKVLTKESDATFCTCGKPASGLMMQCELCNDWFHSGCVQLPKVSGRRLRKNMKASGIHIGFKECKFLCTNCNRTRRPRLETILCLLMALQKLLTRIPEGDALQCLTERAMNWQDRARQMLNHPDVAAALAKIKTMTQKYNDTKSKHDKNGDAKKPDKDVSGTSMSSEDDSQSAMSSMSSDEEDCKEEHAYSMHSKIMENDFSVQLKEDTRELLTELLVEGDMLEVSLDENLQLFQVAFMSRDYAKCPNIIDFDIAAKTQPRKGRKRRSEADEPAAKKKEIAGVKKPKVKRGQKEPAAAARKRKGRARNSQSSSDDDADEDAMCAVAKCLKPVGDEVDWVQCDGGCEQWFHMACVGLSAKDINEDEDYYCSACSPPDTVKEQLKLANAAGELVIEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00902019;
90% Identity
iTF_00631292;
80% Identity
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